基于Random Forest的水稻细菌性条斑病识别方法研究

为了快速、准确、有效地识别发病早期的细菌性条斑病,提出基于随机森林(Random forest,RF)算法的水稻细菌性条斑病识别方法,利用光谱成像技术获取该病害的高光谱数据,通过多元散射校正减少和消除噪声及基线漂移对光谱数据的不利影响。利用随机森林特征重要性指标,选取逻辑回归(LR)、朴素贝叶斯(NB)、决策树(DT)、支持向量分类机(SVC)、k最近邻(KNN)和梯度提升决策树(Gradient boosting decision tree,GBDT)算法进行对比试验。同时筛选出12个位于450~664 nm范围内对识别模型有重要影响的光谱波段,并与全波段进行分类结果比较。试验结果表明:RF算法的分类准确率为95.24%,与试验选取的其他算法相比,效果最优,比NB准确率提高了20.97个百分点;与全波段分类结果相比,利用RF算法基于12个波长的识别,波长数减少了98.05%,识别精确率为94.66%,召回率为99.55%,F1值为97.04%,准确率为94.32%。虽然精确率减少了2.97个百分点、准确率减少了0.85个百分点,但召回率增加了4.4个百分点、F1值增加了0.67个百分点,模型精度满足要求。     

糖分含量对番茄叶片Pst DC3000抗性的影响及其机理

研究糖代谢对番茄叶片细菌性叶斑病(Pst DC3000)抗性的影响及其可能的生理生化机制,为抗病番茄新品种的选育提供参考。以糖代谢特征不同的早上取样叶片(早8:00取样)和晚上取样叶片(晚6:00取样)为材料,测定离体接种后不同时期(0、24、48 h)上述两种叶片在Pst DC3000抗性、细菌密度、可溶性糖和淀粉含量、转化酶活性、水杨酸(SA)和茉莉酸(JA)含量、细胞死亡和H₂O₂积累方面的差异。结果表明,和早上取样叶片相比,晚上取样叶片对Pst DC3000具有更高的抗性,表现为较轻的病斑和细胞死亡现象,同时叶片内的细菌密度也极显著(P≤0.01)降低。此外,和早上取样叶片相比,晚上取样叶片在接种后具有更高的淀粉含量(0~48 h)、葡萄糖含量(0、24 h)和果糖含量(24、48 h),但在蔗糖含量上无显著差异。对3种转化酶活性的测定表明,晚上取样叶片的细胞壁转化酶(CWIN)活性在接种后0、48 h显著(P≤0.05)低于早上取样叶片,而细胞质转化酶(CIN)活性在接种后24、48 h则显著(P≤0.05)高于早上取样叶片,液泡转化酶(VIN)活性在两种叶片之间无显著差异。最后,和早上取样叶片相比,晚上取样叶片具有相对较少的H₂O₂积累(48 h)和显著(P≤0.05)较高的游离态SA和JA含量(48 h)。总之,和早上取样叶片相比,晚上取样叶片具有较高淀粉、己糖含量和CIN活性,以及较低的CWIN活性,这可能是晚上取样叶片具有较高SA和JA含量,以及较少H₂O₂积累和细胞死亡的重要原因,从而使得晚上取样叶片对Pst DC3000的抗性提高。     

番茄青枯病抗性相关根际微生物的研究进展

由茄科雷尔氏菌（Ralstonia solanacearum）侵染引起的植物细菌性青枯病（Bacterial wilt）素有“植物癌症”之称,是一种毁灭性土传细菌病害。目前,青枯病已成为制约我国番茄生产的主要病害之一。抗青枯病番茄品种表现出与劣质农艺性状连锁遗传的问题一直没有得到解决,而且番茄青枯病抗性主要为数量遗传,不利于优良抗病品种的选育。根际微生物参与调控植物免疫系统,提高寄主植物青枯病抗性,反之,寄主植物的健康状况也能够影响根际微生物群落组成,根际微生物在番茄青枯病防治中具有重要作用。对抗青枯病番茄根际微生物群落特征及微生物群落形成的影响因素进行总结,讨论了根际微生物参与调控番茄青枯病抗性遗传的作用机制,并对利用有益根际微生物调控番茄青枯病研究方向的热点进行展望,为番茄青枯病诱导抗性机制的解析、遗传育种以及番茄青枯病的防治与品种的合理布局提供有效参考。     

Identification of QTLs Associated with Resistance to Pseudomonas syringae pv.Glycinea in Soybean (Glycine max (L.) Merr)

Soybean bacterial spot disease caused by Pseudomonas syringae pv.Glycinea which is a bacterial disease seriously affects soybean yield.Ten soybean germplasms and recombinant inbred lines (RILs) population were used to identify the resistant trait after inoculated with P.sg (P.sgneau001) in this study.High-density genetic mapping was obtained by specific length amplified fragment sequencing (SLAF-seq) of 149 RILs population which was derived from the crossing between Charleston and Dongnong594.The results indicated that 10 germplasm resources had four resistant germplasms included highly resistant cultivar Charleston,four susceptible varieties included Dongnong594 and two moderately resistant cultivars.Five quantitative trait locus (QTLs) were detected in RILs population by the composite interval mapping (CIM) method,and located on Linkage Group (LG) D1b (chromosome two),LG C2 (chromosome six) and LG H (chromosome 12),respectively.LOD scores ranged from 2.68 to 4.95 and the phenotypic variation percentage was from 6% to 11%.Six candidate genes were detected,according to the result of gene annotation information.Four of them had relationship with protein kinase activity,protein phosphorylation and leucine rich repeat (LRR) transmembrane protein,which had high expression after inoculated with P.sg by qRT-PCR.     

Short-term baths with essential oils of Lippia sidoides,Ocimum gratissimum and Zingiber officinale influence blood parameters and survival of tambaqui (Colossoma macropomum) after infection with Aeromonas hydrophila

This study evaluated the effect of short-term baths with the essential oils (EOs) of Lippia sidoides, Ocimum gratissimum and Zingiber officinale on the survival, haematological, biochemical and histopathological parameters of native fish tambaqui (Colossoma macropomum), challenged with Aeromonas hydrophila. After challenge, the fish infected with A. hydrophila received therapeutic baths of 60 min, for five consecutive days. Treatments were as follows: challenged and not treated; challenged and treated with 10 mg L^?1 of gentamicin; challenged and treated with EO of L. sidoides (2.5 and 5.0 mg L^?1); challenged and treated with EO of O. gratissimum (5.0 and 10.0 mg L^?1); challenged and treated with Z. officinale EO (5.0 and 10.0 mg L^?1). The highest survival rates were 89.5% (fish treated with 5.0 mg L^?1 of O. gratissimum EO) and 75.0% (fish treated with 5.0 mg L^?1 of L. sidoides EO). Reductions in the haematocrit percentage, haemoglobin and erythrocyte number were observed in fish treated with L. sidoides and Z. officinale EOs compared with control fish. Mild to moderate damage to the liver tissue of fish after challenge and EO treatments were observed. It is suggested that baths containing O. gratissimum and L. sidoides EOs consist in a viable treatment to increase survival rates of C. macropomum infected with A. hydrophila.     

粘帚霉对几种水生生物有害菌的抑制作用测定

采用对峙培养法测定了粘帚霉16株菌株对嗜水气单胞菌、耶耳森菌、鳗弧菌、褐藻酸降解菌-MA10和褐藻酸降解菌-MB16的作用。试验结果表明,粘帚霉中NCH-3-1、YJS-3-2、GJ-1-1、SS-1-1、SHW-2-1、SHW-1-1、BD-2-2 7株菌株对供试的5种有害菌表现出较强的抑制作用。     

Blood chemistry and acid-base balance in rainbow trout Oncorhynchus mykiss with experimentally-induced acute bacterial gill disease

Rainbow trout were experimentally infected with the causative agent of bacterial gill disease (BGD) (Flavobacterium branchiophilum) via bath challenge. All fish were cannulated with dorsal aortic catheters, had nasogastric tubes sutured in place for feeding, and were maintained individually, in plexiglass boxes with a flow-through water system. Fish were either fed, or unfed during the trial. Acute changes in blood gas, serum biochemistry and clinical parameters were monitored. By 24h post-challenge, BGD-infected trout that had been fed had significant hypoxemia, hypercapnia, increased blood ammonia, hypoosmolality, hyponatremia, hypochloremia, and increased cough and respiratory rates when compared to control levels. Unfed BGD-infected trout had similar, but less severe blood gas and clinical changes, and no electrolyte disturbances. The BGD-induced hypoxemia is likely exacerbated by increased oxygen demands brought on by feeding. It is not known what association feeding has with the development of low serum ion levels in BGD-infected trout. This is the first study to report the use of fed fish, as opposed to unfed or starved trout, in obtaining blood chemistry values from indisturbed and cannulated animals.     

Intracranial botryomycosis in a mature horse

This case report describes an unusual diagnosis of central nervous system botryomycosis in a horse. A 16‐year‐old Welsh Section D gelding was evaluated for acute onset of hypermetric ataxia, leaning to the left and head tilt to the right. Based on the neurological signs, a cerebellar lesion with accompanying vestibular disease was suspected and supportive therapy consisting of antimicrobial and glucocorticosteroid drugs and hypertonic saline was instituted. This resulted in marked clinical improvement over a 48 h period. Computed tomography performed in the standing, sedated horse following initial stabilisation identified extensive sclerosis and lysis of the right temporal and occipital bones, consistent with an infectious or neoplastic process. Based on the grave prognosis for survival despite the clinical improvement, euthanasia was undertaken. Post mortem magnetic resonance imaging identified a mass lesion impinging on the right cerebellar hemisphere, sclerosis of the temporal and occipital bones lateral and ventral to the mass, as well as destruction of the temporal bone between the inner ear and the cerebellum. These changes corresponded to the presence of a mass within the right dorsal temporal bone, extending into the right lateral temporal bone. The mass extended to compress and adhere to the right lateral hemisphere of the cerebellum. A histopathological diagnosis of botryomycosis was made, affecting the temporal and occipital bones and compressing the cerebellum.     

山东规模化养殖场毛皮动物多重感染病原学分析

2012—2013年间,山东10个地市多家毛皮动物养殖场养殖的毛皮动物（狐狸、貉子、水貂）出现腹泻,皮肤湿疹,神经症状,空怀、流产、出血性肺炎等症状和病变类似的疫情,为探明其病因,本研究对发病规模化毛皮动物养殖场发病情况进行调查,并对送检的病料进行病原学检查,结果发现,犬瘟热病毒、细小病毒、阿留申病毒感染率分别为54.21%、47.30%、31.35%;肺炎克雷伯菌、奇异变形杆菌、肺炎双球菌、大肠杆菌、沙门杆菌、绿脓杆菌、加德纳菌的感染率分别为37.58%、25.05%、21.81%、14.04%、12.53%、10.37%、8.21%;犬瘟热病毒、细小病毒、阿留申病毒、肺炎克雷伯菌、奇异变形杆菌、肺炎双球菌6种病原的单独感染、二重感染、三重感染、四重感染分别为22.03%、39.52%、36.07%、2.38%,未见五重以上的感染。结果表明,近两年造成山东规模化场毛皮动物发病主要原因是由犬瘟热病毒、细小病毒、阿留申病毒与肺炎克雷伯菌、奇异变形杆菌、肺炎双球菌多重感染所致,这为规模化毛皮动物养殖场有效地控制疫病提供了理论依据。     

鱼类细菌性败血症发病鱼池细菌数量及致病性气单胞菌的初步研究

本文对细菌性败血症发病鱼池细菌数量及气单胞菌的数量、溶血性及致病力进行了研究。结果表明:水温在28.5℃以下时,细菌数量与水温基本成正比,发病池与不发病池的细菌数量无显著性差异;水体中广泛存在气单胞菌,其占水体总菌量比例随水温的上升而升高;发病池及未发病池中均存在能产生hec毒素和不产生hec毒素的嗜水气单胞菌株,两者数量上无显著差异;水体中存在血清型为TPS—30及PBJS—76的嗜水气单胞菌,且大多数对鱼体有毒力,以5×10~7CFU/尾腹腔注射,可使试验鱼大部分或全部发病死亡。