A simultaneous estimation procedure for the parameters of the maximum size–density line and self-thinning curve to predict stand development of fast-growing tropical species

A simultaneous estimation procedure for the parameters of two functions, i.e., the maximum size–density line and the self-thinning curve, is presented to predict stand development for fast-growing tropical species. This procedure assumes that the rate of periodic reduction in stand density with increasing quadratic mean diameter on a logarithmic scale (r) will increase inversely proportionally to the distance from the maximum size–density line and consequently equals the slope of the line at distance 0. Under this assumption, the maximum size–density line can be incorporated into the self-thinning curve to form an integrated equation with three parameters: k and m, the slope and constant of the maximum size–density line, and a, the rate of reduction of r of the self-thinning curve. These parameters are estimated simultaneously using measurement data on stand density, quadratic mean diameter, and the corresponding r. This procedure was evaluated by application to two data sets: 186 measurements of Acacia mangium and 95 measurements of Paraserianthes falcataria, for which the parameters k and m have previously been calculated. The parameters estimated using this procedure were in good agreement with previous ones based on the A. mangium data set, and the differences found for the P. falcataria data set were also small, within the error variances. Therefore, it is concluded that the proposed procedure would give almost the same estimates from a single calculation step as the previous procedure that required two separate calculation steps.     

A New Approach for Characterization of Single Raindrops

To determine the characteristics of single raindrops as a function of their size, the collodion film method was newly applied to the sampling of single raindrops. Sampling of single raindrops was performed at a height of 20 m above ground level of the Kyoto University building located in Uji, Japan during rain events from September to November 1999. It was possible to get successfully replicas of raindrop by collodion film method. And we tried to analyze the elemental components of the nuclei and pollutants that were incorporated into the developing raindrop. To the analysis of single raindrops, Particle Induced X-ray Emission (PIXE) was applied. Several elements including S in single raindrops were detected by PIXE. The concentrations of every element increased with decreasing drop diameter. Furthermore, to acquire more detailed information such as inner-structure and mixing state in single raindrops, micro-PIXE analysis was performed. The nucleation centers of single raindrops were successfully analyzed by micro-PIXE. Ca, S and Fe were apparently detected by scanning beam of 1 ～ 2 µm diameter and about 70 pA beam current.     

Transgenic inhibition of synaptic transmission reveals role of CA3 output in hippocampal learning

The hippocampus is an area of the brain involved in learning and memory. It contains parallel excitatory pathways referred to as the trisynaptic pathway (which carries information as follows: entorhinal cortex --> dentate gyrus --> CA3 --> CA1 --> entorhinal cortex) and the monosynaptic pathway (entorhinal cortex --> CA1 --> entorhinal cortex). We developed a generally applicable tetanus toxin-based method for transgenic mice that permits inducible and reversible inhibition of synaptic transmission and applied it to the trisynaptic pathway while preserving transmission in the monosynaptic pathway. We found that synaptic output from CA3 in the trisynaptic pathway is dispensable and the short monosynaptic pathway is sufficient for incremental spatial learning. In contrast, the full trisynaptic pathway containing CA3 is required for rapid one-trial contextual learning, for pattern completion-based memory recall, and for spatial tuning of CA1 cells.     

Dentate gyrus NMDA receptors mediate rapid pattern separation in the hippocampal network

Forming distinct representations of multiple contexts, places, and episodes is a crucial function of the hippocampus. The dentate gyrus subregion has been suggested to fulfill this role. We have tested this hypothesis by generating and analyzing a mouse strain that lacks the gene encoding the essential subunit of the N-methyl-d-aspartate (NMDA) receptor NR1, specifically in dentate gyrus granule cells. The mutant mice performed normally in contextual fear conditioning, but were impaired in the ability to distinguish two similar contexts. A significant reduction in the context-specific modulation of firing rate was observed in the CA3 pyramidal cells when the mutant mice were transferred from one context to another. These results provide evidence that NMDA receptors in the granule cells of the dentate gyrus play a crucial role in the process of pattern separation.     

GaN photonic-crystal surface-emitting laser at blue-violet wavelengths

Shorter-wavelength surface-emitting laser sources are important for a variety of fields, including photonics, information processing, and biology. We report on the creation of a current-driven blue-violet photonic-crystal surface-emitting laser. We have developed a fabrication method, named "air holes retained over growth," in order to construct a two-dimensional gallium nitride (GaN)/air photonic-crystal structure. The resulting periodic structure has a photonic-crystal band-edge effect sufficient for the successful operation of a current-injection surface-emitting laser. This represents an important step in the development of laser sources that could be focused to a size much less than the wavelength and be integrated two-dimensionally at such short wavelengths.     

Cellularity of developing subcutaneous adipose tissue in Landrace and Meishan pigs: Adipocyte size differences between two breeds

Experiments were designed to compare the adipocyte cellularity of subcutaneous adipose tissue between growing Landrace (low backfat) and Meishan (high backfat) pigs at 1 week, 3 weeks, 6 weeks, 3 months and 5 months of age. As pigs aged, body weight and backfat thickness of both breeds significantly increased. When compared at equal ages, backfat thickness adjusted to equal body weight was greater for Meishan pigs. The mean diameter of fat cell size also increased with age, and by 6 weeks adipocytes from both outer and inner layers of subcutaneous adipose tissue were larger in Meishan pigs. At 5 months, approximately 80% of the adipose tissue mass in Meishan pigs was attributable to adipocytes measuring 95–165 µm in diameter, whereas adipocytes of 75–145 µm comprised most of the tissue mass in the Landrace. Although the contribution of smaller adipocytes (25–45 µm) to the tissue volume was negligible, both breeds showed a biphasic diameter distribution at all ages, suggesting that adipocyte hyperplasia is still active. Our results demonstrate that cellularity differences exist between the subcutaneous adipose tissues of Landrace and Meishan pigs, and adipocyte hypertrophy is the most overwhelming contributor to the greater backfat deposition for Meishan pigs.     

Morphological analysis of viral communities in the floodwater of a Japanese paddy field

Capsid size distributions of viral communities in the floodwater of a Japanese paddy field under a long-term fertilizer trial were surveyed during the rice cultivation period by using transmission electron microscopy. The capsid size distributions were monophasic, and the median values fell within the range of 50-70 nm. The quartile intervals were narrow from either 40-50 nm or 50-60 nm to either 60-70 nm or 70-80 nm for most samples. There was no clear seasonal variation in the capsid size distribution of viral communities. The difference in size distributions among different fertilizer plots was also not found. Viral communities in the floodwater were predominated by isometric icosahedral forms. Viruses with octahedral capsids and elongated ones were rare and sporadic in the floodwater.     

Carbon and nitrogen stocks and their mineralization potentials are higher under organic than conventional farming practices in Japanese Andosols

ABSTRACT

This study aimed at understanding whether and how long-term organic rice farming affects soil carbon (C) and nitrogen (N) stocks and their mineralization potentials in submerged rice paddies in Tochigi, Japan. An incubation experiment was carried out to assess the impacts of internal nutrient cycling after organic farming (OF) for 4–5 years (4OF), 8–9 years (8OF), and 12 years (12OF), compared with a conventional rice field (CF). Soil samples were collected at 0–15 cm and 15–20 cm in flooded rice fields after harvest in October 2013. pH and bulk density at 0–15 cm were significantly lower in 12OF fields than in CF fields (by 0.22 unit pH and 17.5%, respectively). Compared with CF, 12OF fields showed significant differences in soil organic carbon (SOC) and total nitrogen (TN), but 4OF and 8OF fields did not. In 8OF fields, the C decomposition (Co) and N mineralization (No) potentials were significantly higher (by 34.0% and 35.6%, respectively, at 0–15 cm, and by 67.1% and 24.5% at 15–20 cm) than in CF fields. Similarly, in 8OF fields at 0–15 cm, the Co:SOC and No:TN ratios were 19.8% and 23.2% higher, respectively, than in CF fields. Co, No, Co:SOC, and No:TN in 12OF fields were higher than those in CF fields, demonstrating the effects of prolonged organic rice farming. Additionally, in 12OF fields, C and N stocks were significantly higher (by 15.5% and 17.2%, respectively, at 0–15 cm, and by 4.8% and 12.1% at 15–20 cm) than in CF fields. Our findings suggest that long-term organic rice farming increases soil C and N stocks as well as C and N mineralization in Japanese Andosols.