不同粗蛋白质水平全混合颗粒日粮对马头山羊生长性能及血液生化指标的影响

本研究旨在探讨不同粗蛋白质水平全混合颗粒日粮对育肥期马头山羊的生长性能及血液生化指标的影响。选用3～4月龄马头山羊羯羔36只,随机分为4组,分别饲喂粗蛋白质水平为16.15%(对照组)、14.54%(试验1组)、12.92%(试验2组)和11.31%(试验3组)的全混合颗粒日粮,进行育肥试验。预试期18 d,正试期42 d。结果表明:试验3组马头山羊的平均日增重(0.17 kg/d)高于试验2组(P<0.05),对照组、试验1组和试验2组平均日增重差异不显著;试验3组马头山羊的血清尿素氮高于其他各组(P<0.05),谷草转氨酶/谷丙转氨酶低于其他各试验组(P<0.05),谷丙转氨酶低于对照组和试验1组(P<0.05)。在本试验条件下,马头山羊育肥期全混合颗粒日粮中适宜的粗蛋白质水平为11.31%,不同粗蛋白质水平全混合颗粒日粮对马头山羊血液生化指标均没有不良影响。     

山羊卵泡发育相关基因的筛选及分析

【背景】山羊第一卵泡波中的优势卵泡（dominant follicles, DF）和从属卵泡（subordinate follicles, SF）是整个卵泡发育过程中最为关键的两个阶段。随着卵泡的进一步发育,最终DF可能发育成为成熟卵泡,直到排卵;SF将走向闭锁,其中颗粒细胞的凋亡是导致卵泡发生闭锁的关键因素。然而目前对促进卵泡的优势化或导致其闭锁的分子机理尚不清楚。【目的】通过对山羊第一卵泡波中DF和SF颗粒细胞进行高通量测序,旨在筛选影响卵泡发育的关键基因,为深入探究卵泡发育的调控机制提供理论依据。【方法】选取10只1岁龄健康的贵州白山羊分别注射前列腺素F_2α,使其同期发情,此后每天用B超检测并记录卵泡的生长情况,发情3 d后,统一屠宰并采集第一卵泡波中DF (直径4.5—6 mm)与SF (直径3 —4.5 mm),分别分离其中的颗粒细胞,提取总RNA、构建文库后通过Illumina Hiseq 2500平台进行测序。利用FastQC对测序产出raw reads进行质量评估并经过过滤后,获得品质较高的clean reads;使用Trinity对得到的clean reads进行重新组装,从而获得unigenes;使用CLC Genomics Workbench将unigenes与山羊RefSeq数据库进行比对获得mRNA;使用DESeq2 软件对获得的mRNA进行差异表达分析;分别采用goseq和kobas软件对得到的差异表达基因进行GO分析及KEGG信号通路分析;最终通过qRT-PCR对筛选出的可能影响卵泡发育的关键基因进行验证。【结果】分别对测序得到的raw reads进行过滤后,在DF颗粒细胞中获得43 217 934条clean reads,占raw reads的比例为95.19%;SF颗粒细胞中获得40 766 348条clean reads,占raw reads的比例为95.35%。将得到的unigenes与山羊的RefSeq 数据库进行比对后,共得到33 896条带有注释的转录本,再通过设定FPKM>1, q value<0.05,共在两种卵泡颗粒细胞中获得13 644个基因。设定参数：FPKM≥1,SF-FPKM/DF-FPKM>1,P<0.05,获得695个差异表达mRNA,其中233个在SF颗粒细胞中表达显著上调,462个表达显著下调;对所获得695个差异表达mRNA进行GO功能富集分析,共分为三大类42组：其中生物学过程占47.6%,细胞组分占47.6%,分子功能占4.8%;KEGG信号通路分析,发现20条通路,其中与核糖体通路相关的基因富集最为显著。通过在Genecard中进行功能分析后,筛选6个可能与山羊卵泡发育密切相关的基因,其中PRLR、PTX3、RGN在SF颗粒细胞中表现为上调;DKK3、ALDH1A2、RARRES1则表现为下调。qRT-PCR显示PRLR、RGN、DKK3、ALDH1A2、RARRES1的表达趋势与高通量测序结果一致,且RGN在从属卵泡颗粒细胞中的表达量极显著地高于优势卵泡（P<0.01）;DKK3、ALDH1A2、RARRES1在优势卵泡颗粒细胞中的表达量极显著地高于从属卵泡（P<0.01）。【结论】DKK3、ALDH1A2、RARRES1和RGN在优势卵泡和从属卵泡中表达量存在极显著差异,推测在山羊卵泡发育过程中可能促进卵泡的优势化或导致闭锁,对深入探究卵泡发育的调控机制具有重要意义。     

影响哺乳期羔羊生长的母羊因素分析

为探索母羊因素对哺乳期云上黑山羊羔羊生长发育的影响,根据母羊体重、胎次分别选取云上黑山羊初生羔羊90只和120只,公、母各半,从出生开始直至90日龄断奶,每10天进行1次体重测定,进行生长发育分析。结果表明:(1)母羊产后体重对羔羊初生重、哺乳期体重具有显著影响(P<0.05)。母羔中,38~45 kg母羊组和48~62 kg母羊组的羔羊初生重、平均日增重均显著高于28~35 kg母羊组(P<0.05)。公羔中,38~45 kg母羊组的羔羊初生重显著高于其他两组羔羊(P<0.05),48~62 kg母羊组其羔羊平均日增重显著高于其他两组羔羊(P<0.05)。(2)母羊胎次对母羔初生重没有显著影响,但对母羔哺乳期体重均有显著影响(P<0.05),母羔中,3胎、4胎母羊组的羔羊平均日增重均显著高于1胎和2胎母羊组;母羊胎次对公羔的影响不显著。说明母羊产后体重显著影响羔羊胎儿期和哺乳期的生长发育,合适的母羊体重可以为羔羊提供充足的营养;母羊胎次仅对哺乳期母羔具有显著影响,母羊的母性行为随胎次的增加而完善。     

Three SNPs within exons of INHA and ACVR2B genes are significantly associated with litter size in Dazu black goats

The aim of this study was to analyse the association between single-nucleotide polymorphisms within INHA and ACVR2B and litter size in Dazu black goats. In total, twenty-two SNPs were genotyped in 190 individuals by SNaPshot and resequencing. The results showed that three SNPs (SNP_1, SNP_12 and SNP_13 in this study) were detected to have significant additive genetic effect on the recorded goat litter size (p < .05). The SNP_1 (NC_030809.1), a non-synonymous substitution of G for T at chr2-g. 28314990 in the exon 2 of INHA gene (NM_001285606.1), resulted in homozygote 2 (HOM2) contributed 0.25 and heterozygote (HET) contributed 0.12 larger litter than homozygote 1 (HOM1). Meanwhile, SNP_12 (Chr22-g. 11721225 A > T) and SNP_13 (Chr22-g. 11721227 A > C) (NC_030829.1) simultaneously mutated at the first and third position of a triplet AAA (lysine, K) in the exon 4 of ACVR2B gene (XM_018066623.1) had estimated genetic effects of HOM1 (0.00) and HOM2 (0.03) larger than HET (−0.12). In conclusion, one SNPs (chr2-g. 28314990 T > G) within the exon 2 of INHA and two SNPs (Chr22-g. 11721225 A > T and Chr22-g. 11721227 A > C) i n the exon 4 of ACVR2B gene were highly recommended as candidate markers of litter size in Dazu black goats. A large-scale association study to assess the impact of these variants on litter size is still necessary.     

CRISPR/Cas9介导的MSTN/FGF5基因编辑陕北白绒山羊粪便菌群分析

为了从绒山羊粪便微生物群落变化的角度对MSTN/FGF5基因编辑陕北白羊绒山的自身健康和环境安全性进行研究,利用6种不同培养基分别对MSTN/FGF5基因编辑和野生型陕北白绒山羊粪便中的微生物进行培养、计数,并做菌群结构的显著性检验分析。结果表明:FGF5/MSTN基因编辑和野生型陕北白绒山羊F0代和F1代公羊和母羊新鲜粪样经LB琼脂、伊红美蓝琼脂、TPY琼脂、胆硫乳琼脂、肠球菌琼脂和甘露醇盐琼脂培养后微生物计数分别为,F0代:公羊6.35±0.68,5.89±0.25;5.32±0.10,5.27±0.34;6.64±0.57,6.71±0.35;5.03±0.53,5.32±0.14;4.12±0.13,4.15±0.21;5.34±0.18,5.25±0.25;母羊6.62±0.45,6.64±0.31;4.80±0.51,4.75±0.45;7.20±0.30,7.15±0.55;4.30±0.52,4.42±0.62;5.83±0.51,5.73±0.86;6.24±0.28,6.24±0.21。F1代:公羊6.92±0.12,7.08±0.04;4.02±0.64,3.99±0.51;6.32±0.15,6.25±0.30;5.21±0.28,5.17±0.20;3.66±0.50,3.88±0.67;4.06±0.50,3.97±0.46;母羊7.12±0.24,6.96±0.19;4.15±0.19,4.25±0.24;6.45±0.30,6.56±0.45;4.97±0.42,4.87±0.38;4.04±0.96,3.96±0.57;4.10±0.28,3.85±0.37。F0和F1代MSTN/FGF5基因编辑陕北白绒山羊与野生型陕北白绒山羊粪便中菌群结构之间不存在显著性差异(P0.05)。本研究为FGF5/MSTN基因编辑陕北白绒山羊的安全性评价研究提供了试验数据和研究基础。     

Growth performance of Black Bengal,Saanen, and their crossbred F1 as affected by sex,litter size,and season of kidding

The objective of the present study was to determine the factors that influenced growth performance of the goat kids of Black Bengal (BB), Saanen (SA), and their crossbred F1 (male Bengal × female Saanen [BBSA] and male Saanen × female Black Bengal [SABB]). Data for 674 kids were analyzed from 316 litters and 134 does. All kids were weekly measured on their characteristics (body weight, length, height at the withers, and chest girth) from birth to 11 weeks old. The kid’s breed and sex, litter size, and season of kidding influenced birth weight and other characteristics through the experiment. The SA and BBSA kids showed similar performance, which were higher than BB and SABB kids. Male kids had higher performance than female kids, and kids from a single litter showed the highest performance. Kids born during rainy season showed lower performance than those born in hot and cool seasons. In conclusion, the crossbred BBSA is superior to SABB or BB to raise in tropical climate Moreover, sex, litter size, and kidding season also affected growth performance during the preweaning period up to 11 weeks old.     

全基因组选择信号揭示绒山羊绒毛性状相关的候选基因

旨在对辽宁绒山羊和内蒙古绒山羊的基因组选择信号进行筛选。本研究利用Illumina 50K的山羊芯片，对内蒙古绒山羊、辽宁绒山羊和黄淮山羊进行基因型检测，质控后获得50 010个共同SNPs位点。通过群体分化系数Fst和XP-EHH，以黄淮山羊为参考群体分别对内蒙古绒山羊和辽宁绒山羊进行选择信号检测，Fst和XP-EHH值的top 5%作为阈值。结果，利用Fst在绒山羊基因组中筛选到501个候选基因，利用XP-EHH在绒山羊基因组中筛选到145个候选基因。其中有12个SNPs在绒山羊基因组中受到较强选择。通过基因注释筛选到21个候选基因，包括EXOC4、ASIC2、PCDH9、RHBDD1、IRS1和PDE10A等。这些基因主要富集在PI3K-Akt信号通路、蛋白质消化吸收和松弛素信号通路等。研究结果发现，绒山羊在驯化过程中其基因组很多与毛囊相关的基因受到了强烈的选择。这些发现也有助于更好地了解绒山羊的选择进展，为中国绒山羊品种的种质资源保护和利用提供重要参考。     

miR-106b-5p靶向KLF4调控山羊肌内前体脂肪细胞分化

旨在明确miR-106b-5p对山羊肌内前体脂肪细胞分化的影响，并确定这种作用是通过靶向KLF4来实现的。本研究利用实时荧光定量PCR （quantitative real-time PCR，qRT-PCR）技术检测miR-106b-5p在山羊肌内前体脂肪细胞分化过程中的表达模式，通过脂质体转染技术将miR-106b-5p mimic和miR-106b-5p inhibitor转入体外培养的山羊肌内前体脂肪细胞，油红O染色法从形态学验证miR-106b-5p对脂肪细胞中脂滴积聚的影响，qRT-PCR检测预测的靶标基因KLF4和脂肪分化标志基因的表达情况，利用双荧光素酶报告系统鉴定miR-106b-5p与KLF4的靶标关系。qRT-PCR结果显示，miR-106b-5p在山羊肌内前体脂肪细胞诱导分化第3天时表达量最高。在山羊肌内脂肪细胞中干扰miR-106b-5p后油红O染色显示脂滴聚积减少，过表达miR-106b-5p后脂滴聚积增加。在山羊肌内前体脂肪细胞中转染miR-106b-5p inhibitor后PPARγ表达量显著降低（P<0.05），而KLF4表达量极显著升高（P<0.01）；转染miR-106b-5p mimic后LPL和PPARγ表达量极显著升高（P<0.01）。荧光素酶活性试验结果显示，过表达miR-106b-5p可显著抑制KLF4荧光活性。miR-106b-5p通过靶向并负调节KLF4的表达促进山羊肌内脂肪细胞分化。     

奶山羊CIDEa基因的克隆、序列分析与组织表达

为获得奶山羊CIDEa基因序列并检测其在乳腺组织中的表达,采用RT-PCR技术从奶山羊乳腺组织扩增CIDEa基因序列,利用生物信息学软件对其进行预测分析,并采用荧光定量PCR检测CIDEa在干奶期和不同泌乳时期乳腺组织中的表达。结果表明:通过克隆测序得到奶山羊CIDEa基因CDS区660 bp,编码219个氨基酸,与GenBank公布的绵羊、牛、人和猪的核苷酸序列同源性分别为99%、96%、85%、85%。奶山羊CIDEa蛋白属于碱性、不稳定亲水蛋白,不存在跨膜结构和信号肽;蛋白主要定位在细胞质、线粒体和细胞核。CIDEa蛋白结构主要由α螺旋、β折叠和不规则卷曲组成。奶山羊CIDEa在泌乳前期、盛期和中期乳腺组织中表达量均显著高于干奶期(P<0.05)。说明CIDEa可能参与奶山羊乳腺的泌乳过程,为进一步研究其在奶山羊乳腺组织中的功能及对乳品质的调控作用奠定基础。     

Seasonal changes in feed intake,diet digestibility and diet composition by lactating and non‐lactating goats browsing in a semi‐arid rangeland of Argentina

We determined the seasonal nutrient and secondary compound intake, in vivo diet digestibility (DD) and diet species composition of goats in different physiological states in a desert rangeland of Argentina. During the wet and the dry seasons, 24 mature female Creole goats (six non‐lactating, non‐pregnant and six lactating in each season) were used in a 2 × 2 factorial design. Diet botanical composition, DD and dry‐matter intake (DMI) were estimated by the combined use of visual observation, microhistological analyses of faecal samples and n‐alkane technique. Browse species dominated the goats’ diets (>80%) in both seasons and physiological states, with a twofold increase in the proportion of forbs during the wet season (p < 0.10). Lactating goats showed greater DMI than non‐lactating animals, and they also displayed greater intakes of some tanniferous (Mimosa ephedroides) and high‐protein (Atriplex lampa) shrubs (p < 0.10). Lactating and non‐lactating goats selected diets with adequate crude protein (CP) and fibre content but insufficient energy, although lactating goats tended to increase energy and tannin content in their diets (p < 0.20). Physiological state did not influence DD, but digestibility was greater (p < 0.10) in the wet season, attributed to the greater protein content and lower tannin content of the diet. These results have important implications for managerial interventions on traditional goat production systems in the study area aiming at enhancing goat nutrition and welfare, as well as the sustainability of rangeland resources in the region.