Fusarium wilt of chickpea: physiological specialization, genetics of resistance and resistance gene tagging

Chickpea wilt caused by Fusarium oxysporum f. sp. ciceris is one of the major yield limiting factors in chickpea. The disease causes 10–90% yield losses annually in chickpea. Eight physiological races of the pathogen (0, 1A, 1B/C, 2, 3, 4, 5 and 6) are reported so far whereas additional races are suspected from India. The distribution pattern of these races in different parts of the world indicates regional specificity for their occurrence leading to the perception that F. oxysporum f. sp. ciceris evolved independently in different regions. Pathogen isolates also exhibit differences in disease symptoms. Races 0 and 1B/C cause yellowing syndrome whereas 1A, 2, 3, 4, 5 and 6 lead to wilting syndrome. Genetics of resistance to two races (1B/C and 6) is yet to be determined, however, for other races resistance is governed either by monogenes or oligogenes. The individual genes of oligogenic resistance mechanism delay onset of disease symptoms, a phenomenon called as late wilting. Slow wilting, i.e., slow development of disease after onset of disease symptoms also occurs in reaction to pathogen; however, its genetics are not known. Mapping of wilt resistance genes in chickpea is difficult because of minimal polymorphism; however, it has been facilitated to great extent by the development of sequence tagged microsatellite site (STMS) markers that have revealed significant interspecific and intraspecific polymorphism. Markers linked to six genes governing resistance to six races (0, 1A, 2, 3, 4 and 5) of the pathogen have been identified and their position on chickpea linkage maps elucidated. These genes lie in two separate clusters on two different chickpea linkage groups. While the gene for resistance to race 0 is situated on LG 5 of Winter et al. (Theoretical and Applied Genetics 101:1155–1163, 2000) those governing resistance to races 1A, 2, 3, 4 and 5 spanned a region of 8.2 cM on LG 2. The cluster of five resistance genes was further subdivided into two sub clusters of 2.8 cM and 2.0 cM, respectively. Map-based cloning can be used to isolate the six genes mapped so far; however, the region containing these genes needs additional markers to facilitate their isolation. Cloning of wilt resistance genes is desirable to study their evolution, mechanisms of resistance and their exploitation in wilt resistance breeding and wilt management.     

RAPD and ISSR fingerprinting in cultivated chickpea (<Emphasis Type="Italic">Cicer arietinum</Emphasis> L.) and its wild progenitor <Emphasis Type="Italic">Cicer reticulatum</Emphasis> Ladizinsky

Detection of genetic relationships between 19 chickpea cultivars and five accessions of its wild progenitor Cicer reticulatum Ladizinsky were investigated by using RAPD and ISSR markers. On an average, six bands per primer were observed in RAPD analysis and 11 bands per primer in ISSR analysis. In RAPD, the wild accessions shared 77.8% polymorphic bands with chickpea cultivars, whereas they shared 79.6% polymorphic bands in ISSR analysis. In RAPD analysis 51.7% and 50.5% polymorphic bands were observed among wild accessions and chickpea cultivars, respectively. Similarly, 65.63% and 56.25% polymorphic bands were found in ISSR analysis. The dendrogram developed by pooling the data of RAPD and ISSR analysis revealed that the wild accessions and the ICCV lines showed similar pattern with the dendrogram of RAPD analysis. The ISSR analysis clearly indicated that even with six polymorphic primers, reliable estimation of genetic diversity could be obtained, while nearly 30 primers are required for RAPD. Moreover, RAPD can cause genotyping errors due to competition in the amplification of all RAPD fragments. The markers generated by ISSR and RAPD assays can provide practical information for the management of genetic resources. For the selection of good parental material in breeding programs the genetic data produced through ISSR can be used to correlate with the relationship measures based on pedigree data and morphological traits to minimize the individual inaccuracies in chickpea.     

Differential responses of chickpea (Cicer arietinum L.) — Rhizobium combinations to saline soil conditions

Summary Chickpea cultivars (Cicer arietinum L.) and their symbiosis with specific strains of Rhizobium spp. were examined under salt stress. The growth of rhizobia declined with NaCl concentrations increasing from 0.01 to 2% (w : v). Two Rhizobium spp. strains (F-75 and KG 31) tolerated 1.5% NaCl. Of the 10 chickpea cultivars examined, only three (Pusa 312, Pusa 212, and Pusa 240) germinated at 1.5% NaCl. The chickpea — Rhizobium spp. symbiosis was examined in the field, with soil varying in salinity from electrical conductivity (EC) 4.5 to EC 5.2 dSm^-1, to identify combinations giving satisfactory yields. Significant interactions between strains and cultivars caused differential yields of nodules, dry matter, and grain. Four chickpea — Rhizobium spp. combinations, Pusa 240 and F-75 (660 kg ha^-1), Pusa 240 and IC 76 (440 kg ha^-1), Pusa 240 and KG 31 (390 kg ha^-1), and Pusa 312 and KG 31 (380 kg ha^-1), produced significantly higher grain yields in saline soil.     

Evaluation of perennial wild <Emphasis Type="Italic">Cicer</Emphasis> species for drought resistance

About 90% of chickpea (Cicer arietinum L.) in the world is grown under rainfed conditions where drought is one of the major constraints limiting its productivity. Unlike the cultivated chickpea, wild Cicer species possesses sources of resistance to multiple stresses; we therefore evaluated perennial wild Cicer species for resistance to drought. C. anatolicum, C. microphyllum, C. montbretii, C. oxydon and C. songaricum were compared with special checks; C. echinospermum, C. pinnatifidum and C. reticulatum and five cultivated chickpeas. After the cultivated chickpeas were killed, accessions were evaluated using a 1–5 scale, where 1 = highly drought resistant (no visible drought effect and full recovery after three successive wiltings) and 5 = highly drought susceptible (leaves and branches dried out, no recovery at all). All accessions of perennial wild Cicer species were significantly superior to those annual wild species and the cultivated chickpeas including the best drought tolerant chickpea, ICC 4958 under drought conditions. Perennial wild Cicer species did not only recover after wilting and drying out above ground level, they also tolerated high temperatures up to 41.8°C. But, they do not cross with the cultivated chickpeas. C. anatolicum should be taken account in long term breeding programs because it has closer affinities to the first crossability group than the others.     

Short internode,double podding and early flowering effects on maturity and other agronomic characters in chickpea

Chickpea is an indeterminate species, which continues to flower and set new pods over a long period under wet and cool growing conditions, resulting in excessive canopy development and delayed maturity. We hypothesized that the chickpea's long season requirement could be reduced through introgression of short internode, double podding and early flowering. Four populations E100Ym/CDC Anna, 272-2/CDC Anna, 298T-9/CDC Anna, and 298T-9/CDC Frontier were developed to test this hypothesis with the first parents of each cross being the donor of the short internode, double podding and early flowering traits, respectively. Also, the donor parents E100Ym, 272-2 and 298T-9 were intercrossed. Segregating populations of F₂ to F_3:6 generations were then evaluated under greenhouse and field conditions. When expressed well, double podding significantly reduced time to maturity as compared to the single podding counterparts. The best double podding lines were about 1 week earlier maturing than the early parent and standard checks. Days to flowering (DF) was positively associated with days to maturity (DM) (r = 0.44, P < 0.001), and partial path analysis revealed that DF contributed to DM mainly via days to first pod maturity (DFPM). In the two early flowering populations 298T-9/CDC Anna and 298T-9/CDC Frontier, DF determined about 32% of the variation in DFPM. Conversely, the short internode trait had an undesirable effect, in that all the short internode segregants were too late to mature. In conclusion, the alleles for double podding and early flowering may be used to improve early maturity in chickpea and subsequently minimize the risks associated with the production of this crop in environments where the growing conditions allow excessive crop canopy development, as in the Canadian prairies.     

Nutritional quality of chickpea (Cicer arietinum L.): current status and future research needs

The nutritional composition and the affects of processing and storage and anti-nutrients on nutritional value of chickpeas are reviewed. Future research needs are discussed.Submitted as J.A. No. 431 by the International Crops Research Institute for the Semi-Arid Tropics (ICRASAT).     

Evaluation of annual wild <Emphasis Type="Italic">Cicer</Emphasis> species for drought and heat resistance under field conditions

About 90% of chickpea (Cicer arietinum L.) in the world is grown under rainfed conditions where it is subjected to drought and heat stress. Unlike the cultivated chickpea, annual wild Cicer species possess sources of resistance to multiple stress; annual wild Cicer species were therefore evaluated for resistance to drought and heat stress. Eight annual wild Cicer species (Cicer bijugum, C. chorassanicum, C. cuneatum, C. echinospermum, C. judaicum, C. pinnatifidum, C. reticulatum, and C. yamashitae) were compared with special checks, the cvs ICC 4958 and FLIP 87-59C (drought resistant) and ICCV 96029 (very early double-podded). ILC 3279 and 8617 as drought susceptible checks were sown after every 10 test lines. Yield losses due to drought and heat stress in some accessions and susceptible checks (ILC 3279 and ILC 8617) reached 100%. Accessions were evaluated for drought and heat resistance on a 1 (free from drought and heat damage)−9 (100% plant killed from drought and heat) visual scale. Four accessions of C. reticulatum and one accession of C. pinnatifidum were found to be as resistant to drought and heat stress (up to 41.8°C) as the best checks. C. reticulatum should be taken account in short term breeding programs since it can be crossed with the cultivated chickpea.     

Integrated disease management of ascochyta blight in pulse crops

Ascochyta blight causes significant yield loss in pulse crops worldwide. Integrated disease management is essential to take advantage of cultivars with partial resistance to this disease. The most effective practices, established by decades of research, use a combination of disease-free seed, destruction or avoidance of inoculum sources, manipulation of sowing dates, seed and foliar fungicides, and cultivars with improved resistance. An understanding of the pathosystems and the inter-relationship between host, pathogen and the environment is essential to be able to make correct decisions for disease control without compromising the agronomic or economic ideal. For individual pathosystems, some components of the integrated management principles may need to be given greater consideration than others. For instance, destruction of infested residue may be incompatible with no or minimum tillage practices, or rotation intervals may need to be extended in environments that slow the speed of residue decomposition. For ascochyta-susceptible chickpeas the use of disease-free seed, or seed treatments, is crucial as seed-borne infection is highly effective as primary inoculum and epidemics develop rapidly from foci in favourable conditions. Implemented fungicide strategies differ according to cultivar resistance and the control efficacy of fungicides, and the effectiveness of genetic resistance varies according to seasonal conditions. Studies are being undertaken to develop advanced decision support tools to assist growers in making more informed decisions regarding fungicide and agronomic practices for disease control.     

超高压对鹰嘴豆分离蛋白起泡性能的影响

研究超高压(100~600 MPa)对鹰嘴豆分离蛋白起泡性能的影响。结果表明:在磷酸盐和Tris-HCl缓冲体系中,超高压处理均能显著提高鹰嘴豆分离蛋白的起泡能力。在磷酸盐缓冲体系和Tris-HCl缓冲体系pH范围内(pH值为6.0~8.0),升高处理压力(大于300MPa)和延长保压时间(大于5 min)都会使鹰嘴豆分离蛋白起泡能力显著提高。在起泡能力提高的同时,磷酸盐缓冲体系中CPI泡沫稳定性下降,而在Tris-HCl缓冲体系中泡沫稳定性提高。     

Optimization of sample ph and temperature for phosphorus‐31 nuclear magnetic resonance spectroscopy of poultry manure extracts

Abstract

Organic phosphorus (P) compounds can be characterized using nuclear magnetic resonance (NMR) spectroscopy provided conditions are suitable for detecting the NMR signal. The objective of the research was to optimize pH and temperature conditions for turkey manure extracts prior to analysis of organic P compounds using NMR. Samples of turkey manure were extracted with 0.25 MNaOH + 0.05 MEDTA. The extracts were lyophilized and resolubilized in distilled H₂O before analysis on a General Electric GN500 NMR spectrometer. Initial ³¹P NMR experiments were run to determine the optimal instrumental parameters for ³¹P studies. Samples were titrated to seventeen pH values ranging from 4.0 to 13.2. Samples adjusted to pH 10.0 had the greatest spectral resolution. A seven‐by‐three factorial experiment was used to investigate the effect of seven temperatures (5,10,20,30,40,50, and 60°C) on three separate samples at pH 6.5,9.0, or 10.0. Spectra resolution was greatest at pH 10.0 and 20°C.