Identification of genotyping-by-sequencing sequence tags associated with milling performance and end-use quality traits in hard red spring wheat (Triticum aestivum L.)

Genotyping-by-sequencing (GBS) utilizes Next-Generation sequencing to genetically and physically map traits of interest. Here we use GBS to identify QTLs and SNP markers associated with milling and end-use quality traits in an hard red spring wheat recombinant inbred line (RIL) population. The RIL population and parents were phenotyped for eleven milling and end-use quality traits, and genotyped using GBS technology, simple sequence repeat (SSR) and allele specific sequence tagged site markers. A genetic map comprising 696 markers was used to map the end-use quality traits. Multiple QTL mapping identified 79 QTLs, 19 of which were declared ‘major’ as they explained greater than 15% of the phenotypic variance each. Transgressive segregants were observed for all phenotypes and co-locating QTLs controlling multiple quality traits were confirmed on chromosomes 1BL, 5AS, 7AS, 7AL and 7BS. To date, no GBS analysis to locate end-use quality QTLs in wheat has been conducted, thus the reporting and validation of these GBS sequence tags and their associated QTLs will shed light on the genetic architecture underlying these quantitative traits and assist wheat breeders in developing cultivars with favorable alleles through the use of marker assisted selection.     

Polymerisation of gluten proteins in developing wheat grain as affected by desiccation

The breadmaking quality of wheat is affected by the composition of gluten proteins and the polymerisation of subunits that are synthesised and accumulated in developing wheat grain. The biological mechanisms and time course of these events during grain development are documented, but not widely confirmed. Therefore, the aim of this study was to monitor the accumulation of gluten protein subunits and the size distribution of protein aggregates during grain development. The effect of desiccation on the polymerisation of gluten proteins and the functional properties of gluten were also studied. The results showed that the size of glutenin polymers remained consistently low until yellow ripeness (YR), while it increased during grain desiccation after YR. Hence, this polymerisation process was presumed to be initiated by desiccation. A similar polymerisation event was also observed when premature grains were dried artificially. The composition of gluten proteins, the ratios of glutenin to gliadin and high molecular weight-glutenin subunits to low molecular weight-glutenin subunits, in premature grain after artificial desiccation showed close association with the size of glutenin polymers in artificially dried grain. Functional properties of gluten in these samples were also associated with polymer size after artificial desiccation.     

Breeding for increased grain protein and micronutrient content in wheat: Ten years of the GPC-B1 gene

To provide food and nutrition security for a growing world population, continued improvements in the yield and nutritional quality of agricultural crops will be required. Wheat is an important source of calories, protein and micronutrients and is thus a priority to breed for improvements in these traits. The GRAIN PROTEIN CONTENT-B1 (GPC-B1) gene is a positive regulator of nutrient translocation which increases protein, iron and zinc concentration in the wheat grain. In the ten years since it was cloned, the impacts of GPC-B1 allelic variation on quality and yield traits have been extensively analyzed in diverse genetic backgrounds in field studies spanning forty environments and seven countries. In this review, we compile data from twenty-five studies to summarize the impact of GPC-B1 allelic variation on fifty different traits. Taken together, the results demonstrate that the functional copy of the GPC-B1 gene is associated with consistent positive effects on grain protein, Fe and Zn content with only marginally negative impacts on yield. We conclude that the GPC-B1 gene has the potential to increase nutritional and end use quality in a wide range of modern cultivars and environments and discuss the possibilities for its application in wheat breeding.     

A new lean no time test baking method with improved discriminating power

In response to customer concerns related to gluten strength in commercial baking, the Canadian Grain Commission assessed whether the Canadian Short Process (CSP) test bake method was generating useful data related to intrinsic strength of wheat varieties. Assessment of CSP loaf volume data for Canadian variety trials spanning 2003 to 2013 showed very little correlation with dough strength parameters as measured by farinograph and extensigraph. A lean no time (LNT) test baking method was developed that can better discriminate genotypes and provide objective indicators of the effect of intrinsic dough strength on baking quality. From early method development, through method validation and verification using diverse sets of samples targeting different Canadian wheat classes and grown in three different crop years, results showed the LNT method to be more discriminating and easily adopted by other laboratories. In 2015, the LNT method was adopted as the method of choice in future Canadian variety registration trials. The LNT method is fast, simple and well-suited to high throughput test baking conditions encountered in the evaluation of large numbers of breeder lines. A new objective parameter, loaf top ratio, was also introduced and found to correlate well with dough strength and dough handling properties.     

Comparison of growth,survivorship, seed production and shedding of eight weed species in a wheat crop in Western Australia

Development of integrated weed management strategies is dependent on a thorough knowledge of the demography of individual species. The current research established eight winter or summer weed species in a winter annual wheat cropping system at Wongan Hills, Western Australia, and investigated emergence of the first cohort of each species, survivorship, plant size, seed production and seed shedding over three years (2016–2019). The winter weeds Bromus diandrus and Lolium rigidum emerged at the same time as the wheat crop, and the initial cohort of marked plants had 100% survival to seed production in each year. By comparison, other winter weed species like Hordeum leporinum, Rumex hypogaeus, Sonchus oleraceus and Polygonum aviculare frequently emerged later than the crop and had a lower percentage of plants surviving to seed production. However, individual S. oleraceus and P. aviculare plants had the greatest seed production compared to other species. All winter weeds had variable patterns of seed shedding between years, with the exception of L. rigidum. Summer weed species emerged at the same time, but plants in the initial cohort of each species did not always survive to produce seed. The early emergence and high survivorship of B. diandrus indicates high competitive ability, but shedding commenced at a similar time to L. rigidum and harvest weed seed control may be a viable control method for this species.     

Waterlogging tolerance of pea at germination

Peas (Pisum sativum L.) are exposed to waterlogging at germination when grown as relay in rice‐based cropping. Ninety‐one germplasm accessions were evaluated in relay (sown in waterlogged soil), and subsequently 10 diverse genotypes compared under relay and sole cropping (conventional tillage sowing) over two seasons in Bangladesh. Contrasting genotypes, BM‐3, NL‐2 and Kaspa, were further evaluated in three waterlogging treatments (drained control, 4 and 8 days waterlogging) in the glasshouse. Conspicuous variation in waterlogging tolerance at germination was observed in the field and confirmed under controlled conditions. In relay sowing in 2011, emergence of a few genotypes was affected by waterlogging. In 2012, emergence in relay was severely affected (12 plants/m²) compared to sole sowing (37 plants/m²). Among genotypes BM‐3 had 6 plants/m² emerge, which all subsequently died, in contrast to NL‐2 in which emergence was 13 plants/m² with all plants surviving. In the glasshouse, there was 14% emergence in BM‐3, 40% in NL‐2 and 55% in Kaspa after 8 days of waterlogging. Such marked differences in waterlogging tolerance at germination in the model pea are the first reported and illustrate prospects for selection to improve adaptation to relay sowing in South Asia.