Current status and future of land surface models

Although climate conditions primarily determine the distribution and functioning of vegetation, vegetation also influences climate via biophysical and biogeochemical features such as evapotranspiration, albedo, carbon cycling, trace gas emissions and the roughness of the land surface. Forecasts of rapid climate change during the next 100~200 years, fueled by an increase in greenhouse gases, have motivated the development of land surface models (LSMs) that predict changes in vegetation functions. Here, we review how these models have been developed and used to simulate interactive processes between climate and the land surface. Current limitations and future perspectives of the LSMs are also presented.     

Effect of soil solarization on subsequent nitrification activity at elevated temperatures

Soil solarization is a nonchemical method of soil disinfection achieved by covering the soil surface with sheets of vinyl plastic to generate elevated soil temperature, generally over 45°C. Such elevated temperatures may be detrimental to some nitrifying microorganisms and favorable to others. However, little information exists to indicate how nitrification activity in soil is affected after solarization. We performed several experiments to investigate the effects of soil solarization on nitrification activity. We found that: (1) if a soil was subjected to pretreatment of 45 or 50°C for as little as 1 d, nitrification activity in a subsequent incubation at 30°C was less than that of a soil that did not receive any high-temperature pretreatment. However, if a soil received pretreatments of 45 or 50°C for more than 7 d, nitrification activity in a subsequent incubation at 45 or 50°C was greater than that of soil that did not receive high temperature pretreatment. (2) Nitrification activity in three kinds of soil taken from 0–5 cm depth after solarization treatment was greater at 45°C than 30°C. (3) Nitrification activity at 45°C in soil that had received solarization in the preceding year was greater than that in soil that had not been subjected to solarization. This was consistent with the fact that the population densities of ammonia oxidizers were greater in soils that had been subjected to solarization. These results suggest that soil solarization induces nitrifying microorganisms that are more active at 45–50°C than they are at 30°C, and that the effect of solarization on nitrification persists until the next crop season.     

Increase in soil carbon sequestration using rice husk charcoal without stimulating CH4 and N2O emissions in an Andosol paddy field in Japan

Abstract

Biochar application has been recognized as an effective option for promoting carbon (C) sequestration, but it may also affect the production and consumption of methane (CH₄) and nitrous oxide (N₂O) in soil. A 1-year field experiment was conducted to investigate the effects of rice husk charcoal application on rice (Oryza sativa L.) productivity and the balance of greenhouse gas exchanges in an Andosol paddy field. The experiment compared the treatments of rice husk charcoal applied at 10, 20 and 40 Mg ha^?1 (RC10, RC20 and RC40, respectively), rice husk applied at 20 Mg ha^?1 (RH20), and the control (CONT). Rice straw and grain yields did not significantly differ among the treatments. The seasonal cumulative CH₄ emissions were 38–47% higher from RC10, RC20 and RC40 than from the CONT. However, the increases were not in proportion to the application rates of rice husk charcoal, and their values did not significantly differ from the CONT. On the contrary, the RH20 treatment significantly increased the cumulative CH₄ emission by 227% compared to the CONT. The N₂O emissions during the measurement were not affected by the treatments. As a result, the combined global warming potential (GWP) of CH₄ and N₂O emissions was significantly higher in RH20 than in the other treatments. There was a positive linear correlation between C storage in the top 10 cm of soil and the application rate of rice husk charcoal. The increases in soil C contents compared to the CONT corresponded to 98–149% of the C amounts added as rice husk charcoal and 41% of the C added as rice husk. Carbon dioxide (CO₂) fluxes in the off season were not significantly different among RC10, RC20, RC40 and CONT, indicating that C added as rice husk charcoal remained in the soil during the fallow period. The CO₂ equivalent balance between soil C sequestration and the combined GWP indicates that the rice husk charcoal treatments stored more C in soil than the CONT, whereas the RH20 emitted more C than the CONT. These results suggest that rice husk charcoal application will contribute to mitigating global warming without sacrificing rice yields.     

A computerized soil information system for arable land in Japan

A computerized soil information system was compared to manual punch card methods for storage and retrieval of Japanese soil survey data. In spite of the high cost, a soil information system using computers is the most appropriate system for the future, because by this method more than three factors can be analyzed simultaneously, various kinds of soil map data can be stored, retrieved and updated and many kinds of interpretative maps can be constructed automatically. There are large amounts of valuable soil survey data available in Japan which previously were used only for drawing soil maps. These should be utilized to develop a computerized soil information system. At the end of this report, essential processes and the possible structure of a Japanese Soil Information System were discussed.     

Measurement of Si adsorption and “Active Si” in a soil amended with slag fertilizers by using stable isotope 30SP

The silicic acid adsorption by a soil (Eutric Gleysols) where slag fertilizers were applied was measured by the addition of a silicic acid solution labelled with ³⁰Si after soil incubation, in order to study the effect of slag application on the specific Si adsorption by the soil and to estimate the amount of Si in the soil solid phase which can easily enter the soil solution. It was evident that the application of slags increased the ability of soil to adsorb Si. It was also shown that the ³⁰Si added was diluted with not only the Si present in the soil solution but also the Si dissolved from the soil solid phase. We proposed the use of the term “active” for Si in soil which can take part in the isotopic dilution within 1 h. The amount of active Si in the soil solid and liquid phases (D ₆₀ - value) was calculated from the ³⁰Si content in the soil solution and compared with the amount of Si taken up by rice plant (Oryza sativa L.), which was determined in our previous study. The buffering capacity of the soil for Si, which can reflect the ability of soil to maintain the Si concentration in the soil solution constant when Si is added to or removed from the soil, was also determined. The D ₆₀ - value and the Si buffering capacity of the soil increased by slag application. These increases were large when the alkalinity of the applied slags was high. The correlation study revealed that the D ₆₀ - value was a better index of Si availability of the soil than the amount of Si dissolved from the soil solid phase during the incubation when the slags were previously applied.     

Sulfonylurea-resistant biotypes of Monochoria vaginalis generate higher ultraweak photon emissions than the susceptible ones

All living organisms spontaneously generate ultraweak photon emissions, which originate from biochemical reactions in cells. Current research uses the ultraweak photon emission from organisms as a novel indicator in nondestructive analyses of an organisms living state. This study indicates that ultraweak photon emissions from Monochoria vaginalis are different between resistant biotypes (R) to sulfonylurea (SU) and susceptible biotypes (S). In SU-R biotypes, distinct increases in photon emissions were observed, but there was little increase in SU-S biotypes. In addition, photon emissions from the resistant biotypes of M. vaginalis were suppressed by treatment with P450 inhibitors. This suggests that cytochrome P450 monooxygenase, which plays a crucial role in the metabolic detoxification of SUs, could be associated with the generation of ultraweak photon emissions. Ultraweak photon emissions have a potential use in a novel diagnosis system as an indicator in a nondestructive testing of weeds resistant to SUs.     

QTL analysis of panicle morphology response to irrigation regime in aerobic rice culture

In water-efficient rice production, grain yield is often constrained by panicle size. The objective of this study was to genetically dissect the response of panicle morphology to irrigation regimes in aerobic rice culture. We grew ‘Akihikari’ (a lowland japonica cultivar) × ‘IRAT109’ (an upland japonica cultivar) backcross inbred lines in aerobic soils with full or limited irrigation for 2 years, and examined 4 panicle traits—number of florets per panicle (FPP), number of primary branches per panicle (BPP), number of florets per primary branch (FPB), and frequency of pre-flowering floret abortion (%FA)—and grain yield. QTLs for BPP were detected in both the irrigation regimes but QTLs for FPB and %FA were detected mostly only in either of the irrigation regimes. The QTL for FPP on chromosome 2 (RM3421–RM213) coincided with that for yield under full irrigation, showing that this QTL is related to sink capacity and yield potential in aerobic rice culture. On the other hand, the QTL for FPB on chromosome 1 (RM3148–RM243) coincided with that for yield under limited irrigation, when water deficit was moderate. The QTL for root axis length at vegetative stage, previously identified in the same mapping population, was located near this region. This study unravelled the complicated genetic control on panicle morphology in aerobic rice culture, and suggested the positive roles of the dehydration avoidance mechanism by vigorous root growth on panicle size and yield under dry soil conditions.     

Identification of a bacterium isolated from galls on carrot and weeds

In 2004, bacterial galls were found on the roots of carrots in Shizuoka Prefecture, Japan. Galls were about 0.1–2 cm in diameter, light brown in color and had rough surfaces. In 2005, similar galls were found on the roots of three weeds: henbit (Lamium amplexicaule L.), Persian speedwell (Veronica persica Poir.) and leaf mustard (Brassica juncea L.). A bacterium that forms white, rough colonies was isolated from the carrot and weeds galls. The bacterial isolates had properties identical with Rhizobacter dauci Goto and Kuwata. Phylogenetic analysis based on 16S rDNA sequences showed that the carrot isolate had the highest homology (similarity of 100%) with that of the type strain of R. dauci. Rep-PCR genomic fingerprinting using BOX A1R primer showed that the carrot and weeds isolates were nearly identical. Pathogenicity of the isolates was confirmed by inoculating the roots of carrots and the weeds. After 2–5 weeks, they formed galls on the roots of the original host species and on other plant species tested. The galls were indistinguishable from those formed naturally, and the inoculated bacterium was reisolated. Thus, the causal bacterium of carrot and weeds gall was identified as R. dauci, and the bacterium was found to have a wider host range than previously known. These weed hosts may serve as inoculum sources for carrot bacterial gall disease.