Biodiversity is associated with indicators of soil ecosystem functions over a landscape gradient of agricultural intensification

Agricultural intensification has led to dramatic losses in biodiversity over the past several decades. Many studies have shown the effects of intensification on vegetation or soil communities at field or local scales. However, the functional significance of biodiversity may only appear at larger spatial and temporal scales, due to exchanges among local ecosystems throughout a landscape. To examine how patterns of biodiversity loss are reflected at larger spatial scales, plant and soil biodiversity and associated indicators of ecosystem functions were assessed in riparian areas over a 150 km² agricultural landscape in the Sacramento Valley of California. Publicly-available GIS data were first used to classify and select sites over the range of soils, topography and plant community types. Representative sites from the landscape were sampled for soil physiochemical properties, as well as microbial, nematode, and plant communities. Higher agricultural intensification, based on field and landscape indices, was negatively correlated with richness and diversity of plant and soil taxa, and was related to indicators of ecosystem functions, such as increased soil nitrate and phosphorus loading, decreased riparian health ratings, and lower soil carbon, soil microbial biomass and soil food web structure. Both field- and landscape-scale factors played important roles in the measured losses. The study area was composed of a wide array of soils, vegetation, and land management, indicating that the observed trends transcended site-specific conditions.     

Structural and thermal characterization of wheat straw pretreated with aqueous ammonia soaking

Production of renewable fuels and chemicals from lignocellulosic feedstocks requires an efficient pretreatment technology to allow ready access of polysaccharides for cellulolytic enzymes during saccharification. The effect of pretreatment on wheat straw through a low-temperature and low-pressure soaking aqueous ammonia (SAA) process was investigated in this study using Fourier transform infrared (FTIR), pyrolysis-gas chromatography/mass spectroscopy (Py-GC/MS), solid and liquid state nuclear magnetic resonance (NMR), and thermogravimetry/differential thermogravimetry (TG/DTG) to demonstrate the changes in lignin, hemicellulose, and cellulose structure. After treatment of 60 mesh wheat straw particles for 60 h with 28-30% ammonium hydroxide (1:10 solid/liquid) at 50 °C, sugar recovery increased from 14% (untreated) to 67% (SAA treated). The FTIR study revealed a substantial decrease in absorbance of lignin peaks. Solid and liquid state NMR showed minimal lignin structural changes with significant compositional changes. Activation energy of control and pretreated wheat straw was calculated according to the Friedman and ASTM methods and found to be decreased for SAA-treated wheat straw, from 259 to 223 kJ/mol. The SAA treatment was shown to remove significant amounts of lignin without strongly affecting lignin functional groups or structure.     

Losing a staging area: Eastward redistribution of Afro-Eurasian ruffs is associated with deteriorating fuelling conditions along the western flyway

The fuelling performance of long-distance migrants at staging areas indicates local conditions and determines the viability of migration routes. Here we present a first case study where long-term fuelling performance was documented along two migration routes with differential population trends. Ruffs (Philomachus pugnax) are shorebirds of inland freshwater wetlands that migrate from the sub-Saharan wintering grounds, via Europe, to the northern Eurasian breeding grounds. Assessments from 2001 to 2008 of fuelling during northward migration at the major western and eastern staging site revealed that daily mass gain rates steeply declined across years in the grasslands for dairy production in Friesland, The Netherlands, and remained constant in the Pripyat floodplains in Belarus, 1500 km further east. Migrants in Friesland decreased from 2001 to 2010 by 66%, amounting to a loss of 21,000 individuals when counts were adjusted for length of stay as determined by resightings. In the same period numbers in Pripyat increased by 12,000. Ruffs individually ringed in Friesland were resighted in subsequent springs at increasingly eastern sites including Pripyat. Our results corroborate published evidence for an eastward redistribution of Arctic breeding ruffs and suggest that the decreasing fuelling rates in the westernmost staging area contribute to this redistribution. The shift implies that responses occur within a single generation. The hypothesis that the choice of route during northward migration may be driven by food availability can now be tested by creating greater areas of wet grasslands in Friesland. When local staging conditions improve we predict that ruffs will make the reverse shift.     

Evaluation of platelet function in dogs with cardiac disease using the PFA‐100 platelet function analyzer

Background: Cardiac disease has the potential to alter platelet function in dogs. Evaluation of platelet function using the PFA‐100 analyzer in dogs of multiple breeds and with a broad range of cardiac conditions would help clarify the effect of cardiac disease on platelets. Objectives: The objective of this study was to assess differences in closure time (CT) in dogs with cardiac disease associated with murmurs, when compared with that of healthy dogs. Methods: Thirty‐nine dogs with cardiac murmurs and turbulent blood flow as determined echocardiographically were included in the study. The dogs represented 23 different breeds. Dogs with murmurs were further divided into those with atrioventricular valvular insufficiency (n=23) and subaortic stenosis (n=9). Fifty‐eight clinically healthy dogs were used as controls. CTs were determined in duplicate on a PFA‐100 analyzer using collagen/ADP cartridges. Results: Compared with CTs in the control group (mean±SD, 57.6±5.9 seconds; median, 56.5 seconds; reference interval, 48.0–77.0 seconds), dogs with valvular insufficiency (mean±SD, 81.9±26.3 seconds; median, 78.0 seconds; range, 52.5–187 seconds), subaortic stenosis (71.4±16.5 seconds; median, 66.0 seconds; range, 51.5–95.0 seconds), and all dogs with murmurs combined (79.6±24.1 seconds; median, 74.0 seconds; range, 48.0–187 seconds) had significantly prolonged CTs (P<.01). Conclusions: The PFA‐100 analyzer is useful in detecting platelet function defects in dogs with cardiac murmurs, most notably those caused by mitral and/or tricuspid valvular insufficiency or subaortic stenosis. The form of turbulent blood flow does not appear to be an important factor in platelet hypofunction in these forms of cardiac disease.     

Induction and Transfer of Enhanced Biodegradation of the Herbicide Napropamide in Soils

In laboratory incubations, the times to 50% loss (DT₅₀) of a first application of napropamide were approximately 25, 45 and 75 days in soil incubated at 25, 15 and 5°C respectively. When treated for a second time, the DT₅₀ values were 4, 7 and 15 days at the same temperatures, irrespective of the temperature of the first incubation. This indicates that enhanced degradation of napropamide in soil can be both induced and expressed at low temperature. A mixed microbial culture able to degrade the herbicide to a single degradation product, identified by HPLC retention time as naphthoxypropionic acid, was obtained from a soil capable of rapid degradation. Addition of a sub-sample of this mixed culture to a previously untreated soil introduced rapid degrading ability. When small amounts of soil capable of rapid degradation were added to previously untreated soil, in both the laboratory and the field, the degradation rate of napropamide increased compared with that in unamended soils.     

Effects of cage netting colour and density on the skin pigmentation and stress response of Australian snapper Pagrus auratus (Bloch & Schneider, 1801)

The unnaturally dark pigmentation of cultured Australian snapper Pagrus auratus can be improved through dietary astaxanthin supplementation and by holding fish in tanks with a white background. The practical application of these laboratory‐based findings was examined with two experiments to establish if the advantages of transferring fish to light coloured tanks before harvest could be achieved on‐farm using white cages and to determine the effects of fish density on skin colour. For the first experiment, snapper (mean TL=29.7 cm) were transferred from a commercial snapper sea cage to black or white netted cages and fed diets supplemented with unesterified astaxanthin (supplied as Lucantin^® Pink, BASF) at 0 or 39 mg kg^?1 for 42 days. Skin colour was measured using the CIE (black–white), (green–red), (blue–yellow) colour scale. Snapper held in white netting cages became significantly lighter (higher ) than snapper held in black cages; however, values were not as high as previous laboratory‐based studies in which snapper were held in white plastic‐lined cages. Snapper fed astaxanthin displayed significantly greater and values, and total carotenoid concentrations after 42 days. In addition, total carotenoids were higher in fish from black than white cages. The second experiment was designed to investigate whether density reduced the improvements in skin colour achieved by holding fish in white coloured cages and whether cage colour affected stress. Snapper (mean weight=435 g) were acclimated to black cages and fed 39 mg kg^?1 astaxanthin for 44 days before transferring to black or white plastic‐lined cages at 14 (low), 29 (mid) or 45 (high) kg m^?3 for 7 days after which time skin colour, plasma cortisol and plasma glucose concentrations were measured. Skin lightness () was greater in snapper transferred to white plastic‐lined cages with the lightest coloured fish obtained from the lowest density after 7 days. Density had no effect on plasma cortisol or glucose levels after 7 days, although plasma cortisol was elevated in snapper from black cages. For improved skin colouration we recommend feeding unesterified astaxanthin at 39 mg kg^?1 for approximately 6 weeks and transferring snapper to white plastic‐lined cages or similar at low densities for short periods before harvest rather than producing fish in white netting sea cages subject to biofouling.