Updated Trends on the Biodiscovery of New Marine Natural Products from Invertebrates

From 1990–2019, a total of 15,442 New Marine Natural Products from Invertebrates (NMNPIs) were reported. The 2010s saw the most prolific decade of biodiscovery, with 5630 NMNPIs recorded. The phyla that contributed most biomolecules were the Porifera (sponges) (47.2%, 2659 NMNPIs) and the Cnidaria (35.3%, 1989 NMNPIs). The prevalence of these two phyla as the main sources of NMNPIs became more pronounced in the 2010s. The tropical areas of the Pacific Ocean yielded more NMNPIs, most likely due to the remarkable biodiversity of coral reefs. The Indo-Burma biodiversity hotspot (BH) was the most relevant area for the biodiscovery of NMNPIs in the 2010s, accounting for nearly one-third (1819 NMNPIs) of the total and surpassing the top BH from the 1990s and the 2000s (the Sea of Japan and the Caribbean Islands, respectively). The Chinese exclusive economic zone (EEZ) alone contributed nearly one-quarter (24.7%) of all NMNPIs recorded during the 2010s, displacing Japan’s leading role from the 1990s and the 2000s. With the biodiscovery of these biomolecules steadily decreasing since 2012, it is uncertain whether this decline has been caused by lower bioprospecting efforts or the potential exhaustion of chemodiversity from traditional marine invertebrate sources.     

Atmospheric methane and nitrous oxide of the Late Pleistocene from Antarctic ice cores

The European Project for Ice Coring in Antarctica Dome C ice core enables us to extend existing records of atmospheric methane (CH4) and nitrous oxide (N2O) back to 650,000 years before the present. A combined record of CH4 measured along the Dome C and the Vostok ice cores demonstrates, within the resolution of our measurements, that preindustrial concentrations over Antarctica have not exceeded 773 +/- 15 ppbv (parts per billion by volume) during the past 650,000 years. Before 420,000 years ago, when interglacials were cooler, maximum CH4 concentrations were only about 600 ppbv, similar to lower Holocene values. In contrast, the N2O record shows maximum concentrations of 278 +/- 7 ppbv, slightly higher than early Holocene values.     

DRIS norms and limiting nutrients in banana cultivation in the South of Ecuador

Abstract

Foliar analysis is an effective method to diagnose the nutritional status of plants. However, the mineral concentration in foliar tissue has traditionally been evaluated by assessing the activity of each element, without considering the interactions between them. To address this, dual interactions were calculated using the Diagnosis and Recommendation Integrated System (DRIS) to identify which crop nutrients are most influential in nutrient imbalances and which are the most limiting nutrients for the nutritional status of banana crops in Ecuador. To achieve this, a regional survey of the nutritional status and its productivity levels was conducted for 188 different sites during the crop season in 2017–2018, involving banana cultivars ‘Vallery’ and ‘Williams’, from the Cavendish subgroup. The DRIS calculation method was combined with Beaufils and Jones functions. From the initial 188 foliar samples, 83 samples (representing 44% of the population) were considered to represent the high-yield reference population, with yields of 38–60 t ha^?1. The DRIS method defined the mean nutritional balance index, which was not found to be statistically correlated (p?>?0.05) with productivity, revealing that there was no significant association with the nutritional status of the plants. Specific DRIS norms were obtained and indicated that deficiencies in K, N, Ca, and Fe, and excesses in Mn, B, Cl, Zn, S, Cu, and Mg were the most limiting nutrients for banana cultivars in the south of Ecuador.     

Physiological and metabolic properties of a digestion-resistant maltodextrin, classified as type 3 retrograded resistant starch

There is a growing interest in highly fermentable dietary fibers having the potential to reduce risks of disease through the production of short-chain fatty acids (SCFA). Recently a digestion-resistant retrograded maltodextrin (RRM), classified as type 3 resistant starch was developed. Systematic work to determine its molecular and physiological properties was carried out to determine (1) the fraction resistant to digestion in vitro and in vivo, (2) its postconsumption effect on blood glucose in healthy volunteers, and (3) its in vitro fermentation pattern, at different ages, by use of pooled fresh human fecal inoculum. RESULTS: The digestion resistant fraction obtained in vivo from ileostomy patients (59.4%) is similar to that obtained by the AOAC method for measuring retrograded resistant starch (59.7%). The relative glycemic response after consumption of 50 g of RRM was 58.5% compared to glucose set as 100%. When exposed to colonic microbiota, in vitro obtained indigestible fractions behave similarly to those obtained in vivo in ileostomy patients. Fermentation of RRM and production of butyric acid is negligible during the first months of life but develops subsequently during weaning. In adults, RRM fermentation results in a high yield of SCFA, with butyrate representing 21-31 mol % of total SCFA. The high yield of SCFA during colonic fermentation, observed from weaning age on, as well as the potential to help reduce glycemic load may be of benefit to a number of health-related functions in the host. Further study on clear clinical end points is warranted.     

Atmospheric Stability and Meteorological Scenarios as Inputs to Air Pollution Transport Modeling

Meteorological scenarios concerning the data required for engineering applications of pollutant transport modeling in the low layers of troposphere are defined through a simple methodology. This involves only data at soil surface and substantially relies on the determination of atmospheric stability carried out through fictitious vertical profiles of air temperature considered as representative of the actual vertical profiles in a study area. This assumption is supported by comparisons of fictitious vertical profiles, obtained by measurements of air temperature at soil surface but at different heights above sea level, and the temperature vertical profiles observed by the radio-sounding station closer to the study area. The fictitious profiles are first used to derive the usual classes of atmospheric stability as unstable atmosphere, neutral atmosphere, stable atmosphere, thermal inversion at the surface and thermal inversion in the upper layers. Then, each scenario is determined through the classes of atmospheric stability observed at 06.00 GMT and 15.00 GMT together with the experimental data of air temperature, relative humidity, wind speed, wind direction, and cloud cover, all averaged in the period of investigation of a few years. An area of Central Italy, where the meteorological measurements for a period of 7 years were available, has been selected for this study.     

Isolation and characterization of a Mn(II)-oxidizing Bacillus strain from the demosponge Suberites domuncula

In this study we demonstrate that the demosponge Suberites domuncula harbors a Mn(II)-oxidizing bacterium, a Bacillus strain, termed BAC-SubDo-03. Our studies showed that Mn(II) stimulates bacterial growth and induces sporulation. Moreover, we show that these bacteria immobilize manganese on their cell surface. Comparison of the 16S rDNA sequence allowed the grouping of BAC-SubDo-03 to the Mn-precipitating bacteria. Analysis of the spore cell wall revealed that it contains an Mn(II)-oxidizing enzyme. Co-incubation studies of BAC-SubDo-03 with 100 μM MnCl(2) and >1 μM of CuCl(2) showed an increase in their Mn(II)-oxidizing capacity. In order to prove that a multicopper oxidase-like enzyme(s) (MCO) exists in the cell wall of the S. domuncula-associated BAC-SubDo-03 Bacillus strain, the gene encoding this enzyme was cloned (mnxG-SubDo-03). Sequence alignment of the deduced MCO protein (MnxG-SubDo-03) revealed that the sponge bacterium clusters together with known Mn(II)-oxidizing bacteria. The expression of the mnxG-SubDo-03 gene is under strong control of extracellular Mn(II). Based on these findings, we assume that BAC-SubDo-03 might serve as a Mn reserve in the sponge providing the animal with the capacity to detoxify Mn in the environment. Applying the in vitro primmorph cell culture system we could demonstrate that sponge cells, that were co-incubated with BAC-SubDo-03 in the presence of Mn(II), show an increased proliferation potential.     

The attenuated sopB mutant of Salmonella enterica serovar Typhimurium has the same tissue distribution and host chemokine response as the wild type in bovine Peyer's patches

Salmonella enterica serovar Typhimurium is an important cause of enteric infections in farm animals and it is one of the most frequent food borne infections worldwide. Serovar Typhimurium lacking the sopB gene is attenuated for induction of host inflammatory response and fluid accumulation into the intestinal lumen, which correlates with clinical diarrhea. SopB is an inositol phosphate phosphatase, but its exact role in the pathogenesis of salmonellosis is still unclear. We employed the bovine ileal ligated loop model to compare the tissue distribution of a sopB mutant and its wild type parent serovar Typhimurium. Sections of the Peyer's patches were histologically processed and immuno-stained for detection of serovar Typhimurium. In addition, samples were processed for transmission electron microscopy, and the profile of expression of host chemokine and cytokine responses was assessed. Ultrastructurally both strains had the same ability to invade intestinal epithelial cells. No differences were detected in the tissue distribution of the sopB mutant and the wild type organism and both strains elicited the same profile of chemokines and pro-inflammatory cytokines. In conclusion, our results indicate that the attenuation of the sopB mutant is associated with pathogenic mechanisms other than invasion and distribution in host intestinal tissues.     

Spectrophotometric evidence for the solubilization site of betalain pigments in membrane biomimetic systems

The solubilization site of two betalain pigments, namely, betanin and indicaxantin, into l-alpha-dipalmitoyl-phosphatidylcholine (DPPC) and dimyristoylphosphatidylcholine (DMPC) vesicles was investigated by a spectrophotometric study. Pigment absorbance was monitored by varying phospholipid concentration, at a constant temperature that was varied in a range including the main phase transition temperature (Tm) of the relevant phospholipid bilayer. Maximum betanin absorption increased with the increase of DPPC concentration within the entire temperature range, reaching a plateau. The binding constant (Kb) of the pigment, calculated according to a pseudo-two-phase model, varied with the temperature, indicating that betanin is located at the hydrophobic interior of the bilayer. Other measurements of binding of betanin to DMPC and of indicaxanthin to either DPPC or DMPC vesicles ruled out that these compounds were solubilized in the hydrophobic interior of these bilayers.     

Development and distribution of intestinal enzymatic activity in Paralabrax maculatofasciatus (Steindachner, 1868) larvae fed with live prey

We describe the development and distribution of intestinal aminopeptidase M, dipeptidyl aminopeptidase IV, non-specific esterase, alkaline phosphatase and acid phosphatase, using enzyme histochemistry techniques, in the spotted sand bass larvae ( Paralabrax maculatofasciatus ) under culture conditions. All digestive enzymes tested showed a positive reaction from first feeding (day 2) and throughout the study period (day 30). At first feeding, the main enzymatic activity was in the mucosa throughout the intestines. Later, enzymatic activity occurred in the liver, kidney and stomach. All enzymatic activities increased from days 15 to 20, remaining constant until the end of the study. This enzymatic activity suggests the onset of maturation of the digestive tract. After day 20, a positive reaction was recorded in the pyloric caeca for all tested enzymatic activities. Our study confirms the digestive and absorptive functions in the intestines in spotted sand bass larvae from first feeding. It also brings new insight to establish an early weaning strategy during cultivation of spotted sand bass larvae.     

Growth performance of weaning red abalone (Haliotis rufescens) fed with Macrocystis pyrifera plantlets and Porphyra columbina compared with a formulated diet

A feeding experiment was carried out to evaluate two natural diets versus a formulated feed on the performance of weaning red abalone Haliotis rufescens . Four treatment diets were then investigated: a formulated diet; plantlets from culture Macrocystis pyrifera, Porphyra columbina from natural beds; and a mixed diet consisting of a blend of fresh P. columbina together with the formulated diet. This study was performed in a shallow aquaculture system with a horizontal water flow. After 90 days, significant differences were observed between treatments. The highest growth was obtained with Porphyra (3.3 mm month⁻¹), followed by the mixed diet (2.6 mm month⁻¹), then Macrocystis (2.1 mm month⁻¹) and lastly the formulated diet (1.4 mm month⁻¹). Moreover, after the diets were tested for stability and remnant nutrients after a 12-h water immersion, a positive trend appeared to be related to the protein/energy (P:E). It is concluded that fronds of P. columbina resulted in the best diet for weaning H. rufescens under horizontal water flow systems, even if apparently the water stability of the formulated diet had a negative impact on abalone performance, particularly due to a poor nutrient retention capacity. Therefore, formulated diets should be improved before being recommended for weaning red abalone.