Vertical nitrate fluxes in the oligotrophic ocean

The vertical flux of nitrate across the thermocline in the upper ocean imposes a rigorous constraint on the rate of export of organic carbon from the surface layer of the sea. This export is the primary means by which the oceans can serve as a sink for atmospheric carbon dioxide. For the oligotrophic open ocean regions, which make up more than 75% of the world's ocean, the rate of export is currently uncertain by an order of magnitude. For most of the year, the vertical flux of nitrate is that due to vertical turbulent transport of deep water rich in nitrate into the relatively impoverished surface layer. Direct measurements of rates of turbulent kinetic energy dissipation, coupled with highly resolved vertical profiles of nitrate and density in the oligotrophic eastern Atlantic showed that the rate of transport, averaged over 2 weeks, was 0.14 (0.002 to 0.89, 95% confidence interval) millimole of nitrate per square meter per day and was statistically no different from the integrated rate of nitrate uptake as measured by incorporation of (15)N-labeled nitrate. The stoichiometrically equivalent loss of carbon from the upper ocean, which is the relevant quantity for the carbon dioxide and climate question, is then fixed at 0.90 (0.01 to 5.70) millimole of carbon per square meter per day. These rates are much lower than recent estimates based on in situ changes in oxygen over annual scales; they are consistent with a biologically unproductive oligotrophic ocean.     

Molecular phylogenetics of mastodon and Tyrannosaurus rex

We report a molecular phylogeny for a nonavian dinosaur, extending our knowledge of trait evolution within nonavian dinosaurs into the macromolecular level of biological organization. Fragments of collagen alpha1(I) and alpha2(I) proteins extracted from fossil bones of Tyrannosaurus rex and Mammut americanum (mastodon) were analyzed with a variety of phylogenetic methods. Despite missing sequence data, the mastodon groups with elephant and the T. rex groups with birds, consistent with predictions based on genetic and morphological data for mastodon and on morphological data for T. rex. Our findings suggest that molecular data from long-extinct organisms may have the potential for resolving relationships at critical areas in the vertebrate evolutionary tree that have, so far, been phylogenetically intractable.     

Monitoring biosynthesis of wheat cell-wall phenylpropanoids in situ

Lignins and suberins are complex plant cell-wall macromolecules that are composed mainly of phenylpropanoid residues derived from L-phenylalanine. Lignins and suberins are considered to be covalently linked to carbohydrates and to lipids, respectively. The bonding of these important structural materials within cell walls has never been established. By feeding specifically labeled [(13)C] ferulic acid over extended durations to seedlings of Triticum aestivum L. and by using solid-state carbon-13 nuclear magnetic resonance techniques, the major resonances due to specific carbons in the propanoid side chains of these cell-wall polymers have been identified in situ. The signals were found to differ significantly from those of synthetic lignins, which have usually been considered to be good approximations of natural lignin structure.     

Conserved sequence and structural elements in the HIV-1 principal neutralizing determinant

The principal neutralizing determinant (PND) of human immunodeficiency virus HIV-1 is part of a disulfide bridged loop in the third variable region of the external envelope protein, gp120. Analysis of the amino acid sequences of this domain from 245 different HIV-1 isolates revealed that the PND is less variable than thought originally. Conservation to better than 80 percent of the amino acids in 9 out of 14 positions in the central portion of the PND and the occurrence of particular oligopeptide sequences in a majority of the isolates suggest that there are constraints on PND variability. One constraining influence may be the structural motif (beta strand--type II beta turn--beta strand--alpha helix) predicted for the consensus PND sequence by a neural network approach. Isolates with a PND similar to the commonly investigated human T cell lymphoma virus IIIB (HTLV-IIIB) and LAV-1 (BRU) strains were rare, and only 14 percent of sera from 86 randomly selected HIV-1 seropositive donors contained antibodies that recognized the PND of these virus isolates. In contrast, over 65 percent of these sera reacted with peptides containing more common PND sequences. These results suggest that HIV vaccine immunogens chosen because of their similarity to the consensus PND sequence and structure are likely to induce antibodies that neutralize a majority of HIV-1 isolates.     

Lymphocytic-choriomeningitis virus in hamster tumor: spread to hamsters and humans

A passage line of a spontaneous hamster fibrosarcoma is contaminated by the virus. of lymphocytic choriomeningitis. Tumors from animals receiving implants when newborn contain high titers of infectious lymphocytic-choriomeningitis virus and complement-fixing antigen, and hamsters receiving implants when weanlings develop high titers of complement-fixing antibody against lymphocytic-choriomeningitis virus. In contrast with the specific reactions of tumorous hamsters to the initiating virus in virus-induced tumors, the development of complement-fixing antibody to lymphocytic-choriomeningitis virus does not depend on the development of tumors. Infant hamsters bearing the tumor have a generalized subclinical infection and seem able to spread virus to other hamsters and to humans.     

Space perception in early infancy: perception within a common auditory-visual space?

Human infants aged I to 7 months were exposed to modifications of the normal spatial relationship between their mothers' face and voice. There was no evidence that such modifications were experienced by the infants as violations of a preexisting expectancy for face and voice to occupy the same spatial location.     

Stishovite at the cretaceous-tertiary boundary, raton, new Mexico

Stishovite, a dense phase of silica, has become widely accepted as an indicator of terrestrial impact events. Stishovite occurs at several impact structures but has not been found at volcanic sites. Solid-state silicon-29 magic-angle spinning nuclear magnetic resonance (silicon-29 MAS NMR) and X-ray diffraction of samples from the Cretaceous-Tertiary boundary layer at Raton, New Mexico, indicate that stishovite occurs in crystalline mineral grains. Stishovite was indicated by a single, sharp resonance with a chemical shift value of -191.3 ppm, characteristic of silicon in octahedral coordination, that disappeared after heating the sample at 850 degrees Celsius for 30 minutes. An X-ray diffraction pattern of HF residuals from the unheated sample displayed more than 120 peaks, most of which correspond to quartz, zircon, rutile, and anatase. Eight unambiguous weak to moderate reflections could be ascribed to d-spacings characteristic of stishovite.