We have extracted information on the habitats of bigeye (Thunnus obesus), skipjack (Katsuwonus pelamis) and yellowfin (Thunnus albacares) in the Eastern Tropical Pacific Ocean by matching the spatial‐temporal distribution of catch and effort of purse seine and longline fleets collected by the Inter‐American Tropical Tuna Commission with oceanographic conditions and subjecting the matched data to Quotient Analysis and General Additive Models (GAMs). These analyses yielded the following results. The habitats defined by the GAM analysis of young fish differ significantly between two periods, one before and one after the introduction of fish aggregation devices (FADs). This was not true for the older fish caught by longline. We speculate that these changes were caused by the extensive use of FADs. Younger bigeye and yellowfin caught by the purse seine fleet have a different preference of environmental variables compared to older fish caught by longline. This is to be expected since tuna of different age groups have different sizes, metabolic capabilities and swimming skills. Moreover, as revealed by GAMs, the habitats of young fish differ between species to a much larger degree than those of older fish. Our results indicate the fundamental differences between fishing methods, targeted species, and operating region of the two fisheries. Specifically, young bigeye occupy equatorial waters farther from the coast and where the hypoxic layer is deeper, young skipjack occupy more productive waters associated with equatorial and coastal upwelling, and young yellowfin occupy broad areas where waters are underlain by a shallow hypoxic layer. 相似文献
The objectives of this study were to estimate the environmental and additive and non-additive genetic effects on lactation curve and lactation parameters of crosses of Holstein (H), Brahman (B) and Brown Swiss (BS) in Olancho region in Honduras. The data consisted of 54,517 milk yield records from 192 dual-purpose crossbred cows lactating from 2000 to 2005 at the Universidad Nacional de Agricultura de Honduras (UNA). The lactation curve and lactation parameters of interest were the scaling factor to represent yield at the beginning of lactation (a), the factor associated with the inclining (b) and declining (c) slopes of the lactation curves, and the milk yield at initial day of lactation (MY20), peak milk yield (MYmax), day at peak milk yield (tmax), and the total milk yield (TM) per lactation, respectively. The incomplete gamma function (Wood function) was used to estimate lactation curve and lactation parameters from daily milk records of H × B, H × BS and BS × B crossbred cows. The environmental, additive and non-additive genetic effects on lactation curve and lactation parameters were estimated using Dickerson and Kinghorn models. The coefficients of determination of fitness of Wood's function (R2) ranged from 80% to 97% with an average of 93%. The lactation curve of the crossbred cows was similar to those reported for dairy cows grazing in the tropics. Lactation parameters such as MYmax, tmax and TM were significantly (P < 0.05) influenced by environmental sources of variation suggesting the necessity of differential management strategies. The moderate to large positive phenotypic correlation of MYmax and TM indicate that one of the milk yield parameters could be used as a selection criterion to improve either one or both traits. Despite the fact that both genetic models showed similar patterns, the absolute value of the parameters varied. For both models, individual additive genetic breed effect for H breed were significant (P < 0.05) and contributed more to TM than the BS breed. In the Dickerson model, highly positive significant (P < 0.01) effect on TM for H×BS and BS×B crosses was found. The Kinghorn model did not show significant effects of dominance on this parameter. The estimate of recombination effect for all crosses involving B breed were negative and significant (P < 0.05) for positive correlated lactation curve parameters. Although the inclusion of non-additive effects on crossbreeding genetic effects were not all significant for lactation curve and lactation parameters, non-additive effects should be taken into account to improve the Honduran dairy cattle production management. 相似文献
1.?A study was conducted to study direct dominance genetic and maternal effects on genetic evaluation of production traits in dual-purpose chickens. The data set consisted of records of body weight and egg production of 49 749 Mazandaran fowls from 19 consecutive generations. Based on combinations of different random effects, including direct additive and dominance genetic and maternal additive genetic and environmental effects, 8 different models were compared.
2.?Inclusion of a maternal genetic effect in the models noticeably improved goodness of fit for all traits. Direct dominance genetic effect did not have noticeable effects on goodness of fit but simultaneous inclusion of both direct dominance and maternal additive genetic effects improved fitting criteria and accuracies of genetic parameter estimates for hatching body weight and egg production traits.
3.?Estimates of heritability (h2) for body weights at hatch, 8 weeks and 12 weeks of age (BW0, BW8 and BW12, respectively), age at sexual maturity (ASM), average egg weights at 28–32 weeks of laying period (AEW), egg number (EN) and egg production intensity (EI) were 0.08, 0.21, 0.22, 0.22, 0.21, 0.09 and 0.10, respectively. For BW0, BW8, BW12, ASM, AEW, EN and EI, proportion of dominance genetic to total phenotypic variance (d2) were 0.06, 0.08, 0.01, 0.06, 0.06, 0.08 and 0.07 and maternal heritability estimates (m2) were 0.05, 0.04, 0.03, 0.13, 0.21, 0.07 and 0.03, respectively. Negligible coefficients of maternal environmental effect (c2) from 0.01 to 0.08 were estimated for all traits, other than BW0, which had an estimate of 0.30.
4.?Breeding values (BVs) estimated for body weights at early ages (BW0 and BW8) were considerably affected by components of the models, but almost similar BVs were estimated by different models for higher age body weight (BW12) and egg production traits (ASM, AEW, EN and EI). Generally, it could be concluded that inclusion of maternal effects (both genetic and environmental) and, to a lesser extent, direct dominance genetic effect would improve the accuracy of genetic evaluation for early age body weights in dual-purpose chickens.
In the Eastern Tropical Pacific (ETP), a region of high fishing activity, olive ridley (Lepidochelis olivacea) and other sea turtles are accidentally caught in fishing nets with tuna and other animals. To date, the interaction between fishing activity, ocean conditions and sea turtle incidental catch in the ETP has been described and quantified, but the factors leading to the interaction of olive ridleys and fishing activity are not well understood. This information is essential for the development of future management strategies that avoid bycatch and incidental captures of sea turtles. We used Generalized additive models (GAM) to analyze the relationship between olive ridley incidental catch per unit effort (iCPUE) in the ETP purse‐seine fisheries and environmental conditions, geographic extent and fishing set type (associated with dolphins, floating objects or in free‐swimming tuna schools). Our results suggest that water temperature, set type and geographic location (latitude, longitude and distance to nesting beaches) are the most important predictor variables to describe the probability of a capture event, with the highest iCPUE observed in sets made over floating objects. With the environmental predictors used, sea surface temperatures (SST) of 26–30°C and chlorophyll‐a (chl‐a) concentrations <0.36 mg m?3 were associated with the highest probability of an incidental catch. Temporally, the highest probability of an incidental catch was observed in the second half of the year (June to December). Four regions were observed as high incidental catch hotspots: North and south of the equator between 0–10°N; 0–10°S and from 120 to 140°W; and along the Colombian coast and surrounding regions. 相似文献