新疆库米什金矿土壤可培养细菌的多样性分析

[目的]了解新疆库米什一处金矿土壤可培养细菌的多样性及建立菌种资源库.[方法]采集库米什金矿土壤样品,采用两种不同培养基(LB,TSB)分离纯化细菌,对其进行形态观察(菌落及细胞)、生理测定、16SrDNA测序和系统进化分析.[结果]从两种培养基上总共得到50株细菌,根据基于16S rDNA的系统进化分析表明,50株菌分别属于3个大类群:厚壁菌门(Firmicutes ),放线菌门(Actinobacteria),γ-变形菌纲(γ-Proteobaeteria),12个属,30个分类单元.其中芽抱杆菌属(Bacillus)为优势细菌种群,占已测种群的63.3;.菌株L10-5与Bacillus foraminis (AJ717382)有96.463;的相似率,可能为潜在新种.[结论]库米什金矿土壤可培养细菌具有较高的多样性,存在潜在新菌种资源,值得进一步研究.     

Impact of Africa Regional Food Security Program on Nigerian Farmers： The Case of National Special Program for Food Security

This paper examined the impact of National Special Program for Food Security （NSPFS） on the beneficiaries through a qualitative measurement of the food security status of the beneficiaries. A food insecurity index was estimated to measure the well-being of the beneficiaries as affected by the impact of the program. Beneficiaries were classified into four categories： food secure （41%）, food insecure without hunger （46%）, food insecure with moderate hunger （11%）, and food insecure with severe hunger （2%）. Perceptions of beneficiaries were measured. In conclusion, the program has had a positive impact and enhanced food security among the Nigerian beneficiaries. It is not without its short comings which include delayed and untimely disbursement of funds and lack of output markets, irrigation facilities, production inputs and adequate training on technology know-how. The default rate and number of debtors remain high among beneficiaries. Efforts should be made to correct the short comings to improve the effectiveness of the program and justify the huge financial resources that have been committed.     

Molecular characterization of the wild relatives of safflower (Carthamus tinctorius L.) in Turkey as revealed by ISSRs

In the present study, we used 39 plant samples representing six Carthamus taxa collected from different regions of Turkey: 11 of C. dentatus, 5 of C. glaucus, 18 of C. lanatus, 3 of C. persicus, 1 of C. tenuis subsp. tenuis and 1 of C. tenuis subsp. gracillimus. On these samples, we screened nine ISSR markers for polymorphic products. We generated 151 polymorphic bands. In a dendrogram based on these ISSR bands, the first branch was C. tenuis subsp. gracillimus, then C. persicus formed the second group. The rest of the taxa were grouped in two clusters: the first included C. lanatus, C. tenuis subsp. tenuis and C. glaucus, and the second included C. dentatus. Within the first cluster, C. tenuis subsp. tenuis and C. glaucus grouped together and then united to C. lanatus. Representatives of the same taxa consistently clustered together. Also within species, the groupings were generally concordant with their geographical distributions.     

Assessment of genetic diversity among wheat (Triticum aestivum L.) cultivars from a range of localities across Pakistan using random amplified polymorphic DNA (RAPD) analysis

Genetic diversity among 20 wheat genotypes/cultivars from diverse locations of Pakistan was studied using random amplified polymorphic DNA (RAPD) analysis. A total of 445 DNA fragments were amplified with50 random decamer primers 64.38% of which were polymorphic. Genetic similarity matrix based on Nei & Li's (1979) index detected coefficients ranging from 75.60% to 92.74%. These coefficients were used to construct a dendrogram using unweighted pair group of arithmetic means (UPGMA). The wheat genotypes were clustered into one major group (A) and two small groups (B and C). The most distant genotype in the dendrogram was PARC-1 that was 75.60% to 84.94% genetically similar with the other genotypes and clustered with PARC-3 which formed a group distantly related with the other clusters. Moreover, most of the wheat genotypes developed from the same breeding centre clustered in one group. It has been clearly shown that most of the cultivars except PARC-1possessed narrow genetic background. The information would be helpful for future genome mapping programs as well as for the application of intellectual breeder rights in the country. The study will also work as indicator for wheat breeders to evolve varieties with diverse genetic background to achieve sustainability in wheat production in the country. This revised version was published online in August 2006 with corrections to the Cover Date.     

Antimycotic activities of selected plant flora,growing wild in Lebanon,against phytopathogenic fungi

Petroleum ether (PE) and methanolic extracts of nine wild plant species were tested in vitro for their antimycotic activity against eight phytopathogenic fungi. The efficacy of PE extracts against all pathogens tested was higher than that of methanolic extracts. Wild marjoram (Origanum syriacum) PE extract showed the highest and widest range of activity. It resulted in complete inhibition of mycelial growth of six of eight fungi tested and also gave nearly complete inhibition of spore germination of the six fungi included in the assay, namely, Botrytis cinerea, Alternaria solani, Penicillium sp., Cladosporium sp., Fusarium oxysporum f. sp. melonis, and Verticillium dahlia. The other plant extracts showed differential activities in the spore germination test, but none was highly active against mycelial growth. Inula viscosa and Mentha longifolia were highly effective (>88%) in spore germination tests against five of six fungi tested, whereas Centaurea pallescens, Cichorium intybus, Eryngium creticum, Salvia fruticosa, and Melia azedarach showed >95% inhibition of spore germination in at least two fungi. Foeniculum vulgare showed the least antimycotic activity. Fractionation followed by autobiography on TLC plates using Cladosporium sp. as a test organism showed that O. syriacum PE extracts contained three inhibition zones, and those of Inula viscosa and Cichorium intybus, two, whereas the PE extracts of the remaining plants showed each one inhibition zone. Some of the major compounds present in these inhibition zones were identified by GC-MS. The possibility for using these extracts, or their mixtures, to control plant diseases is discussed.     

Root traits of different crops under rainfed conditions in the High Barind Tract of Bangladesh

Root traits of six different crops grown on residual soil moisture in the post–rainy season in the High Barind Tract (HBT) of Bangladesh were investigated to better understand their adaptation to this moisture‐limited environment. Deep‐rooting chickpea is the currently favored rainfed crop grown after rainy‐season rice in the HBT, but it is necessary to identify alternative crops to chickpea in order to avoid buildup of pests and diseases. Averaged over 2 y, barley (1.72 Mg ha^–1) produced significantly more grain than chickpea (1.4 Mg ha^–1) which, in turn, yielded better than linseed (1.0 Mg ha^–1), wheat (0.93 Mg ha^–1), and mustard (0.77 Mg ha^–1). Lentil did not produce any grain at all. Grain yield for all crops increased as total root length increased above a threshold value of 0.05 to 0.1 km m^–2. In general, grain yield increased as the proportion of total root produced below 60 cm depth increased, although barley also had thin roots that could more effectively extract soil moisture. Expression of root traits varied considerably between seasons, which was attributable to the different rainfall patterns and bulk‐density characteristics of the soil profile in the 2 years of the study. Although favorable root traits, particularly rooting ability below 60 cm, are a prerequisite for acceptable yield levels of crops grown on residual soil moisture in the HBT, it is recognized that farmers' choice of a post‐rice crop will depend on its economic return or food‐security value.     

Effect of several production factors on two varieties of rapeseed in the central United States

Two varieties of winter rapeseed (Brassica napus) (Cobra and Liborius) were planted at Brownstown, IL to evaluate the effect of planting date, nitrogen (N) rate, N application timing, and tillage on grain yield and oil content of the grain, grain moisture, plant lodging, winter survival, and plant N content. Results indicated that planting rapeseed approximately one to two weeks prior to winter wheat in this region is preferable to planting earlier. Grain yield showed a significant linear increase with delayed planting date from 25 August to 24 September. Grain yield also increased quadratically with increasing N rate (with an optimum of about 250 kg N/ha) and increased (0.15 Mg/ha) due to splitting the N fertilizer into two even applications. An increase in grain yield was accompanied by an increase in grain moisture with Liborius (late maturing) having significantly greater grain moisture than Cobra. Winter survival increased linearly with delayed planting date but, was accompanied by a significant quadratic increase in plant lodging. Chisel, as compared to disk tillage, increased plant lodging slightly, but decreased winter survival slightly. Neither delayed planting, N rate, nor splitting of spring N affected oil content. Liborius produced significantly more oil than did Cobra.     

Temperature Differentially Affects Gene Expression in Antarctic Thraustochytrid Oblongichytrium sp. RT2316-13

Oblongichytrium RT2316-13 synthesizes lipids rich in eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA). The content of these fatty acids in the total lipids depended on growth temperature. Sequencing technology was used in this work to examine the thraustochytrid’s response to a decrease in growth temperature from 15 °C to 5 °C. Around 4% (2944) of the genes were differentially expressed (DE) and only a few of the DE genes (533 upregulated; 206 downregulated) had significant matches to those in the SwissProt database. Most of the annotated DE genes were related to cell membrane composition (fatty acids, sterols, phosphatidylinositol), the membrane enzymes linked to cell energetics, and membrane structure (cytoskeletal proteins and enzymes). In RT2316-13, the synthesis of long-chain polyunsaturated fatty acids occurred through ω3- and ω6-pathways. Enzymes of the alternative pathways (Δ8-desaturase and Δ9-elongase) were also expressed. The upregulation of the genes coding for a Δ5-desaturase and a Δ5-elongase involved in the synthesis of EPA and DHA, explained the enrichment of total lipid with these two long-chain fatty acids at the low temperature. This molecular response has the potential to be used for producing microbial lipids with a fatty acids profile similar to that of fish oils.     

Comparison in Effect of Heatsynch with Heat Detection Aids and CIDR‐Heatsynch in Dairy Heifers

The objective of the present study was to determine whether oestrous detection with the help of oestrous detection aids during the Heatsynch without timed AI protocol is equally effective with the progesterone‐combined protocol in dairy heifers. A total of 148 heifers were randomly assigned to one of the two groups. A group of heifers treated with Heatsynch with heat detection aids (n = 72) received GnRH on day 0, prostaglandin F_2α (PGF_2α) on day 7 and oestradiol benzoate (EB) on day 8, while in controlled internal drug release (CIDR)‐Heatsynch group (n = 76), CIDR was included during a period from GnRH to PGF_2α. Heifers were checked for oestrus twice daily, i.e. from 09:00 to 10:00 hours and from 15:00 to 16:00 hours starting on day 2 for Heatsynch group and on day 8 in CIDR‐Heatsynch group, and continued up to day 12. KAMAR^®heat mount detector (KAMAR^® Inc., Steamboat Springs, CO, USA) and ALL‐WEATHER^® PAINTSTIK^® (LA‐CO Industries Inc., Elk Grove Village, IL, USA) were used as heat detection aids. AI was conducted within 1 h after confirming oestrus in 72 heifers, while 19 animals were transferred with embryo 7 days after oestrus according to the request of the owners. Premature oestrus before PGF_2α injection occurred in 18% of Heatsynch group. Of 13 heifers which showed premature oestrus, six were inseminated and two of them conceived. Oestrus detection rate within 12 days after initiation of the protocols did not differ between the two groups (94% vs 95%). There was no difference in the conception rate after first AI (including heifers that were inseminated before PGF_2α injection) and embryo transfer between Heatsynch with heat detection aids and CIDR‐Heatsynch groups (36% vs 44% and 70% vs 56%). It is concluded that the use of heat detection aids to monitor the occurrence of premature oestrus prior to PGF_2α injection in Heatsynch protocol in dairy heifers was equally effective to the inclusion of CIDR.