Carbon fluxes in soil food webs of increasing complexity revealed by C labelling and C natural abundance

Soil food webs are mainly based on three primary carbon (C) sources: root exudates, litter, and recalcitrant soil organic matter (SOM). These C sources vary in their availability and accessibility to soil organisms, which could lead to different pathways in soil food webs. The presence of three C isotopes (¹²C, ¹³C and ¹⁴C) offers an unique opportunity to investigate all three C sources simultaneously. In a microcosm experiment we studied the effect of food web complexity on the utilization of the three carbon sources. We choose an incomplete three factorial design with (i) living plants, (ii) litter and (iii) food web complexity. The most complex food web consisted of autochthonous microorganisms, nematodes, collembola, predatory mites, endogeic and anecic earthworms. We traced C from all three sources in soil, in CO₂ efflux and in individual organism groups by using maize grown on soil developed under C₃ vegetation and application of ¹⁴C labelled ryegrass shoots as a litter layer. The presence of living plants had a much greater effect on C pathways than food web complexity. Litter decomposition, measured as ¹⁴CO₂ efflux, was decreased in the presence of living plants from 71% to 33%. However, living plants increased the incorporation of litter C into microbial biomass and arrested carbon in the litter layer and in the upper soil layer. The only significant effect of food web complexity was on the litter C distribution in the soil layers. In treatments with fungivorous microarthropods (Collembola) the incorporation of litter carbon into mineral soil was reduced. Root exudates as C source were passed through rhizosphere microorganisms to the predator level (at least to the third trophic level). We conclude that living plants strongly affected C flows, directly by being a source of additional C, and indirectly by modifying the existing C flows within the food web including CO₂ efflux from the soil and litter decomposition.     

Cover crop effect on soil carbon fractions under conservation tillage cotton

Cover crops may influence soil carbon (C) sequestration and microbial biomass and activities by providing additional residue C to soil. We examined the influence of legume [crimson clover (Trifolium incarnatum L.)], nonlegume [rye (Secale cereale L.)], blend [a mixture of legumes containing balansa clover (Trifolium michelianum Savi), hairy vetch (Vicia villosa Roth), and crimson clover], and rye + blend mixture cover crops on soil C fractions at the 0–150 mm depth from 2001 to 2003. Active fractions of soil C included potential C mineralization (PCM) and microbial biomass C (MBC) and slow fraction as soil organic C (SOC). Experiments were conducted in Dothan sandy loam (fine-loamy, kaolinitic, thermic, Plinthic Kandiudults) under dryland cotton (Gossypium hirsutum L.) in central Georgia and in Tifton loamy sand (fine-loamy, siliceous, thermic, Plinthic Kandiudults) under irrigated cotton in southern Georgia, USA. Both dryland and irrigated cotton were planted in strip tillage system where planting rows were tilled, thereby leaving the areas between rows untilled. Total aboveground cover crop and cotton C in dryland and irrigated conditions were 0.72–2.90 Mg C ha⁻¹ greater in rye + blend than in other cover crops in 2001 but was 1.15–2.24 Mg C ha⁻¹ greater in rye than in blend and rye + blend in 2002. In dryland cotton, PCM at 50–150 mm was greater in June 2001 and 2002 than in January 2003 but MBC at 0–150 mm was greater in January 2003 than in June 2001. In irrigated cotton, SOC at 0–150 mm was greater with rye + blend than with crimson clover and at 0–50 mm was greater in March than in December 2002. The PCM at 0–50 and 0–150 mm was greater with blend and crimson clover than with rye in April 2001 and was greater with crimson clover than with rye and rye + blend in March 2002. The MBC at 0–50 mm was greater with rye than with blend and crimson clover in April 2001 and was greater with rye, blend, and rye + blend than with crimson clover in March 2002. As a result, PCM decreased by 21–24 g CO₂–C ha⁻¹ d⁻¹ but MBC increased by 90–224 g CO₂–C ha⁻¹ d⁻¹ from June 2001 to January 2003 in dryland cotton. In irrigated cotton, SOC decreased by 0.1–1.1 kg C ha⁻¹ d⁻¹, and PCM decreased by 10 g CO₂–C ha⁻¹ d⁻¹ with rye to 79 g CO₂–C ha⁻¹ d⁻¹ with blend, but MBC increased by 13 g CO₂–C ha⁻¹ d⁻¹ with blend to 120 g CO₂–C ha⁻¹ d⁻¹ with crimson clover from April 2001 to December 2002. Soil active C fractions varied between seasons due to differences in temperature, water content, and substrate availability in dryland cotton, regardless of cover crops. In irrigated cotton, increase in crop C input with legume + nonlegume treatment increased soil C storage and microbial biomass but lower C/N ratio of legume cover crops increased C mineralization and microbial activities in the spring.     

C and N natural abundance of the soil microbial biomass

Stable isotope analysis is a powerful tool in the study of soil organic matter formation. It is often observed that more decomposed soil organic matter is ¹³C, and especially ¹⁵N-enriched relative to fresh litter and recent organic matter. We investigated whether this shift in isotope composition relates to the isotope composition of the microbial biomass, an important source for soil organic matter. We developed a new approach to determine the natural abundance C and N isotope composition of the microbial biomass across a broad range of soil types, vegetation, and climates. We found consistently that the soil microbial biomass was ¹⁵N-enriched relative to the total (3.2 ‰) and extractable N pools (3.7 ‰), and ¹³C-enriched relative to the extractable C pool (2.5 ‰). The microbial biomass was also ¹³C-enriched relative to total C for soils that exhibited a C3-plant signature (1.6 ‰), but ¹³C-depleted for soils with a C4 signature (−1.1 ‰). The latter was probably associated with an increase of annual C3 forbs in C4 grasslands after an extreme drought. These findings are in agreement with the proposed contribution of microbial products to the stabilized soil organic matter and may help explain the shift in isotope composition during soil organic matter formation.     

Influence of thiosulfate on nitrification,denitrification, and production of nitric oxide and nitrous oxide in soil

Thiosulfate and CS₂ inhibit nitrification. The effect of the addition of thiosulfate on the turnover of inorganic N compounds was tested in an Egyptian and a German arable soil under nitrifying and denitrifying conditions. For nitrification, the soils were amended with NH _inf4 ^sup+ and incubated under aerobic conditions. For denitrification, the soils were amended with NO _inf3 ^sup- and incubated under anaerobic conditions. In both cases, the thiosulfate decreased with time while tetrathionate accumulated to an intermediate extent. Both compounds disappeared completely after <25 days. Production of CS₂ was not observed. Carbonyl sulfide was produced only in the Egyptian soil, but production decreased with increasing amounts of added thiosulfate. Under nitrifying conditions, the addition of increasing amounts of thiosulfate (25, 50, and 100 g S g^-1 dry weight) resulted in decreasing rates of NH _inf4 ^sup+ oxidation to NO _inf3 ^sup- ; it also resulted in an increasing intermediate accumulation of NO _inf2 ^sup- and NO, and in an increasing production of N₂O. Under denitrifying conditions, the addition of increasing amounts of thiosulfate did not significantly affect the rate of NO _inf3 ^sup- reduction, and resulted in an increasing intermediate accumulation of NO _inf2 ^sup- and of NO only in the German soil in which the production of N₂O was slightly inhibited by thiosulfate. These results demonstrate that the nitrification of NH _inf4 ^sup+ and NO _inf2 ^sup- was inhibited by increasing concentrations of thiosulfate and/or tetrathionate without involving the formation of volatile S compounds as potential nitrification inhibitors. Denitrification was not affected by the addition of thiosulfate.     

参与碳氮磷转化的水解酶对不同施肥响应的差异

本文旨在研究土壤水解酶对不同施肥的响应差异以及影响因素。通过在红壤中添加牛粪有机肥、化肥进行90d的室内土壤培养试验,采用微孔板荧光法动态分析5、30和90d参与碳氮磷转化的土壤水解酶(α-1,4-葡萄糖苷酶、β-1,4-葡萄糖苷酶、纤维素酶、木聚糖酶、亮氨酸氨基肽酶、β-1,4-N-乙酰氨基葡萄糖苷酶、磷酸酶)活性。与不施肥(对照)相比,在30 d后,化肥处理的总酶活性显著下降,对应的参与碳氮磷转化酶活性均有不同程度下降;而有机肥处理的总酶活性在培养期内均未发生显著变化,但是其α-1,4-葡萄糖苷酶显著增加,而磷酸酶活性显著降低。参与碳转化的4种水解酶中,只有α-1,4-葡萄糖苷酶活性对施肥的响应较强,且施加有机肥增加其活性而无机肥则降低其活性;对于参与氮转化的水解酶而言,化肥明显抑制了亮氨酸氨基肽酶活性,而有机肥增加了β-1,4-N-乙酰氨基葡萄糖苷酶活性;磷酸酶活性明显受到有机肥的抑制作用,而对化肥的响应总体不明显。不同水解酶对不同施肥的响应有明显差异,NMDS分析表明,α-1,4-葡萄糖苷酶和亮氨酸氨基肽酶响应最明显,其次为磷酸酶与木聚糖酶;相关和冗余分析显示,土壤p H、可溶性有机碳对酶活性的影响最大,一定程度说明了不同肥料通过影响土壤理化性质进而影响水解酶活性。     

Organic C and N stabilization in a forest soil: Evidence from sequential density fractionation

In mineral soil, organic matter (OM) accumulates mainly on and around surfaces of silt- and clay-size particles. When fractionated according to particle density, C and N concentration (per g fraction) and C/N of these soil organo-mineral particles decrease with increasing particle density across soils of widely divergent texture, mineralogy, location, and management. The variation in particle density is explained potentially by two factors: (1) a decrease in the mass ratio of organic to mineral phase of these particles, and (2) variations in density of the mineral phase. The first explanation implies that the thickness of the organic accumulations decreases with increasing particle density. The decrease in C/N can be explained at least partially by especially stable sorption of nitrogenous N-containing compounds (amine, amide, and pyrrole) directly to mineral surfaces, a phenomenon well documented both empirically and theoretically. These peptidic compounds, along with ligand-exchanged carboxylic compounds, could then form a stable inner organic layer onto which other organics could sorb more readily than onto the unconditioned mineral surfaces (“onion” layering model).To explore mechanisms underlying this trend in C concentration and C/N with particle density, we sequentially density fractionated an Oregon andic soil at 1.65, 1.85, 2.00, 2.28, and 2.55 g cm⁻³ and analyzed the six fractions for measures of organic matter and mineral phase properties.All measures of OM composition showed either: (1) a monotonic change with density, or (2) a monotonic change across the lightest fractions, then little change over the heaviest fractions. Total C, N, and lignin phenol concentration all decreased monotonically with increasing density, and ¹⁴C mean residence time (MRT) increased with particle density from ca. 150 years to >980 years in the four organo-mineral fractions. In contrast, C/N, ¹³C and ¹⁵N concentration all showed the second pattern. All these data are consistent with a general pattern of an increase in extent of microbial processing with increasing organo-mineral particle density, and also with an “onion” layering model.X-ray diffraction before and after separation of magnetic materials showed that the sequential density fractionation (SDF) isolated pools of differing mineralogy, with layer-silicate clays dominating in two of the intermediate fractions and primary minerals in the heaviest two fractions. There was no indication that these differences in mineralogy controlled the differences in density of the organo-mineral particles in this soil. Thus, our data are consistent with the hypothesis that variation in particle density reflects variation in thickness of the organic accumulations and with an “onion” layering model for organic matter accumulation on mineral surfaces. However, the mineralogy differences among fractions made it difficult to test either the layer-thickness or “onion” layering models with this soil. Although SDF isolated pools of distinct mineralogy and organic-matter composition, more work will be needed to understand mechanisms relating the two factors.     

Constraints on development of fungal biomass and decomposition processes during restoration of arable sandy soils

In an earlier study we reported the apparent stabilization of a low fungal biomass in ex-arable lands during the first decades after abandonment. It was hypothesized that the lack of increase in fungal biomass was due to constraints on development of fungi with persistent hyphae such as lignocellulolytic basidiomycetes and ericoid mycorrhizal fungi. With respect to the former group, the slow increase of the pool of lignocellulose-rich organic matter was expected to be the major constraint for their development. To study this, we enriched soil samples of one arable land, of two recently abandoned arable lands, of one older abandoned arable land and of heathland with carbon substrates that differed in composition (glucose, cellulose and sawdust). In addition, we combined the effect of carbon addition on fungal biomass development in arable and recently abandoned lands with inoculation of 1% of soil from the older abandoned site and the heathland. All treatments induced a fast increase and a subsequent rapid decline in fungal biomass in the arable and ex-arable fields. Denaturing Gradient Gel Electrophoresis (DGGE) band patterns and enzyme activities did show differences between the carbon treatments but not between the recent and older abandoned field sites, indicating a similarly responding fungal community even after three decades of land abandonment and irrespective of soil inoculation. Identification of fungi by sequencing and culturing confirmed that decomposition processes were mostly dominated by opportunistic fungi in arable and ex-arable fields. In the heathland, only a very slow increase of microbial activity was observed after addition of carbon and sequencing of DGGE bands showed that ericoid mycorrhiza (ERM) fungi were responsible for carbon decomposition. We conclude that an increase of enduringly present fungal hyphae in ex-arable land may only be possible when a separate litter layer develops and/or when suitable host plants for ERM fungi become established.     

紫云英添加对土壤团聚体组成及有机碳分布的影响

以湖北省武汉市稻田土壤为研究对象,分别设置不添加紫云英(CK)、添加2%土壤质量的紫云英(G1)、添加4%土壤质量的紫云英(G2)3个处理,进行干湿交替模拟培养试验,研究培养60、120和180d土壤团聚体组成及团聚体内有机碳的分布特征。结果表明:添加紫云英培养120 d增加了各处理2 mm团聚体含量,培养60 d时G1处理的增幅最大(78.08%),培养120 d时G2处理的增幅最大(77.31%),且显著提高了团聚体的平均重量直径。不同培养时期添加紫云英均提高了土壤的有机碳含量,且G2处理土壤有机碳含量高于G1处理,各处理随着培养时间的增加有机碳含量先增加后降低。团聚体中有机碳含量均随着粒级的减小而降低,紫云英添加培养180 d时团聚体各粒级有机碳含量均有所提升,且2 mm团聚体的有机碳含量增幅最大(17.17%～43.67%)。紫云英添加培养120 d时主要增加大团聚体内各有机碳组分的相对含量,180 d时显著增加了微团聚体内细颗粒有机碳的含量。     

实验条件下人工气候舱内的气体质量分析

为规范科研实验条件，更好地为现代畜牧业产业化服务，检验了农业部动物营养学重点开放实验室程控式人工气候舱（简称环控舱）的通风系统的功能，对装载动物的环控舱在正常运转５ｄ以上的气体成分进行分析。测定结果表明舱内的氨气和二氧化碳浓度分别为１１．３～１９．７ｍＬ／ｍ３和８９０～１４００ｍＬ／ｍ３，均低于家畜卫生标准，但鸡试验舱在上午开舱门清粪前的氨气浓度和猪试验舱的二氧化碳浓度较高，接近了卫生标准的上限值。