Genome‐Wide Identification of MicroRNAs Responsive to High Temperature in Rice (Oryza sativa) by High‐Throughput Deep Sequencing

MicroRNAs (miRNAs) are known to play important roles in plant growth and stress response. Heat stress is a severe abiotic stresses by adversely affecting plant growth and yield. To identify heat‐responsive miRNAs at the genome‐wide level in rice (Oryza sativa), we constructed two small RNA libraries from young panicles treated or not with heat conditions. Ion torrent sequencing of the two libraries identified 294 known miRNAs and 539 novel miRNAs. Differential expression analysis showed that 26 miRNAs were downregulated and 21 miRNAs were upregulated in response to heat stress. Among them, five heat‐responsive miRNAs, including miR162b, miR529a‐p5, PC‐5P‐62245‐9, miR171b and miR169n, were validated by quantitative real‐time polymerase chain reaction. A total of 44 target genes of the differentially expressed miRNAs were predicted. These target genes are most significantly overrepresented in the cell growth process. The results demonstrated that rice miRNAs play critical roles in the heat stress response. This study opens up a new avenue for understanding the regulatory mechanisms of miRNAs involvement in the heat stress response in rice.     

Limited effects of land use on soil dissolved organic matter chemistry as assessed by excitation–emission fluorescence spectroscopy and molecular weight fractionation

Dissolved organic matter (DOM) in soil solution represents a complex mixture of organic molecules and plays a central role in carbon and nitrogen cycling in plant–microbial–soil systems. We tested whether excitation–emission matrix (EEM) fluorescence spectroscopy can be used to characterize DOM and support previous findings that the majority of DOM is of high molecular weight (MW). EEM fluorescence spectroscopy was used in conjunction with MW fractionation to characterize DOM in soil solution from a grassland soil land management gradient in North Wales, UK. Data analysis suggested that three distinct fluorescence components could be separated and identified from the EEM data. These components were identified as being of humic‐like or fulvic‐like origin. Contrary to expectations, the majority of the fluorescence signal occurred in the small MW (<1 kDa) fraction, although differences between soils from the differently managed grasslands were more apparent in larger MW fractions. We conclude that following further characterization of the chemical composition of the fluorophores, EEM has potential as a sensitive technique for characterizing the small MW phenolic fraction of DOM in soils.     

Some Agronomic Strategies for Organic Quinoa (Chenopodium quinoa Willd.)

Quinoa is a potential new seed crop for protein feed and human consumption in Europe, with tolerance to a range of abiotic stresses. For this purpose the study was planned to analyse the effect of important agronomic strategies like nitrogen level, N application strategy, row spacing and harvest time on yield and quality of quinoa. The experiments took place in the field of the experimental station of the Faculty of Science, University of Copenhagen. Three levels of organic nitrogen from slurry was used (60, 120 and 180 kg N ha^?1), supplied either all at once at sowing, or split between sowing and beginning of the reproductive phase. The effect of row spacing and harvest time was studied by harvesting seeds at seed maturity, which occurred 2–3 weeks prior to the mechanical harvest by threshing, and a couple of months after. Yield increased significantly (P ≤ 0.05) with an application up to 180 kg N ha^?1, reaching 2200 kg ha^?1. Increasing N also caused a significantly increased seed weight (up to 3.3 mg) and protein content (up to 17 %). N level did not affect number and amount of weeds. Split application with part of the N applied at bud formation did not have a significant effect on yield. Delayed harvest had a negative influence on seed weight, whereas protein content was stable after harvesting even a month after seed maturity. A late harvest significantly reduced seed germination, being reduced by 50 % after a 2‐month delay. A conclusion from this study is that both yield and protein content of seed can be manipulated by N level and application strategy. Harvest time is important for securing a high seed quality measured as seed germination, seed weight and protein content. A fast germination of quinoa is an important characteristic demonstrating that the crop has good possibilities for being well‐established in the field when free from weeds at the time of sowing. The choice of row spacing is important and depends on weed control method. Weed control strategy should be developed based on modern precision tools.     

Morphological and Physiological Responses of Plantain (Plantago lanceolata) and Chicory (Cichorium intybus) to Water Stress and Defoliation Frequency

Plants are often subjected to periods of water stress. There are little data examining the effect of water stress on the forage species Plantago lanceolata and Cichorium intybus. In two pot experiments with P. lanceolata and C. intybus, morphological responses under optimum, dry, and very‐dry water treatments with weekly, fortnightly and 3‐weekly defoliation intervals and physiological responses under optimum and very‐dry water treatments were measured. A third experiment compared the rooting depths of P. lanceolata and C. intybus under field conditions. These findings suggest that both P. lanceolata and C. intybus can survive and continue to grow under water stress conditions with the main differences between the two species being attributable to morphological characteristics (root mass, taproot diameter and shoot mass fraction) rather than differences at a physiological level. Overall, the results suggest plantain may be more productive under moderate drought due to its greater shoot mass fraction, whereas chicory may be more productive and persistent under severe drought due to its greater root mass, taproot diameter and root depth under field conditions.     

基于关联度、主成分和聚类分析的西南区玉米新组合评价

对于玉米育种而言,新组合的科学评价至关重要。以西南区55个玉米新组合为研究材料,对其产量等15个农艺性状进行灰色关联度分析、主成分分析和聚类分析。结果表明:不同玉米新组合农艺性状与产量的关联度大小依次为单株粒重>穗粗>籽粒含水量>百粒重>空杆率>穗行数>出籽率>穗长>倒折率>行粒数>茎粗>株高>穗位高>秃尖长。以产量最高组合1703为理想品种,综合评价表现较优的组合有成单388、绵1308、川单1751和荣玉1756。通过主成分分析将14个性状降为9个主成分,可解释表型变异的91.11%。依据主成分综合评价模型,可将所有组合分为6类,其中,川单1751、青青711、恩1010、成单388、绵1308、青青733和1703表现最优。聚类分析结果则将所有材料分为5类,结果与主成分分析法得出的结论基本一致。结果表明,玉米新组合绵1308、成单388、川单1751和1703表现最优。     

Can additional N fertiliser ameliorate the elevated CO2‐induced depression in grain and tissue N concentrations of wheat on a high soil N background?

Elevated CO₂ stimulates crop yields but leads to lower tissue and grain nitrogen concentrations [N], raising concerns about grain quality in cereals. To test whether N fertiliser application above optimum growth requirements can alleviate the decline in tissue [N], wheat was grown in a Free Air CO₂ Enrichment facility in a low‐rainfall cropping system on high soil N. Crops were grown with and without addition of 50–60 kg N/ha in 12 growing environments created by supplemental irrigation and two sowing dates over 3 years. Elevated CO₂ increased yield and biomass (on average by 25%) and decreased biomass [N] (3%–9%) and grain [N] (5%). Nitrogen uptake was greater (20%) in crops grown under elevated CO₂. Additional N supply had no effect on yield and biomass, confirming high soil N. Small increases in [N] with N addition were insufficient to offset declines in grain [N] under elevated CO₂. Instead, N application increased the [N] in straw and decreased N harvest index. The results suggest that conventional addition of N does not mitigate grain [N] depression under elevated CO₂, and lend support to hypotheses that link decreases in crop [N] with biochemical limitations rather than N supply.     

Tangential Chains of Neuroblasts in the Subpial Layer of the Adult Rabbit Cerebellum

Veterinary Research Communications -