Simulation of statistical characteristics of gap distribution in forest stands

An estimate of the required amount of LAI-2000 or digital hemispheric image measurements to ensure the desired accuracy of the leaf area index value derived from optical analyser measurements by inversion of gap fraction data is given. The estimate is based on a theoretical model of the second order statistics of gap occurrence in forest canopies. The main attention is paid to gap fractions averaged over the angular rings similar to the LAI-2000 instrument. Nilson's (1999) forest gap fraction model is first extended to simulate the bidirectional gap fraction and next the approximate equations for the standard deviation of gap fraction, correlation matrix of gap readings in different LAI-2000 angular rings, standard deviation of the LAI value as determined by the inversion of gap fraction data are derived. The results of simulation are compared with those obtained by LAI-2000 instrument and digital hemispheric photographs in three mature forests from Järvselja, Estonia. The comparison shows an acceptable agreement between the simulated and measured second order statistical characteristics. The distance from the observation height to the crowns and crown dimensions appear to be important in determining the magnitude of variance. When the LAI-2000 instrument is used together with a view-cap, the angular size of the view-cap has an effect on the second order statistics and on the value of apparent clumping index. A computer program has been written to calculate the second-order gap statistics.     

Oceanic Rossby waves acting as a "hay rake" for ecosystem floating by-products

Recent satellite observations of Rossby waves and chlorophyll anomalies propagating in subtropical gyres have suggested that wave-induced upwelling could stimulate photosynthesis. Instead, we show that chlorophyll maxima are located in abnormally warm water, in Rossby wave-induced convergences. This excludes inputs of nutrients from deeper water. We argue that the sea color anomalies are not caused by chlorophyll but by floating particles evolved from the ecosystem and accumulated by Rossby waves, acting as "marine hay rakes," in convergence zones. Such processes may be determinant for the distribution of living organisms in oligotrophic areas.     

Preceramic adoption of peanut, squash, and cotton in northern Peru

The early development of agriculture in the New World has been assumed to involve early farming in settlements in the Andes, but the record has been sparse. Peanut (Arachis sp.), squash (Cucurbita moschata), and cotton (Gossypium barbadense) macrofossils were excavated from archaeological sites on the western slopes of the northern Peruvian Andes. Direct radiocarbon dating indicated that these plants grew between 9240 and 5500 (14)C years before the present. These and other plants were recovered from multiple locations in a tropical dry forest valley, including household clusters, permanent architectural structures, garden plots, irrigation canals, hoes, and storage structures. These data provide evidence for early use of peanut and squash in the human diet and of cotton for industrial purposes and indicate that horticultural economies in parts of the Andes took root by about 10,000 years ago.     

Transmission of small ruminant lentiviruses

Small ruminant lentiviruses (SRLV) are classical slow retroviruses causing chronic inflammatory disease in a variety of target organs. The routes of transmission have been investigated and a large body of evidence has accumulated over many years. The main routes are through ingestion of infected colostrum and/or milk, or through inhalation of respiratory secretions. However, many studies also provide evidence that intrauterine infection may occur, though the extent and significance of this route is controversial. Embryos treated to IETS standards appear to pose very little risk of infection. SRLV have been detected in semen suggesting a potential source of transmission. However, such transmission has not been demonstrated to date. The application of control measures based on this information allows more efficient strategies to be developed which will reduce the rate of transmission.     

Characterizing the Saltol Quantitative Trait Locus for Salinity Tolerance in Rice

This study characterized Pokkali-derived quantitative trait loci (QTLs) for seedling stage salinity tolerance in preparation for use in marker-assisted breeding. An analysis of 100 SSR markers on 140 IR29/Pokkali recombinant inbred lines (RILs) confirmed the location of the Saltol QTL on chromosome 1 and identified additional QTLs associated with tolerance. Analysis of a series of backcross lines and near-isogenic lines (NILs) developed to better characterize the effect of the Saltol locus revealed that Saltol mainly acted to control shoot Na⁺/K⁺ homeostasis. Multiple QTLs were required to acquire a high level of tolerance. Unexpectedly, multiple Pokkali alleles at Saltol were detected within the RIL population and between backcross lines, and representative lines were compared with seven Pokkali accessions to better characterize this allelic variation. Thus, while the Saltol locus presents a complex scenario, it provides an opportunity for marker-assisted backcrossing to improve salt tolerance of popular varieties followed by targeting multiple loci through QTL pyramiding for areas with higher salt stress.     

Lignin content and briquette quality of different fibre hemp plant types and energy sunflower

Fibre hemp and energy sunflower are potential energy crops for production of solid biomass as renewable energy. The current study estimated (i) the lignin content of fibre hemp and energy sunflower plants grown on different nitrogen treatments and (ii) the quality of the briquettes made from different plant types of fibre hemp (i.e. monoecious and dioecious), energy sunflower and the combination of fibre hemp and energy sunflower. The monoecious and dioecious fibre hemp cultivars (Chameleon, Finola and Santhica-27, USO-31, respectively) and the energy sunflower cultivar Wielkopolski were grown in the experimental field in 2008-2010 on Stagnic Luvisol soil. The plants were grown on N treatments of N0, mineral nitrogen (100 kg N ha⁻¹), cattle slurry (100 kg N ha⁻¹), sewage sludge (100 kg N ha⁻¹) and vetch (100 kg N ha⁻¹). Calorific values (16.6-17.4 MJ kg⁻¹) of briquettes pressed from different materials did not differ significantly and had relatively low sulphur (<0.05%) and chlorine content (0.03-0.37%). Briquettes with higher compactness were made from the sunflower and the dioecious hemp. Dioecious hemp had significantly higher lignin content. The dioecious hemp needs lower GDD values for maturating, its stems lignin content was higher than of monoecious hemp by harvest time and therefore this plant type is more suitable for briquetting in Nordic climatic conditions. Comparison of the different N treatments indicated that application of sewage sludge decreased the emergence and density of the fibre hemp plants and the lignin content per kg of DM.     

Key issues and challenges in whole wheat flour milling and storage

Whole wheat flour is increasingly popular as research continues to reveal the benefits of whole grains and the food industry offers more whole grain options for consumers. The purpose of this review is to address milling and shelf-life issues that are unique to whole wheat flour. No standard methods are available for whole wheat flour milling, resulting in very different bran particle sizes. Literature suggests that moderate bran particle size is the best for bread production, while small particle size is better for non-gluten applications. Shelf-life of whole wheat flour is shorter compared to white flour due to the presence of lipids and lipid-degrading enzymes. Lipolytic degradation leads to reduction in functionality, palatability and nutritional properties. Strategies to stabilize whole wheat flour have focused on controlling lipolytic enzyme activity and have marginally succeeded.     

Economics of intercropping loblolly pine and switchgrass for bioenergy markets in the southeastern United States

The main objective of this study was to assess the economics of alley cropping of loblolly pine (Pinus taeda L.) and switchgrass (Panicum virgatum) in the southern United States. Assuming a price range of switchgrass between $15 and $50?Mg^?1 and yield of 12?Mg?ha^?1 year^?1, we investigated the effect of switchgrass production on the optimal forest management for loblolly pine stands under different stumpage prices. We considered the following potential scenarios: no competition between species for resources; reduced loblolly pine productivity due to competition with switchgrass; and reduced productivity of both species due to competition for nutrients, water and light. Findings also suggested that the optimal system would depend on the competitive interactions between switchgrass and loblolly pine crops, and the expected prices for each crop. Loblolly pine monoculture would be the most profitable option for landowners compared to intercropping systems with switchgrass below $30?Mg^?1. However, when switchgrass prices are ??$30?Mg^?1, landowners would be financially better off adopting intercropping if competitive interaction between crops were minimal. In order to realize higher economic returns for intercropping system, forest landowners must make some efforts in order to diminish the decline of productivity.     

Role of inbreeding depression,non‐inbred dominance deviations and random year‐season effect in genetic trends for prolificacy in closed rabbit lines

In closed rabbit lines selected for prolificacy at the Polytechnic University of Valencia, genetic responses are predicted using BLUP. With a standard additive BLUP model and year‐season (YS) effects fitted as fixed, genetic trends were overestimated compared to responses estimated using control populations obtained from frozen embryos. In these lines, there is a confounding between genetic trend, YS effects and inbreeding, and the role of dominance is uncertain. This is a common situation in data from reproductively closed selection lines. This paper fits different genetic evaluation models to data of these lines, aiming to identify the source of these biases: dominance, inbreeding depression and/or an ill‐conditioned model due to the strong collinearity between YS, inbreeding and genetic trend. The study involved three maternal lines (A, V and H) and analysed two traits, total born (TB) and the number of kits at weaning (NW). Models fitting YS effect as fixed or random were implemented, in addition to additive genetic, permanent environment effects and non‐inbred dominance deviations effects. When YS was fitted as a fixed effect, the genetic trends were overestimated compared to control populations, inbreeding had an apparent positive effect on litter size and the environmental trends were negative. When YS was fitted as random, the genetic trends were compatible with control populations results, inbreeding had a negative effect (lower prolificacy) and environmental trends were flat. The model fitting random YS, inbreeding and non‐inbred dominance deviations yielded the following ratios of additive and dominance variances to total variance for NW: 0.06 and 0.01 for line A, 0.06 and 0.00 for line V and 0.01 and 0.08 for line H. Except for line H, dominance deviations seem to be of low relevance. When it is confounded with inbreeding as in these lines, fitting YS effect as random allows correct estimation of genetic trends.