基因芯片及其在病原微生物检测中的应用

基因芯片是近年来迅速发展的一门生物高新技术,它以其能够快速、高效、大规模地同步检测生物遗传信息的卓越功能而得到发展。在基因测序、基因表达分析、药物筛选、基因诊断等领域显示出重要的理论和实用价值。作者就基因芯片技术的原理、技术要点以及在病原微生物检测中的应用作一综述。     

Digestive Physiology and the Role of Microorganisms

The gastrointestinal tract contains within it a microenvironment of bacteria that influences the host animal in many ways. The microflora can metabolize several nutrients that the host cannot digest and converts these to end products (such as short-chain fatty acids), a process that has a direct impact on digestive physiology. The microbiota directs the assembly of the gut-associated lymphoid tissue, helps educate the immune system, affects the integrity of the intestinal mucosal barrier, modulates proliferation and differentiation of its epithelial lineages, regulates angiogenesis, modifies the activity of the enteric nervous system, and plays a key role in extracting and processing nutrients consumed in the diet. Despite these important effects, the mechanisms by which the gut microbial community influences host biology remain almost entirely unknown. Recent molecular-based investigations have confirmed the species diversity and metabolic complexity of gut microflora, although there is much work to be done to understand how they relate to each other as well as the host animal. It is almost a century ago that Eli Metchnikoff proposed the revolutionary idea to consume viable bacteria to promote health. Since that time, the area known as probiotics has made dramatic progress, particularly during the past 2 decades. The last 20 yr have also seen the emergence of a new, related area of study—prebiotics. Use of these 2 ideas—providing live nonpathogenic bacteria as well as substrates for their growth—have potential to help optimize the health of animals by manipulating the gastrointestinal tract in positive ways.     

Innovative liquid formulation of digestates for producing a biofertilizer based on Bacillus siamensis: Field testing on sweet pepper

A biofertilizer (BF) based on the plant growth promoting rhizobacterium (PGPR) Bacillus siamensis was produced using anaerobic digestate (AD) as the main ingredient of the growth medium, alongside a carbon source from residual origin. The use of residues for the growth of PGPR reduces the production costs of biofertilizers, but makes an assessment of the possible toxicity of residues for the bacteria or plants necessary. Therefore, the growth medium of PGPR was first optimized using the response surface methodology (RSM), followed by phytotoxicity tests and a field trial of the BF in a sweet pepper (Capsicum annuum L.) crop at two different locations. AD at 50% dilution, supplemented with 2.3% sugar beet molasses, was the optimum growth medium for producing the BF, with a bacterial concentration of 10⁹ cfu mL⁻¹. In the field trial, the treatments inoculated with BF and fertilized with decreased mineral N (80%) produced significantly better yields per ha than the controls with decreased N (80%) and full N (100%) without BF. This indicates improved efficiency of N use by the crop, as a consequence of the use of BF.     

钴离子(Co~(2 ))对月季鲜切花生理结构的影响

在实验室常温条件下，将月季（ＲｏｓａＣｈｉｎｅｓｅｓｊａｃｑ．）鲜切花品种“萨蒙莎”置于２％蔗糖和不同浓度ＣｏＣｌ２溶液进行瓶插培养．在有蔗糖提供营养的基础上，Ｃｏ２＋可以延缓细胞膜差别透性的降低，抑制月季茎切口端和培养液微生物特别是真菌的生长，并能维持茎中央薄壁细胞和花瓣表面乳突状细胞的完整性，减少“弯颈”现象的发生．     

白蚁消化纤维素机理研究进展

白蚁利用自身及体内共生微生物分泌的纤维素酶降解食物中的纤维素成分,来满足新陈代谢需要.据美国国家生物技术信息中心GenBank数据库统计,目前已有4科6属9种白蚁及其体内共生物的纤维素酶基因被克隆测序.同源性分析表明,白蚁及其共生物编码内切β-1,4-葡聚糖酶的基因,在序列上有较高的相似性.     

油茶林土壤微生物生态分布及土壤酶活性的研究

为了了解油茶林土壤肥力状况，我们对株洲地区油茶林地土壤微生物数量和土壤酶活性进行了研究。研究结果表明：根际土壤中的细菌数量明显大于非根际土壤，根际土壤酶的活性高于非根际土壤；新造幼林地土壤微生物数量较萌芽更新林地多，土壤酶的活性也以新造幼林地较萌雅量更新林地土壤高；低改林地土壤微生物数量较未低改林地多，土壤酶的活性也以低改林地高。     

固定化微生物技术及其在污染土壤修复中的应用

固定化微生物技术是一种新的生物处理技术,与普通生物处理法相比有许多优点.本文对固定化微生物的制备方法、固定化微生物的载体、固定化微生物的反应特性以及固定化微生物技术在污染土壤治理中的应用和研究进展状况进行了综述,并对其今后的发展方向作了探讨.     

盐碱地白刺不同部位微生物群落高通量分析

【目的】研究新疆盐碱环境中耐盐植物白刺的根际土壤和叶片内生微生物群落的结构丰富度和多样性。【方法】运用Novaseq测序平台对白刺根际土壤和叶片进行16SrDNA-V4区和ITS1区测序。经FLASH进行拼接,经过Qiim过滤叶绿体和线粒体序列,得到的序列在97%的序列相似性水平上聚类成为操作分类单元(OTUs)。对序列数据进行生物信息学分析,评价物种的Chao1指数、shannon指数以及Alpha多样性。【结果】白刺根际土壤细菌优势菌群为放线菌门(Actinobacteria)、变形菌门(Proteobacteria)、芽单胞菌门(Gemmatimonadetes);真菌优势菌群为子囊菌门(Ascomycota)。叶片内生细菌优势菌群为蓝细菌门(Cyanobacteria)和放线菌门(Actinobacteria);真菌优势菌群为子囊菌门(Ascomycota),白刺不同部位的微生物菌群数量和多样性有显著差异(P<0.05),白刺各样地之间微生物群落构成差异明显。【结论】白刺不同部位微生物群落的丰富度和多样性分布。     

丛枝菌根真菌改善镉胁迫下植物根系和土壤微环境的效应

为探究Cd胁迫下丛枝菌根真菌(AMF)对植物根系和土壤微环境的影响,以黑麦草为供试植物、变形球囊霉(Glomus versiforme)为供试AMF,以Cd浓度(0、10、20、30 mg·kg^-1)和是否对黑麦草接种AMF为双因素,设计8个处理,开展盆栽试验。结果显示:随着Cd浓度增加,AMF侵染率和孢子数量显著(P<0.05)降低。相同Cd浓度下,接种AMF显著(P<0.05)改善了黑麦草的根系构型(根系总长度、根系总投影面积、根系总体积、根尖数、根分叉数)。在相同Cd浓度下,接种AMF显著(P<0.05)增加了土壤中真菌、细菌和放线菌的数量,土壤微生物生物量碳、微生物生物量氮含量,以及土壤多酚氧化酶活性,和土壤易提取球囊霉素相关土壤蛋白和总球囊霉素相关土壤蛋白含量。这说明,接种AMF能够通过改善植物根系和微生物环境、提高土壤相关酶活性和球囊霉素含量等,增加植物抗性。     

白柿在广东地区的引种表现及栽培技术

【目的】研究小生境下园林绿化植物叶际细菌群落结构及其多样性,了解小生境下相似环境条件 与植物自身特性对微生物群落的影响,为园林植物的健康管理及叶际细菌资源的挖掘提供参考。【方法】应用 高通量测序技术,探究大理大学校园 50 m 半径圆内朝向东边的 3 种主要园林植物 （枇杷树 Eriobotyra japonica、 广玉兰 Magnolia grandifl ora 和大青树 Ficus altissima）的叶际细菌群落结构及其多样性。【结果】 3 种园林植 物的叶际细菌多样性从高到低依次为枇杷树、广玉兰和大青树;不同植物的叶际细菌优势门类均为变形菌门 （Proteobacteria）,第一优势细菌属不同,但排名前五的细菌属均为鞘氨醇单胞菌属（Sphingomonas）、甲基杆 菌属（Methylobacterium）、螺状菌属（Spirosoma）、薄层菌属（Hymenobacter）和无色菌属（Achromobacter）。 3 种植物的叶际细菌群落结构存在较大差异,但同一植物不同大小叶片间的细菌群落相似,其中,仅在枇杷树和 广玉兰叶片上分布的细菌群落门和属最多,表明常绿阔叶植物的叶际细菌群落相较于落叶阔叶植物更多样、复杂。 【结论】不同园林植物的叶际细菌群落组成和多样性存在较大差异, 植物自身特性是造成这种差异的首要原因, 植物叶际细菌 资源的挖掘有待加强。