Cytochrome oxidase gene sequencing reveals channel catfish ovary cell line is contaminated with brown bullhead cells

The channel catfish (Ictalurus punctatus, Rafinesque) ovary (CCO) cell line is the standard cell line used for channel catfish diagnostics. Next‐gen sequencing studies of a virus cultured in the CCO cells revealed mitochondrial sequences matching those of brown bullhead (Ameiurus nebulosus, Lesueur). Therefore, we systematically performed partial cytochrome oxidase 1 gene sequencing of several sources of the CCO cell line and all matched the brown bullhead and not the channel catfish.     

Genetic analysis and QTL mapping of growth period traits and plant height traits in soybean recombinant inbred lines from Dongnong 47 × PI 317334-B

High and stable yield is the main goal of soybean genetic improvement. In this study, association analysis was used to detect the quantitative trait loci (QTL) for the plant height, and soybean growth period using 182 SSR markers in the RIL population of 136 F_4:8 lines, which developed from a cross between photoperiod-insensitive cultivar ‘Dongnong 47’ and photoperiod-sensitive variety PI317334–B. The results showed that 33 QTLs related to soybean growth period and plant height traits were detected by compound interval mapping, and were located on 12 linkage groups including N, C1, C2, J, D1a, B2, E, G, A2, O, L, I, with the contribution rate of 7.85–33.84%. These QTL loci and linkage markers related to soybean photoperiod sensitivity, would be helpful to identify key genes that control soybean photoperiod sensitivity, and provide an important basis for the breeding of new photoperiod-insensitive soybean varieties based on molecular design breeding.     

Nitrogen fertilization affects yields and storage compound contents in seeds of field-grown soybeans cv Enrei (Glycine max. L) and its super-nodulating mutant En-b0-1 through changing N2 fixation activity of the plants

ABSTRACT

We compared the protein and oil contents, seed yields, and natural abundance of ¹⁵N (σ¹⁵N) of seeds from the plants of the cultivar Enrei, which has moderate nodulating ability (Enrei) with those of its two near-isogenic lines (NILs), a super-nodulating genotype of Enrei, i.e., En-b0-1, and a non-nodulating genotype of Enrei, i.e., En1282. Plants of these three genotypes were grown on four types of field plots with different types of urea coated slow-release nitrogen (N) fertilizers (CUSLNFs) which delivered N in different manners during plant growth . The seed yield of the En1282 plants was similar to that of the Enrei plants but much greater than that of the En-b0-1 plants when the plants were grown on the field to which a CUSLNF with a long lifespan was applied. The amounts of protein per seed were positively correlated with those of oil per seed in the case of En1282 plants irrespective of the field N conditions. The seed protein contents were proportional to the seed weight in both En1282 and Enrei plants. Such a relationship was not observed in the En-b0-1 plants, and the protein and oil contents in the seeds of En-b0-1 plants were negatively correlated with each other. These observations suggested that the N supply to maturing seeds was a key to the protein contents in the En1282 and Enrei plants and that the C supply to maturing seeds was a key to the protein contents in the En-b0-1 plants. The comparison of the σ¹⁵N values, protein contents, and seed yields of seeds from En1282 plants suggested that the Enrei plants assimilated considerable amounts of N from the soil during the late plant growth. We concluded that high N₂ fixation activity depressed the amounts of oil per seed and changed the protein and oil contents in soybean seeds.     

黄淮和长江中下游冬麦区小麦品种(系)农艺性状及其聚类分析

气候变暖对我国乃至世界小麦育种和生产有很大影响。为了研究我国不同生态麦区小麦品种(系)农艺性状适应气候变化调控机理,本研究以黄淮冬麦区北片和南片及长江中下游冬麦区的20个当前大面积推的小麦品种、新审定品种和新选育品系为试验材料,在黄淮冬麦区北片河北省石家庄市种植,在返青期前对其抗旱抗冻性、根冠比和叶片干重与鲜重比进行调查;收获后对株高、穗长、穗下节间长、分蘖数、小穗数、穗粒数、千粒重、单株生物量、单株粒重、经济系数等10个农艺性状进行了考种和相关、聚类和主成分分析。结果表明,不同麦区小麦品种(系)苗期的抗旱抗冻性为黄淮冬麦区北片黄淮冬麦区南片长江中下游冬麦区。三大生态麦区的单株粒重与分蘖数、穗粒数、单株生物量、经济系数均呈极显著正相关,黄淮冬麦区南片和长江中下游冬麦区呈显著和极显著的农艺性状相对较多,说明这两个生态麦区的品种有很大的相似性;但不同生态麦区其他农艺性状正负相关各有一定差异。在欧氏距离20处,20个小麦品种(系)被聚类为长江中下游冬麦区和黄淮冬麦区南片品种(系)(第Ⅰ类)及黄淮冬麦区北片品种(系)(第Ⅱ类)两个大的生态型;在欧氏距离6处,Ⅰ类又分为分别以‘百农207’‘济麦22’和‘西农979’为代表的3个亚类,Ⅱ类是以‘长旱58’为代表。产量、穗长、株高和经济系数4个主成分因子对10个农艺性状表现型变异累计贡献率为76.39%。‘济麦22’等黄淮冬麦区北片的品种(系)综合得分在前20株中占95%。以上研究结果为小麦适应气候变暖育种和引种示范推广提供了重要参考信息。     

水稻复合农艺性状QTL剖析

为了解水稻复合性状的数量性状基因座(QTL),在利用单片段代换系进行QTL鉴定的基础上,剖析了水稻株高QTL与主茎高和穗长QTL,主茎高与倒一节间长、倒二节间长、倒三节间长和倒四及以下节间长QTL,谷粒长宽比QTL与粒长和粒宽QTL,每穗粒数QTL与一次枝梗数和二次枝梗数QTL的关系。结果表明:鉴定出株高QTL的6个单片段代换系中有4个只检测出了主茎高QTL,其加性效应百分率为86.00%～99.55%,有1个只检测出了穗长QTL,其加性效应百分率为48.31%,有1个同时检测出了主茎高QTL和穗长QTL,其中主茎高QTL的加性效应百分率为81.72%,穗长QTL加性效应百分率为18.28%;在检测出主茎高QTL的7个单片段代换系中,有1个只检测出倒一节间长QTL,有2个只检测出倒二节间长QTL,有2个检测出倒一节间长QTL和倒二节间长QTL,有2个只检测出倒三节间长QTL;不同的单片段代换系中检测出的节间长的QTL加性效应百分率变化范围为-128.62%～172.07%;7个检测出谷粒长宽比QTL的单片段代换系中,有5个只检测出粒长QTL,1个只检测出粒宽QTL,1个同时检测出了粒长QTL和粒宽QTL;检测出每穗粒数QTL的3个单片段代换系中,有2个只检测出二次枝梗数的QTL,有1个同时检测出一次枝梗数QTL和二次枝梗数的QTL。这些结果表明,代换片段中如能检出复合性状QTL,也可以检出其构成性状QTL;复合性状QTL的加性效应的大部分可由其构成性状QTL的综合效应来解析,但相同的复合性状,不同代换片段检出的构成性状QTL不同。     

鸡胚及禽类细胞系在生物医药领域的应用及研究进展

鸡胚因发育过程清楚，长久以来作为基础和应用科学研究领域重要的实验模型，尤其在鸡胚发育早期绒毛尿囊膜阶段，因其血管丰富，是天然的免疫缺陷宿主，是病理学、药理学和肿瘤学等研究领域的理想实验模型。作者简述了发育早期的鸡胚组织结构，并介绍了鸡胚绒毛尿囊膜在肿瘤研究、血管生成、器官移植、烧伤等疾病机理研究中的应用，以及在鸡胚病理模型基础上进行的抗肿瘤药物筛选的应用。重点介绍了鸡胚及禽类细胞系在病毒繁殖和疫苗生产、治疗性蛋白和单抗生产方面的应用研究进展。多种人源病毒、禽源病毒、支原体等可在鸡胚及禽类细胞上增殖，并用于疫苗生产。作者对常用的禽类纤维原细胞和多能干细胞的发展和特点进行了阐述，并总结了商业化的禽类细胞系来源以及部分易感病毒。鸡胚表达系统能够在目的蛋白特定位点产生人源化糖基，减少目的蛋白对人的过敏反应，且禽蛋廉价易得，可作为生产人用单克隆抗体和治疗性蛋白的合适供体。作者介绍了鸡胚及禽类细胞系在生物医药领域应用的最新进展，并对鸡胚作为动物模型在未来的应用进行了展望。     

籼稻C84和粳稻春江16B重组自交系遗传图谱构建及籽粒性状QTL定位与验证

【目的】本研究旨在挖掘水稻粒型新基因、探索其分子机理,解析籽粒发育调控遗传网络奠定基础,并为通过分子标记聚合有利基因开展超级稻分子设计育种提供理论依据。【方法】以植株和籽粒形态差异较大的晚粳稻品种春江16B(CJ16B）和广亲和中籼稻背景恢复系C84为亲本构建含有188个家系的重组自交系为作图群体,利用158对在双亲中存在多态性差异的分子标记,构建了遗传连锁图谱,总遗传距离为1428.40cM,平均标记间距为9.04cM。在构建遗传图谱的基础上,完成RIL188个株系籽粒的粒长、粒宽、粒厚、长宽比和千粒重等5个性状考查并进行QTL定位。【结果】在海南陵水和浙江杭州两地共检测到籽粒相关主效QTL30个,包括籽粒QTL新座位18个,解释遗传变异3.51%~17.25%。其中粒长、粒宽、粒厚和长宽比QTL位点分别为9个、5个、5个和6个,千粒重QTL位点5个。经基因座位比对,发现有5个QTL区间与已克隆的调控籽粒形态相关基因座位相近,我们通过对双亲目标基因的测序并根据差异位点设计dCAPs分子标记进行验证。【结论】该RIL群体及其遗传图谱可用于水稻重要农艺性状主效QTL基因的定位和克隆,新定位的18个粒型QTL可以为水稻籽粒发育调控网络提供补充和资料积累。     

Effect of location on starch content and tuber texture characteristics in potato breeding lines and cultivars

The texture of boiled potato tubers is one of the most important quality traits. The variation of tuber texture is usually examined in relationship with dry matter or starch content. The objective of the work was to examine variation and stability of texture and starch content in tubers grown in various environments. Both traits were evaluated for the set of potato breeding lines and 10 table potato cultivars. The lines were developed in the program of parental lines carried out in M?ochów Research Center, Poland. The environments were represented by three locations, which differed in cultivation system as well as climatic and soil conditions. The traits were influenced by the effects of genotype, location and their interactions. The effect of location on texture was not explained by the changes in starch content. The calculated stability parameters indicated that unstable expression of both traits was more pronounced and more frequent in breeding lines than in the cultivars. The short period of selection used in the development of the parental lines is not conducive to select potato genotypes with stable expression of quality traits. The starch content was at most moderately related with various characteristics of tuber texture.     

Revisiting rice breeding methods – evaluating the use of rapid generation advance (RGA) for routine rice breeding

Rice production needs to increase in the future in order to meet increasing demands. The development of new improved and higher yielding varieties more quickly will be needed to meet this demand. However, most rice breeding programmes in the world have not changed in several decades. In this article, we revisit the evidence in favour of using rapid generation advance (RGA) as a routine breeding method. We describe preliminary activities at the International Rice Research Institute (IRRI) to re-establish RGA on a large scale as the main breeding method for irrigated rice breeding. We also describe experiences from the early adoption at the Bangladesh Rice Research Institute. Evaluation of RGA breeding lines at IRRI for yield, flowering time and plant height indicated transgressive segregation for all traits. Some RGA lines were also higher yielding than the check varieties. The cost advantages of using RGA compared to the pedigree method were also empirically determined by performing an economic analysis. This indicated that RGA is several times more cost effective and advantages will be realized after 1 year even if facilities need to be built. Based on our experience, and previous independent research empirically testing the RGA method in rice, we recommend that this method should be implemented for routine rice breeding in order to improve breeding efficiency.     

Mapping of quantitative trait loci for floral scent compounds in cowpea (Vigna unguiculata L.)

Floral scent is a very important trait in plant evolution. Currently, little is known about the inheritance of floral scent in cowpea (Vigna unguiculata L.) or changes that might have occurred during its domestication. Therefore, we analysed scent volatiles and molecular markers in a population of 159 F₇ recombinant inbred lines derived from a cross of a domesticated blackeye cowpea cultivar, ‘524B’ and a wild accession ‘219‐01’. Using gas chromatography‐mass spectrometry (GC–MS) 23 volatile compounds were identified that fall into five general functional categories. Twenty‐two of the compounds displayed quantitative variation in the progeny, and a total of 63 QTLs influencing the amounts of these volatiles were mapped onto the cowpea genetic marker map. Although QTLs for volatile compounds putatively involved in cowpea flower scent were found on 9 of the 11 cowpea chromosomes, they were not evenly distributed with QTLs mainly clustered on LGs 1, LGs 2 and LG 4. Our results serve as a starting point for both more detailed analyses of complex scent biosynthetic pathways and the development of markers for marker‐assisted breeding of scented rose varieties.