On-farm evaluation of three different hatchery sources of Pacific white shrimp (Litopenaeus vannamei) cultured in on-levee tanks in low-salinity waters of west Alabama

ABSTRACT

Shrimp farmers in Alabama who produce the Pacific white shrimp, Litopenaeus vannamei, have recently reported abnormally low survival at harvest. Farmers have hypothesized that this phenomenon may be due to disease, toxic algae, shrimp source, or reduced shrimp robustness in later stages of production. To compare performance of shrimp from different sources, postlarvae were obtained from three different hatcheries and stocked on the same day in on-levee tank systems (TS) on two farms (Farm 1-TS; Farm 2-TS1; Farm 2-TS2). Following 104 days of culture on Farm 2-TS1 and Farm 2-TS2, there were no differences in survival (72.8%–91.2%) or final weight (19.8–24.6 g). At Farm 1-TS following 107 days of culture, there were differences in survival from shrimp sourced from one hatchery (40.5%) compared to the other two hatcheries (61.0%–69.8%). Results demonstrated acceptable growth performance and survival from all hatchery sources.     

Endotoxin Structures in the Psychrophiles Psychromonas marina and Psychrobacter cryohalolentis Contain Distinctive Acyl Features

Lipid A is the essential component of endotoxin (Gram-negative lipopolysaccharide), a potent immunostimulatory compound. As the outer surface of the outer membrane, the details of lipid A structure are crucial not only to bacterial pathogenesis but also to membrane integrity. This work characterizes the structure of lipid A in two psychrophiles, Psychromonas marina and Psychrobacter cryohalolentis, and also two mesophiles to which they are related using MALDI-TOF MS and fatty acid methyl ester (FAME) GC-MS. P. marina lipid A is strikingly similar to that of Escherichia coli in organization and total acyl size, but incorporates an unusual doubly unsaturated tetradecadienoyl acyl residue. P. cryohalolentis also shows structural organization similar to a closely related mesophile, Acinetobacter baumannii, however it has generally shorter acyl constituents and shows many acyl variants differing by single methylene (-CH₂-) units, a characteristic it shares with the one previously reported psychrotolerant lipid A structure. This work is the first detailed structural characterization of lipid A from an obligate psychrophile and the second from a psychrotolerant species. It reveals distinctive structural features of psychrophilic lipid A in comparison to that of related mesophiles which suggest constitutive adaptations to maintain outer membrane fluidity in cold environments.     

Bayesian methods for predicting LAI and soil water content

LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation.     

Leaf physiology and morphology of Castanea dentata (Marsh.) Borkh., Castanea mollissima Blume,and three backcross breeding generations planted in the southern Appalachians,USA

Backcross breeding programs have been used to transfer disease resistance and other traits from one forest tree species to another in order to meet restoration objectives. Evaluating the field performance of such material is critical for determining the success of breeding programs. In eastern North America, The American Chestnut Foundation has a backcross breeding program that uses Chinese chestnut (Castanea mollissima Blume) to introduce resistance of the fungal pathogen chestnut blight [Cryphonectria parasitica (Murr.) Barr.] to the native American chestnut [Castanea dentata (Marsh.) Borkh.]. We compared physiological and morphological characteristics among seedlings of American chestnut, Chinese chestnut, and BC₁F₃, BC₂F₃, and BC₃F₃ hybrid chestnuts during their fourth growing season after field-planting. American chestnut and the BC₃F₃ breeding generation displayed photosynthetic light-response curves that were similar to each other but different from Chinese chestnut. Rates of photosynthesis were higher for American chestnut and the BC₃F₃ breeding generation when compared to Chinese chestnut for light levels ≥800 μmol m^?2 s^?1 photosynthetic photon flux density and for maximum photosynthetic capacity. Leaf morphology variables were not different between American chestnut and any of the breeding generations, but leaf area (on a per leaf basis) of Chinese chestnut was lower than that of any other chestnut type. Our results suggest that backcross breeding can be used to transfer desirable traits for restoration of native species threatened by non-native pathogens.     

The effect of piscidin antimicrobial peptides on the formation of Gram-negative bacterial biofilms

Fish-derived antimicrobial peptides are an important part of the innate immune system due to their potent antimicrobial properties. Piscidins are a class of antimicrobial peptides first described in hybrid striped bass (Morone chrysops x Morone saxatilis) but have also been identified in many other fish species. Previous work demonstrated the broad antimicrobial activity of piscidins against Gram-negative and Gram-positive bacterial species. This study sought to determine the extent to which class I (striped bass piscidin 1, white bass piscidin 1 and striped bass/white bass piscidin 3) and class II (striped bass piscidin 4 and white bass piscidin 5) piscidins inhibit biofilm formation of different Gram-negative bacteria. In general, the class I and II piscidins demonstrate potent activity against Escherichia coli and Flavobacterium columnare biofilms. The class II piscidins showed more activity against E. coli and F. columnare isolates than did the class I piscidins. The piscidins in general were much less effective against inhibiting Aeromonas hydrophila and A. veronii biofilm growth. Only the class I piscidins showed significant growth inhibition among the Aeromonas spp. examined.     

Evidence for long‐term spatial displacement of breeding and pupping harbour seals by shellfish aquaculture over three decades

• 1. Shellfish mariculture is increasing worldwide and often occurs adjacent to marine mammal breeding and feeding habitat. To better understand breeding pinniped vulnerability to potential shellfish mariculture disturbance and displacement effects in a US National Park, potential mechanisms were explored that may affect the proportion of harbour seals (Phoca vitulina) selecting high quality haul‐out sites near shellfish aquaculture within a large colony, and overall seal utilization of that colony in relation to other regional colonies.
• 2. Seal haul‐out sites isolated from the mainland (no predator access) had higher pup:adult ratios, indicating they are generally more important for pupping. Short‐term human disturbance did not have a significant effect on spatial use, but rather spatial use was pre‐determined by general sandbar isolation. Using multiple competing hypothesis and an information‐theoretic approach, it was found that within the estuary, after removing effects of El Niño, the proportion of seals (total seals and pups only) hauled out near mariculture sites was 8 ± 2% lower during years of higher oyster harvest. Annual oyster harvest was used as a measure of aquaculture activity that could result in direct disturbance or indirect displacement of harbour seals.
• 3. At the regional scale, oyster harvest, seal counts at a nearby colony, and loss of a major haul‐out site within the estuary, best explained pup and total seal use compared with the region. Regional population size, short‐term human disturbance rate, and other factors were not important. Concurrent with higher oyster harvest, the proportion of regional seals using the estuary declined by 7 ± 2% for seal pups (–65 ± 18 total pups), and 5 ± 2% for total counts ( ? 192 ± 58 total seals). These findings (both within the estuary and at the regional scale) were essentially identical whether modelling oyster harvest as either a continuous or categorical (low/high) variable and when using either frequentist or Bayesian statistical analyses.
• 4. Marine reserves set aside for wildlife may be less effective when the highest quality breeding and pupping sites are adjacent to regular aquaculture activities. These effects may not be detectable until additional natural variation lowers the quality of nearby habitats. Published in 2011. This article is a US Government work and is in the public domain in the USA.

     

The importance of gallery forests in the tropical lowlands of Costa Rica for understorey forest birds

Rivers and streams lined by narrow forest strips are common in the lowland countryside of south-western Costa Rica. We studied the importance of these gallery forests for understorey birds, especially forest species. Using mist-nets, we captured 1110 birds belonging to 90 species between June and September 2007 at 16 sites spread equally over four habitat types: forest interior, forest margin, gallery forest connected to closed forest, and isolated gallery forest. Though isolated gallery forests had the greatest number of expected species in total, they supported the lowest number of forest-specialist species, lower even than connected gallery forests. Granivorous birds showed an increase from forest to isolated gallery forest, all other feeding guilds however showed no change. The studied habitats differed from each other in their faunal composition. Assemblages of three species groups categorised by their habitat preferences (forest specialists, forest generalists, non-forest species) showed nested distribution patterns across the four habitats. There was no significant difference in the proportion of birds with brood patches or of recaptures across the studied habitat types, leading to the assumption that birds not only use gallery forests for movement and foraging but also for reproduction. Though of limited conservation value for most forest understorey birds, at least for a small fraction of forest species gallery forests constitute an important secondary habitat. More significantly, they can form corridors or stepping stones that allow movements within the matrix of human-dominated habitats, and represent an important landscape component benefiting total bird species richness in the Costa Rican countryside.     

Mechanical Evaluation of the Equine Laryngoplasty

Objectives: Mechanical evaluation of the equine laryngoplasty. Study Design: Experimental. Animal Population: Cadaveric cricoid (n=36) and arytenoid (46) cartilages. Methods: Arytenoid and cricoid cartilage specimens were embedded for testing. Suture material (2 Ethilon^®, 5 Ethibond^®, or 5 Fiberwire^®) was inserted simulating laryngoplasty procedures. Constructs were evaluated in single or cyclic loading. Single cycle tests recorded load at failure and stiffness. Cyclical tests recorded displacement after 10,000 cycles. ANOVA and t‐tests were used (significance P<.05). Results: The arytenoid Ethibond^® (241.10±47.67 N) constructs were stronger in single cycle than Ethilon^® (133.85±27.89 N) and Fiberwire^® (142.67±32.40 N). The cricoid Ethibond^® (220.39±49.11 N) constructs were stronger than Ethilon^® (171.93±21.19). The stiffness of Ethilon^® constructs was lower in both the arytenoid and cricoid compared with Ethibond^® and Fiberwire^®. The arytenoids failed at a lower load than the cricoids for Ethilon^® and Fiberwire^® but not Ethibond^® constructs. In cyclic testing complete failure of either cartilage did not occur. Arytenoid Ethibond^® constructs (0.43±0.21 mm) had less distraction than Ethilon^® (0.92±0.41 mm) and a trend for less compared with Fiberwire^® (0.83±0.43 mm; P=.0513). Cricoid Ethibond^® constructs (0.45±0.18 mm) had less distraction compared with Ethilon^® (1.04±0.30 mm) and Fiberwire^® (0.97±0.45 mm). Conclusions: Ethibond^® was superior to Ethilon^® and Fiberwire^® constructs in vitro. Clinical Relevance: Abduction loss after laryngoplasty is a common complication. The results of this study suggest that the use of Ethibond^® should minimize abduction loss after surgery relative to the other materials tested.     

Assessment of yocoboue wild oil palm (Elaeis guineensis Jacq.) from Côte d'Ivoire

Following a survey involving wild oil palm groves in Côte d’Ivoire as a whole in 1968, 17 parents were chosen at Yocoboué (southernCôte d’Ivoire). Agronomic performance of the 17 parents was assessed through Deli × Yocoboué hybrids in 3 trials grown at La Mé (Côte d’Ivoire), Mondoni and La Dibamba (Cameroon).When compared to the Deli × La Mé progenies used as controls, the Deli × Yocoboué hybrids produced 91% for total bunch weight and86% for oil yields. However, the genetic variability within the Deli × Yocoboué progenies allows to select individual progenies as productive as the Deli × La Mé controls, for breeding purposes. A study of major agronomic traits led to the choice of parent YO 11 T , which combines the largest number of favourable traits. On average, Deli × Yocobouéprogenies have slower vertical growth and are susceptible to Fusarium wilt, except 2 parents (YO 3 T and YO 9 T), which seem to be resistant.     

The effect of introgressions of wheat D-genome chromosomes into 'Presto' triticale

Hexaploid triticale (X Triticosecale Wittmack) (2n= 6x= 42, AABBRR) and wheat (Triticum aestivum L.) (2n= 6x= 42, AABBDD) differ in their R and D-genomes. This produces differences in both agronomic and end-use quality characteristics. Our objective was to determine how introgressions of individual chromosomes from the D-genome of wheat affect these characteristics of a winter triticale 'Presto'. We studied the effects of 18 D-genome chromosome substitution lines, 15 sib-lines as controls, and five check cultivars at Lincoln, NE in 1996, using a randomized complete block design with two replications. The experiment was repeated at Lincoln and Mead, NE in 1997 and 1998 with 15 substitution lines that survived the first winter in Lincoln, along with their 12 control sibs and five check cultivars. Few D-genome chromosomes had positive effects. Chromosomes 2D, 4D, and 6D significantly reduced plant height when substituted for 2R, 4B, and 6R, respectively. No grain yield increases were associated with any of the D-genome chromosomes tested, but three substitutions decreased the grain yield. Depending on the allele of the hardness gene present, chromosome 5D increased or decreased kernel hardness when substituted for 5R or 5A, respectively. Introgressions of chromosomes 1D and 6D improved end-use quality characteristics of Presto. These results suggest that apart from beneficial effects of individual loci located on the D-genome chromosomes, no major benefit can be expected from D-genome chromosome substitutions.