How well does a botanical garden collection of a rare palm capture the genetic variation in a wild population?

Conservation is increasingly central to the botanic garden mission. Living plant collections are important components of conservation. Critical evaluation of living conservation collections with population genetic analysis can directly inform ex situ conservation strategy. Here, we quantify the degree of genetic variation captured through a population-based collection protocol, and explore optimal sampling for ex situ conservation. An extensive living collection derived from one population of Leucothrinax morrisii (Arecaceae) provided a model system. We compared 58 specimens from the ex situ collection with 100 individuals from throughout the parent population via 6 ISSR loci. Random bootstrapped resamples of the data were made to model differently structured ex situ collections. Mean diversity (He) differed little between the collection (0.204) and the population (0.216), and genetic distance (D) was very close (0.036). Very few private alleles were found between the collection and the population. Allelic capture, as measured by percent of private alleles, was greater than 94%. Resampled collections of different sizes captured from 48% to 94% of alleles. Pairwise comparison of bootstrapped resamples suggests that increasing the representation of half-sibling groups does not significantly increase allele capture. Increase in allele capture with increasing sample size is greatest at low resample sizes, and showed diminishing returns as resample size increased. No appreciable increase in allele capture was gained through maintaining different half-sibling groups. These data inform sampling for ex situ conservation purposes, and recommend sample sizes of at least 15 individuals, with the upper limit based on resources.     

Range fidelity: The missing link between caribou decline and habitat alteration?

Conservation of forest-dwelling caribou (Rangifer tarandus caribou) is of great concern across most of its range. Anthropogenic disturbances, primarily logging activities, have been identified as the most important cause of caribou decline, although the mechanisms underlying this decline are not fully understood. Caribou commonly display fidelity to calving sites or seasonal ranges, but the potential role of this life-history trait has been largely overlooked in research and conservation planning. This is surprising because sites and ranges with high inter-annual use should have high conservation value. We investigated the relationship between habitat disturbances and home-range fidelity of forest-dwelling caribou across three study sites in Québec, Canada, using a broad range of natural and anthropogenic disturbances. Between 2004 and 2007, we tracked 47 adult female caribou using GPS collars. Home-range fidelity varied between seasons, being higher during calving and summer, and lower during winter. Caribou reduced fidelity following natural and anthropogenic disturbances, the latter having a stronger negative influence. Anthropogenic disturbances had a strong negative impact on home-range fidelity during annual, summer and winter periods, whereas natural disturbance was the dominant factor during calving. Despite this negative influence on fidelity, caribou tended to demonstrate range fidelity even in study sites most impacted by human activities. Habitat disturbances could produce two possible outcomes for caribou conservation: (1) a trend for females to reduce home-range fidelity which could translate into lower calf and female caribou survival through reduced familiarity with food distribution, escape cover and predation risk and (2) a global tendency to maintain range fidelity even in a drastically modified landscape which could turn into an ecological trap, particularly for calves when predation risk increases due to increased black bear density in early successional forests. Taking range fidelity behavior into consideration during forest management planning could direct conservation efforts toward the best available sites and therefore facilitate caribou persistence in managed landscapes.     

Comparison of Docosahexaenoic Acid (22:6n-3) Levels in Various Artemis Strains during Enrichment and Subsequent Starvation

Abstract.— The aim of this study was to compare the levels of docosahexaenoic acid (DHA, 22:6n-3) in three different bisexual and one parthenogenetic strains of Artemia after enrichment. Freshly-hatched nauplii from A. franciscana (Great Salt Lake, USA), A. sinica (Yimeng, P. R. China), A. persimilis (Argentina), and A. parthenogenetica (Tanggu, P. R. China) were enriched with a purified lipid emulsion containing 95% DHA ethyl esters (% total fatty acids) and subsequently starved. All strains had very low initial DHA levels (< 0.3 mg/g dry weight). Initial eicosapentaenoic acid, 20:5n-3 (EPA) levels were high in A. parthenogenetica (18.2 mg/g dry weight) as compared to those in the other strains (4.6-8.5 mg/g dry weight). After 24-h enrichment, A. sinica contained the highest DHA level (37.0 mg/g dry weight) as well as the highest DHA/ EPA ratio (3.7). The lowest DHA enrichment levels were found in A. franciscana and A. parthenogenetica (26.3 and 22.7 mg/g dry weight, respectively). During the subsequent 24-h starvation period, the contents of DHA decreased rapidly in all strains, whereas EPA levels remained relatively stable. This indicates the high catabolism of DHA for energy production, the relative conservation of EPA, and possibly a partial bioconversion of DHA to EPA during the starvation period in each species.     

ENDOSCOPIC ULTRASOUND INSTRUMENTATION, APPLICATIONS IN HUMANS, AND POTENTIAL VETERINARY APPLICATIONS

Endoluminal scanning under endoscopic guidance, or endoscopic ultrasonography (EUS), has become the most significant advance for imaging the gastrointestinal (GI) tract wall and contiguous organs in the past 20 years. It was originally designed to overcome the limitations in humans to imaging the abdominal organs transabdominally, such as large penetration depths and GI air. This imaging modality provides detailed images of pathological processes both within and outside of the GI wall since a high-frequency transducer can be brought into close proximity with the target regions. It has found most success in humans for the staging of lung, gastric, and esophageal cancer, the detection of both lymphatic and hepatic metastases, and diagnosis of pancreatitis and pancreatic cancer, as well as achieving an important role in interventional and therapeutic procedures. The EUS examination can be performed to examine both the thorax and abdomen in animals when both conventional transthoracic or transabdominal ultrasound are inadequate due to intervening air, bone, large penetration depths, or obesity. The echoendoscope is similar to a conventional endoscope but has an ultrasound transducer at its tip. Both radial and linear multifrequency scanners are available. Linear scanners allow fine-needle aspiration (FNA) of the bowel wall or extraluminal structures. Transducer coupling is either by direct mucosal contact or by inflation of a water-filled balloon surrounding the transducer. Current thoracic applications for EUS in veterinary medicine include examination of the mediastinum, bronchial lymph nodes, esophagus, and pulmonary lesions as well as FNA of pulmonary masses. Abdominal applications include examination of both pancreatic limbs and the liver, including portosystemic shunts, detection of lymphadenomegaly, and examination of the gastric wall, duodenum, and jejunum. Other potential applications in dogs and cats include tumor staging and intrapelvic ultrasound.     

Growth and Feed Utilization of Captive Wild Subadult Black Sea Bass Centropristis striata Fed Practical Diets in a Recirculating System

The effects of four practical diets on growth, feed utilization, and body composition of wild‐caught juvenile and subadult black sea bass Centropristis striata (316 ± 113 g =±± SD) were compared for 221 d in a recirculating tank system consisting of 12 2,660‐L tanks. Salinity averaged 33.5 ppt and temperature averaged 20.9 C but vaned from 12 to 27.1 C. Diets differed in crude protein (CP) and crude lipid (CL) as follows: 1) low CP (44.0%), low CL (11.4%) trout diet; 2) low CP (44.8%), high CL (15.0%) trout diet; 3) midlevel CP (47.9%), midlevel CL (12.8%) Bounder diet; and 4) high CP (53.9%), high CL (15.1%) marine finfish diet. Energy: protein ratios (E: P) were 44.6, 45.3, 41.8, and 39.1 W/g. Survival to 221 d on all diets was 100%. Significant (P < 0.05) differences in growth rates were observed among diets. Final weights were higher for midlevel and high CP diets 3 and 4 (1,051 and 1,013 g) than for low CP diet 1 (873 g). Relative growth rate (RGR, % total increase in weight), specific growth rate (SGR, % increase in body weight/d), and daily weight gain (DWG, g/d) were higher for higher CP diets 3 and 4 (RGR = 223 and 221; SGR = 0.53; DWG = 3.28 and 3.16), than for low CP diet 1 (RGR = 181; SGR = 0.47; DWG = 2.54). There were no significant differences between initial and final whole body protein and fiber content among diets. Lipid and gross energy levels significantly increased (P < 0.0001) in all treatments while moisture levels significantly decreased (P < 0.001). Although these differences were not significant, feed conversion ratio (FCR = dry weight fed/wet weight gain) was lower for fish given midlevel CP diet 3 (1.49) and high CP diet 4 (1.52) than for those fed low CP diets 1 and 2 (1.60 and 1.62). Protein efficiency ratios (PER = weight gain/weight protein fed) (1.43 to 1.24), apparent net protein retention (ANPR = weight protein gain/weight protein fed) (20 to 25%), and apparent net energy retention (ANER = energy gain/energy fed) (53.3 to 56.8%) were not significantly different among treatments. The midlevel CP (50%), midlevel CL (12%) diet maximized growth rates and was also significantly less expensive per kg fish weight produced ($1.40) than the high CP diet ($1.94) which produced the second highest growth rates. These results demonstrated that wild‐caught black sea bass can be successfully reared in recirculating tanks from juvenile to marketable sizes with high survival and with good feed conversion and growth on commercially prepared diets with a wide range of protein and lipid levels.     

Treatment of a recurrent ocular squamous cell carcinoma in a horse with Iridium-192 implantation

A 7-year-old Selle français gelding was presented for a recurrent conjunctival tumour on the left eye. A previous histologic analysis revealed a conjunctival squamous cell carcinoma. As it was the third recurrence after surgical excision in a 1½-year period, we decided to perform interstitial radiotherapy combined with the surgical excision. Two Iridium-192 pins were implanted in the subcutaneous fascia of the lower eyelid over the tumor site and were removed 3 days later. No postoperative adverse reactions were observed. Twelve months postoperatively, there were no signs of local recurrence. Surgical excision combined with Iridium-192 therapy appeared to be an effective treatment in this case.     

Inheritance of resistance to angular leaf spot in common bean and validation of the utility of resistance linked markers for marker assisted selection out side the mapping population

Inheritance of resistance to angular leaf spot (ALS) disease caused by Phaeoisariopsis griseola (Sacc.) Ferr was investigated in two common bean cultivars, Mexico 54 and BAT 332. Both Andean and Mesoamerican backgrounds were used to determine the stability of the resistance gene in each of the two cultivars. Resistance to P. griseola was phenotypically evaluated by artificial inoculation with one of the most widely distributed pathotypes, 63–39. Evaluation of the parental genotypes, F₁, F₂ and backcross populations revealed that the resistance to angular leaf spot in the cultivars Mexico 54 and BAT 332 to pathotype 63–39 is controlled by a single dominant gene, when both the Andean and Mesoamerican backgrounds were used. Allelism test showed that ALS resistance in Mexico 54 and BAT 332 to pathotype 63–39 was conditioned by the same resistance locus. Resistant and susceptible segregating populations generated using Mexico 54 resistant parent were selected for DNA extraction and amplification to check for the presence /absence of the SCAR OPN02 and RAPD OPE04 markers linked to the Phg-2 resistance gene. The results indicated that the SCAR OPN02 was not polymorphic in the study populations and therefore of limited application in selecting resistant genotypes in such populations. On the other hand, the RAPD OPE04 marker was observed in all resistant individuals and was absent in those scored susceptible based on virulence data. Use of the RAPD OPE04 marker in marker-assisted selection is underway.     

Antimicrobial and physicochemical properties of chitosan-HPMC-based films

To prepare composite films from biopolymers with anti-listerial activity and moisture barrier properties, the antimicrobial efficiency of chitosan-hydroxy propyl methyl cellulose (HPMC) films, chitosan-HPMC films associated with lipid, and chitosan-HPMC films chemically modified by cross-linking were evaluated. In addition, the physicochemical properties of composite films were evaluated to determine their potential for food applications. The incorporation of stearic acid into the composite chitosan-HPMC film formulation decreased water sensitivity such as initial solubility in water and water drop angle. Thus, cross-linking of composite chitosan-HPMC, using citric acid as the cross-linking agent, led to a 40% reduction in solubility in water. The water vapor transfer rate of HPMC film, approximately 270 g x m(-2) x day(-1) x atm(-1), was improved by incorporating chitosan and was further reduced 40% by the addition of stearic acid and/or cross-linking. Anti-listerial activity of films was determined on solid medium by a numeration technique. Chitosan-HPMC-based films, with and without stearic acid, inhibited the growth of Listeria monocytogenes completely. On the other hand, a loss of antimicrobial activity after chemical cross-linking modification was observed. FTIR and 13C NMR analyses were then conducted in order to study a potential chemical modification of biopolymers such as a chemical reaction with the amino group of chitosan. To complete the study, the mechanical properties of composite films were determined from tensile strength assays.