Five methods to interpret field measurements of energy fluxes over a micro-sprinkler-irrigated mango orchard

Energy balance measurements were carried out in a mango orchard during two growing seasons in the semi-arid region of Brazil. The actual evapotranspiration (ET) was acquired by eddy correlation (EC) and Bowen ratio energy balance (BR) techniques. The daily energy balance closure in the EC measurements showed an average gap of 12%, with a root mean square error (RMSE) of 1.7 MJ m⁻² d⁻¹. Three different correction procedures were tested for closing the energy balance from the EC system: (1) the surface energy balance residual method (RES), (2) the Bowen ratio determined from the EC fluxes, the combination approach (EC_BR), and (3) a new regression energy balance closure technique (REG). All closing energy balance methods presented good correlation with the direct EC measurements, but the trends were not similar. The latent heat fluxes estimated by the BR method—λE _BR—were higher than those from the direct EC measurements—λE _EC. When using the RES method, the half-hour λE _EC measurements represented around 88% of the λE _RES values, as the uncertainties of net radiation—R _n—and soil heat fluxes—G—are propagated into the RES method. The latent heat flux derived from the combination approach—λE _{EC_BR}—also brings these uncertainties, being the agreements comparable with those for RES method. It was therefore concluded that a single correction method for EC measurements considering only the latent and sensible heat fluxes does not exist. A new way to solve the lack of energy balance closure from EC techniques was tested by means of a curve fitting, the REG method. Considering the REG corrections applied to the energy balance components involving all periods of the day and the average conditions of the two growing seasons, half-hour values of λE _EC were overmeasured by 18%, H _EC was undermeasured by 17%, and G values required a correction of 466%. The REG method appeared promising because it considers different weights for all energy balance components in the optimization process. Taking the REG results for the drier second growing season as a reference, it was concluded that seasonal ET values by the other methods in mango orchard ranged from 7 to 28% higher, showing that turbulent flux measurements lack accuracy for executing on-farm water-saving programmes and calibrating transient soil water flow models.     

Evaluating the potential of wine-making residues and corn cobs as support materials for cell immobilization for ethanol production

Three wine-making residues (grape seeds, skins and stems), and corn cobs were evaluated as support material for immobilization of Saccharomyces cerevisiae and the ethanol production by the immobilized cells was assessed. The main objective of this study was to find an abundant and low cost material suitable for the cells immobilization and able to be used in a next step of wine production by immobilized yeast cells. The four natural materials were used as support in two different forms: untreated, and treated by a sequence of acid and basic reactions. Untreated grape skin and corn cobs provided the highest cell immobilization results (25.1 and 22.2 mg cells/g support, respectively). The maximum ethanol production yield (about 0.50 g/g) was also obtained when the cells were immobilized in these untreated materials. It was also found that the support materials released nutrients to the medium, which favored the yeast development and the ethanol production. The use of immobilized cells systems under agitated conditions gave ethanol yields similar to those obtained by the static fermentations, but the immobilized cell concentration was significantly lower. In brief, static fermentation with cells immobilized on grape skins or corn cobs appear to be an interesting alternative for use on wine-making. The use of grape skins, particularly, which is a by-product of the wine elaboration, could be of larger interest to obtain an integrated wine production process with by-product reuse.     

Differential expression of molecular rust resistance components have distinctive profiles in <Emphasis Type="Italic">Coffea arabica</Emphasis> - <Emphasis Type="Italic">Hemileia vastatrix</Emphasis> interactions

Countering the economic hurdle caused by coffee leaf rust disease is most appealing at this time as it has posed a major threat to coffee production around the world. Establishing differential expression profiles at different times following pathogen invasion in both innate and acquired immunities unlocks the molecular components of resistance and susceptibility. Suppression subtractive hybridization (SSH) was used to identify genes differentially over-expressed and repressed during incompatible and compatible interactions between Coffea arabica and Hemileia vastatrix. From 433 clones of expressed sequence tags (ESTs) sequenced, 352 were annotated and categorized of which the proportion of genes expressed during compatible interaction were relatively smaller. The result showed upregulation and downregulation of various genes at 12 and 24 h after pathogen inoculation in both interactions. The use of four different databases in searching for gene homology resulted in different number of similar sequences. BLASTx against EMBL-EBI (European Molecular Biology Laboratory-European Bioinformatics Institute) database being with the maximum (100%) hits for all the annotated sequences. RT-qPCR analysis of seven resistance-signaling genes showed similar expression patterns for most of the genes in both interactions, indicating these genes are involved in basal (non-specific) defense during which immune reactions are similar. Using SSH, we identified different types of resistance related genes that could be used for further studies towards resistant cultivar development. The potential role of some of the resistance related proteins found were also discussed.     

Net mineral requirements for growth of Saanen goat kids in early life are similar among genders

The current mineral requirements for growing goat kids are based on sheep and cattle studies without differentiating between the stages of development or gender. The aims of this study were to determine the net requirements for growth of Ca, P, Mg, Na and K of Saanen goat kids during the initial stages of growth and to analyse the effect of gender on the net requirements for growth of these macrominerals. Eighteen female, 19 intact male and 10 castrated male Saanen goat kids were studied. The kids were selected applying a completely randomized design and slaughtered when their body weight (BW) reached approximately 5, 10 and 15 kg to determine the mineral requirements for growth at these stages. The net mineral requirements for growth were similar among genders. The goat kids had slightly increased net requirements of Ca, P and Mg for growth with increasing BW from 5 to 15 kg. The net requirements for growth of Ca, P, Mg, Na and K ranged from 9.61 to 9.67 g/kg of BW gain, 7.14 to 7.56 g/kg of BW gain, 0.34 to 0.37 g/kg of BW gain, 1.26 to 1.13 g/kg of BW gain, 1.88 to 1.82 g/kg of BW gain as the animals grew from 5 to 15 kg respectively. In conclusion, when formulating diets for Saanen goat kids in early growth stage mineral levels do not need to adjusted based on gender.     

Liberibacters associated with orange jasmine in Brazil: incidence in urban areas and relatedness to citrus liberibacters

Two surveys (2005/2006 and 2009) were conducted in the state of São Paulo, Brazil, to investigate the incidence of ‘Candidatus Liberibacter asiaticus’ and ‘Ca. L. americanus’, two liberibacters associated with citrus huanglongbing (HLB) disease and both transmitted by Diaphorina citri, in orange jasmine (Murraya exotica), a widespread ornamental tree in cities and villages. The graft‐transmissibility of the two species, and their DNA relatedness to citrus‐associated liberibacters, were also investigated. Quantitative PCR was applied to PCR‐positive orange jasmine and HLB‐positive citrus growing in backyards and orchards to assess their inoculum source potentials. Liberibacters were detected in 91 of 786 sampled orange jasmine plants in 10 of 76 sampled locations. PCR‐positive trees exhibited yellow shoots and/or dieback symptoms indistinguishable from those on PCR‐negative trees. ‘Candidatus Liberibacter americanus’ was more common in 2005/2006 (96·6%) and ‘Ca. L. asiaticus’ in 2009 (84·8%). rplJ nucleotide sequences were identical within all populations of either species. Graft transmission succeeded only in homologous host combinations, including ‘Ca. L. americanus’ (2/10) from/to orange jasmine and ‘Ca. L. americanus’ (5/18) and ‘Ca. L. asiaticus’ (5/9) from/to citrus. Symptoms were mild and developed less rapidly in orange jasmine than in citrus, probably as a result of lower liberibacter multiplication rates. Respective titres of ‘Ca. L. americanus’ and ‘Ca. L. asiaticus’ in orange jasmine averaged 4·3 and 3·0 log cells g^?1 tissue, compared with 5·5 and 7·3 in citrus. The results indicate that orange jasmine does not favour liberibacter multiplication as much as citrus. However, its importance in HLB epidemics should not be underestimated as it is a preferred host of D. citri and is not under any strict tree‐eradication programme or measures for insect control.     

Genetic diversity of the root‐knot nematode Meloidogyne enterolobii and development of a SCAR marker for this guava‐damaging species

The objectives of this work were to evaluate the genetic variability of Meloidogyne enterolobii by molecular markers, and develop species‐specific molecular markers for application in detection. Sixteen M. enterolobii isolates from different geographical regions (Brazil and other countries) and hosts were used in this study. The identification and purification of the populations were carried out based on isoenzyme phenotype. The DNA amplification of the intergenic region (IGS) of the rDNA and of the region between the cytochrome oxidase subunit II (COII) and 16S rRNA genes (mtDNA) produced specific fragments of the expected size for this nematode, i.e. 780 and 705 bp, respectively. Intraspecific variability among the isolates was evaluated with three different neutral molecular markers: AFLP, ISSR and RAPD. The results showed a low level of diversity among the isolates tested, indicating that M. enterolobii is a genetically homogeneous root‐knot nematode species. The RAPD method allowed the identification of a species‐specific RAPD fragment for M. enterolobii. This fragment was cloned and sequenced, and from the sequence obtained, a set of primers was designed and tested. The amplification of a 520‐bp‐long fragment occurred only for the 16 isolates of M. enterolobii and not for the 10 other Meloidogyne species tested. In addition, positive detection was achieved in a single individual female, egg‐mass and second stage juvenile of this nematode. This SCAR species‐specific marker for M. enterolobii represents a new molecular tool to be used in the detection of this nematode from field samples and as a routine diagnostic test for quarantine devices .     

Mechanically-applied wax matrix (SPLAT-GBM) for mating disruption of grape berry moth (Lepidoptera: Tortricidae)

An ATV-mounted mechanical applicator was designed to treat vineyards with SPLAT-GBM™ for mating disruption of grape berry moth, Paralobesia viteana (Lepidoptera: Tortricidae). SPLAT-GBM was applied to vineyards in 0.8 g drops at a density of 1544 or 3089 drops per hectare for a total of 1.3 or 2.5 kg per hectare. Trials were conducted in 2008 and 2009 in vineyards receiving grower-standard insecticide sprays for control of grape berry moth and other insect pests. In the first trial, SPLAT-GBM applied twice at 1.3 or 2.5 kg/ha caused a significant reduction in grape berry moth infestation at harvest on clusters at the border of the vineyards where infestation is highest, compared with the no-pheromone control, but three applications at 2.5 kg/ha did not result in lower infestation compared with both the control and other treatments. In the second trial, application of SPLAT-GBM 2.5 kg/ha in mid-June and late-July caused a significant reduction in grape berry moth infestation at harvest on clusters at the border of the vineyards. Application in early-May and late-June resulted in infestation that was similar to the other program, but not statistically different from the control. In both trials, there were no significant differences between any of the treatments of SPLAT-GBM and the control inside the vineyards where infestation is low. Among treatments of SPLAT-GBM, infestation was similar regardless of number, rate, or timing of the applications. This study shows that mechanical application of wax matrix drops to release pheromone is an effective method for control of grape berry moth using mating disruption.