Genetic relationships of Portuguese coles and other close relatedBrassica genotypes using nuclear RFLPs

Nuclear RFLPs were used to study the genetic relationships of 2 Portuguese coles, tronchuda cabbage and Galega kale, and 13 otherBrassica oleracea cultivars and 4 nine-chromosome wild brassicas. Cluster and principal coordinates analysis were conducted using RFLP data from 60 probe-enzyme combinations, detecting 277 polymorphic restriction fragments. The results showed that the accessions clustered in five groups: one with all theB. oleracea cultivars except kailan, and the four others isolated with kailan, wildB. oleracea, B. insularis andB. cretica, andB. montana, respectively. Kailan was separated from the other accessions ofB. oleracea cultivars and genetically close to the wildB. oleracea, that was clearly separated from the other nine-chromosome wild brassicas. In theB. oleracea cultivars 3 groupings were clearly individualized: i) including broccolis and cauliflower; ii) with a misture of kales and cabbages originally from Central-North Europe; iii) formed by Portuguese coles. These preliminary results suggest the existence of three major regions of domestication of B. oleracea in Europe: Italy, Central-North Europe and Portugal. Kailan or chinese kale seems to have evolved separately from the otherB. oleracea cultivars in Eastern Asia.     

Antioxidant properties of trans-epsilon-viniferin as compared to stilbene derivatives in aqueous and nonaqueous media

trans-Epsilon-viniferin, the dimer of resveratrol, extracted from Vitis vinifera, has been evaluated for its antioxidant capacity. Its properties have been compared to those of resveratrol and synthetic stilbenic derivatives (4-hydroxystilbene, 4,4'-dihydroxystilbene, 3,5-dihydroxystilbene, and trimethylresveratrol), in regard to their liposolubility using two media with different polarity. The bleaching of beta-carotene by lipoperoxyl (LOO.) radicals in an oil/water (O/W) emulsion and the scavenging of superoxide anions (O(-)(2) in dimethyl sulfoxide (DMSO) using 5,5-dimethyl-1-pyrroline-N-oxide as a spin trap were followed using UV-visible and electron paramagnetic resonance, respectively. Epsilon-viniferin exhibits the best antioxidant capacity in the DMSO/O(-)(2) polar system (IC(50) = 0.14 mM) while 4,4'-dihydroxystilbene presents the highest antioxidant capacity in the O/W/LOO. system (inhibition of beta-carotene bleaching, 82%). Partition coefficients and kinetics of partition between 1-octanol and water were measured to discuss the antioxidant efficiency of the compounds in relation with their chemical structure.     

Heavy metal and PCB spatial distribution pattern in sediments within an urban catchment—contribution of historical pollution sources

Purpose

This work analyzes polychlorinated biphenyl (PCB) and heavy metal contamination in fluvial sediments and soils in an urban catchment, according to the geo-accumulation index and to soil and sediment quality guidelines. The catchment is located in Coimbra, Portugal, being affected by frequent flooding, and its main stream is a tributary to one of the major rivers in Portugal (Mondego). Given the presence of industrial activities over time, some inputs of pollutants are expected, but so far, the legacy of historic pollution in this catchment has not yet been investigated.

Materials and methods

Twenty-five samples were collected from nine sampling sites at the depths of 0–20, 20–40 and 40–60 cm (to provide a historic perspective) along longitudinal profiles (streamlines) and in soils downstream of pollution sources. These samples were analyzed for six heavy metals (Cu, Cr, Pb, Cd, Zn, Ni), organic carbon, pH and ten PCBs (IUPAC numbers 28, 30, 52, 101, 138, 153, 166, 180, 204, 209).

Results and discussion

Total PCB concentrations ranged 0.47–5.3 ng g^?1 dry weight (dw), and levels increase from the bottom to the top layers, suggesting an increased input over the last 100 years. PCB congener distribution shows the dominance of hexachlorobiphenyls, especially PCB138, suggesting the existence of local sources. PCB levels did not exceed sediment quality levels, placing sediments/soil under class 1 (not contaminated) or class 2 (trace contamination) with respect to PCB. All six metals exceeded the lowest effect level for sediment quality criteria, and three (Cd, Pb and Zn) largely exceeded the clean levels for dredged materials, placing sediments in class 5 (heavily contaminated). Sampling site S1 presented the highest concentrations of Zn, Pb and Cd, and historic vehicle traffic was identified as the most likely source, given the vertical and horizontal profiles.

Conclusions

High levels of Pb, Cd and Zn were found in fluvial sediments at some locations of the Loreto catchment, likely from historic traffic sources. This urban area is frequently affected by flooding events and is currently being subject to urban redevelopment. During these events/actions, historic pollutants in the sediments might surface and be redistributed, impacting the downstream ecosystem of the major Mondego River or increasing the risk of exposure of the urban population.

     

Redistribution of 10B Absorbed by Leaves and Roots of Cashew Seedlings

Boron (B) is transported mainly in the xylem, but by using isotopic tracers it was possible to verify that B has significant mobility in the phloem of polyols-producing species. Thus, the objective of this study was to evaluate the mobility of ¹⁰B applied to cashew plants. The experiment was conducted from 05/10 to 07/10/2010 in a greenhouse of University of São Paulo State-UNESP, Ilha Solteira Campus, State of São Paulo, Brazil. 0.5 mg of B L^?1 of soil was used in the substrate. A solution of 255 mg of B L^?1 was used in recently mature and fully developed leaves. The total content of B and and percentage of boron in the plant derived from fertilizer (Bppf%) were evaluated in the old and new leaves stemming at 30 and 60 days after the application of ¹⁰B. As evidenced, B applied to leaves had restricted mobility in cashew tree. However, B applied in the substrate was absorbed and translocated to young leaves.     

Risk assessment of dietary exposure to pesticides using a Bayesian method

Risk assessment of pesticides can be a statistically difficult problem because pesticides occur only occasionally, but they may occur on multiple components in the diet. A Bayesian statistical model is presented which incorporates multivariate modelling of food consumption and modelling of pesticide measurements which are for a large part below a measurement threshold. It is shown that Bayesian modelling is feasible for a limited number of food components, and that in a data-rich situation the model compares well with an empirical Monte Carlo modelling.     

Development of specific PCR primers for identification and detection of <Emphasis Type="Italic">Phytophthora capsici</Emphasis> Leon

A PCR-based method was developed for the identification and detection of Phytophthora capsici in pepper plants. Three PCR primers (CAPFW, CAPRV1 and CAPRV2) specific for P. capsiciwere designed based on the sequence of its internal transcribed spacer regions. CAPFW/CAPRV1 amplify a 452 bp product from P. capsici DNA whereas CAPFW/CAPRV2 a 595 bp fragment; neither set amplifies DNA from pepper or several fungi pathogenic to pepper. In conventional (single-round) PCR, the limit of detection was 5 pg DNA for both primer sets, whereas in nested PCR the detection limit for both was of 0.5 fg. However, when the dilution series of target DNA were spiked with plant DNA, amplification declined two-fold in both conventional and nested PCR. The CAPFW/CAPRV2 set in conventional PCR was used to detect P. capsici DNA in inoculated plants. Detection occurred as soon as 8h post-inoculation in stem samples from infected but still symptomless plants. The method was also tested to detect fungal DNA in infected soils.     

Estimated BVDV-prevalence, -contact and -vaccine use in dairy herds in Northern Portugal

A study to evaluate BVDV-prevalence, recent -contact and -vaccine use in dairy herds in the "Entre Douro e Minho" (EDM) region in North Portugal was carried out in 124 dairy herds in 2003. Herds were visited to ascertain BVDV-vaccine use and to collect a bulk tank milk (BTM) sample and serum from 1268 cattle to analyse BVDV-antibodies using an NS2-3 ELISA. Fifty-three percent of farmers used inactivated BVDV-vaccines whilst the remaining farmers were not presently using BVDV-vaccines. BMT-antibody results included 35% positives, 25% negative and 39% inconclusive, and were similar in vaccinated and non-vaccinated herds (p>0.05) and allowed estimating a 10% BVDV herd-prevalence from prior knowledge of the relationship between BMT-antibody results and probability of PI cattle in the herd. Overall individual seroprevalence was 27% and was 23% in non-vaccinated and 36% in vaccinated cattle (p<0.05). Contact of the herd with BVDV was assessed according to seroprevalence in young and adult cattle in the herd and it was estimated that 35% of herds were infected or had recent contact with BVDV, 40% were not infected and did not have recent contact with BVDV and the BVDV-infection and -contact status of remaining herds was undetermined. The results from this study indicate BVDV is endemic and BVDV-vaccines are widespread in the dairy-cattle population in EDM region in Portugal.     

Integrating Fire Risk Considerations in Forest Management Planning in Spain – A Landscape Level Perspective

It is reasonable to assume that there is a relationship between the spatial distribution of forest fuels and fire hazards. Therefore, if fire risk is to be included into numerical forest planning, the spatial distribution of risky and non-risky forest stands should be taken into account. The present study combines a stand-level fire risk model and landscape level optimization to solve forest planning problems in which the fire risk plays an important role. The key point of the method was to calculate forest level fire resistance metrics from stand level indices and use these metrics as objective variables in numerical optimization. This study shows that maximizing different landscape metrics produces very different landscape configurations with respect to the spatial arrangement of resistant and risky stands. The landscapes obtained by maximizing different metrics were tested with a fire spread simulator. These tests suggested that the mean fire resistance of the landscape, which is a non-spatial metric, is the most important factor affecting the burned area. However, spatial landscape metrics that decrease the continuity of fire resistance in the landscape can significantly improve the fire resistance of the landscape when used as additional objective variables.     

Detection of the enterotoxins A, B, and C genes in Staphylococcus aureus from goat and bovine mastitis in Brazilian dairy herds

To determine the distribution of genes that encode enterotoxins A, B and C, 36 strains of Staphylococcus aureus isolated from goat mastitis and 64 isolated from bovine mastitis were analyzed by Multiplex PCR. Of the total strains studied, 37 (37%) were detected to have some of the SEs genes. From the bovine mastitis strains, 4 (6.3%) co-amplified the sea and seb genes and 2 (3.1%) were positive for the sec gene. From the goat mastitis strains, 31 (86%) tested positive to the Multiplex, and the sec gene was detected in all of them. The production of SE was detected in all strains harboring the corresponding gene. The results demonstrated that S. aureus isolated from goat mastitis had a higher enterotoxigenic potential than those isolated from bovine mastitis. Additionally, the presence of the sec gene in the majority of goat mastitis strains suggests a possible involvement of SEC in goat mastitis pathogenesis.