Development of a method for live octopus (Octopus vulgaris) transportation for long distance at high densities

The development of new octopus‐based products with a growing economic value ensures the commercial interest of this species, making live octopus export an activity of great interest. The aim of this study was to develop a method for long‐distance transportation of live octopus at high densities. The system was composed by 220‐L tanks with cooling and aeration, where the animals were kept separated from each others. The water temperature was maintained at 10°C, after a decreasing of 1°C/hr. Live octopus transportation was tested for 48 hr at two densities: 50 kg/m³ and 100 kg/m³. During this period, water parameters were monitored. Stress response was evaluated through the analysis of haemolymph, muscle and brain tissues. No mortality was registered after 48 hr for both treatments. In all trials, water quality remained within the normal limits in both densities; there was, however, a significative increase of ammonia levels in the water. Ammonia, dopamine and Hsp70 levels were analysed in the beginning and at the end of the experiment for both densities; however, no significant differences were found among them. In general, this system seems to be a viable solution for live octopus 48‐hr transportation at a density of 100 kg/m³.     

Recirculation nursery systems for bivalves

In order to increase production of bivalves in hatcheries and nurseries, the development of new technology and its integration into commercial bivalve hatcheries is important. Recirculation aquaculture systems (RASs) have several advantages: high densities of the species can be cultured resulting in a cost-effective production system; optimal temperature maximizes production and allows rapid turnover of the product; stable water quality improves growth rate and minimizes stress and potential loss by diseases. Pilot RAS systems were developed for seed rearing of oysters (Crassostrea gigas), scallops (Pecten maximus), mussels (Mytilus edulis) and clams (Ruditapes decussatus). Optimal feed addition and waste matrix were determined. Based on this, system flow rates were designed. Seed growth in the pilot RAS systems was compared at different renewal rates and with growth in flow-through systems (FTS). All four species can be reared in RAS and showed similar growth in RAS and in FTS or in RAS with a higher renewal rate. RAS can keep O₂, nitrogen and pH within the desired range. Temperature was generally higher in RAS than in FTS, probably due to heat induced by the pump circulating the water. The supply of sufficient amount of food in combination with a desire to reduce the renewal rate calls for use of concentrated feed in RAS.     

Modeling genetic differences of combined broiler chicken populations in single-step GBLUP

The introduction of animals from a different environment or population is a common practice in commercial livestock populations. In this study, we modeled the inclusion of a group of external birds into a local broiler chicken population for the purpose of genomic evaluations. The pedigree was composed of 242,413 birds and genotypes were available for 107,216 birds. A five-trait model that included one growth, two yield, and two efficiency traits was used for the analyses. The strategies to model the introduction of external birds were to include a fixed effect representing the origin of parents and to use unknown parent groups (UPG) or metafounders (MF). Genomic estimated breeding values (GEBV) were obtained with single-step GBLUP using the Algorithm for Proven and Young. Bias, dispersion, and accuracy of GEBV for the validation birds, that is, from the most recent generation, were computed. The bias and dispersion were estimated with the linear regression (LR) method,whereas accuracy was estimated by the LR method and predictive ability. When fixed UPG were fit without estimated inbreeding, the model did not converge. In contrast, models with fixed UPG and estimated inbreeding or random UPG converged and resulted in similar GEBV. The inclusion of an extra fixed effect in the model made the GEBV unbiased and reduced the inflation. Genomic predictions with MF were slightly biased and inflated due to the unbalanced number of observations assigned to each metafounder. When combining local and external populations, the greatest accuracy can be obtained by adding an extra fixed effect to account for the origin of parents plus UPG with estimated inbreeding or random UPG. To estimate the accuracy, the LR method is more consistent among scenarios, whereas the predictive ability greatly depends on the model specification.     

Understanding the naturalization of <Emphasis Type="Italic">Eucalyptus globulus</Emphasis> in Portugal: a comparison with Australian plantations

Despite the potential utility of a biogeographical approach to understanding the naturalization of exotic species, studies using this approach are scarce. Eucalyptus globulus is an economically important Australian tree species that has become naturalized in a number of countries where it was introduced. Portugal is an ideal territory to study the naturalization of E. globulus owing to: a long introduction history, the antipodal location compared to Australia and the large cultivated area. Wildling density was assessed in 116 E. globulus plantations in central Portugal through 213 transects established along plantation borders. Boosted regression trees were used to model the influence of plantation-scale variables. Results from this survey were compared with data obtained in plantations from seven Australian regions, where a similar sampling protocol had been used. In Portugal, wildlings were more abundant in plantations that were: located in moist aspects, coppiced, with older tree stems and corresponding to intermediate site growth indexes. The overall density (127 plants ha^?1) was 14.9 times higher than in the Australian estate, but this ratio was reduced to 3.1 in a more comparable subset of unburnt, first rotation plantations. A generalized linear model fitted using a dataset combining the two surveys showed that country influenced wildling density, together with plantation rotation and stem age. These results provide insights into the naturalization of a widely cultivated tree species, pointing to a fundamental role of the introduction history, possibly acting along with the biogeographical characteristics of the introduced range.     

Consumption of shark products: The interface of sustainability,trade (mis)labelling,human health and human rights

Sharks and rays evolved 450 million years ago, during the Late Ordovician Period. However, during the modern Anthropocene, shark populations have declined at considerable rates, and recent global assessments indicate about one in three species is threatened with extinction. A notable reason for this elevated extinction risk is overfishing linked to increased demand for shark fins and other products. Here, we review multiple dimensions of consuming shark products, ranging from stock sustainability, product (mis)labelling and trade, the human health implications of consuming shark products, and illegal, unreported and unregulated fishing and slavery and labour abuses in the fishing industry. We conclude that traceability and increased transparency in seafood supply chains is essential to overcome obstacles to consumption of sustainable, ethical and healthy shark products. We also provide a decision tree outlining steps in consumer choice that would foster such consumption. Our aim is to provide a holistic view on issues concerning the consumption of shark products that will help policymakers, the public, management and law enforcement agencies to advocate for ecologically- and ethically sustainable consumption of shark products and thereby empower the general public to make informed decisions on which shark products they consume.     

Reflex activities of the upper airway muscles during experimental nasal occlusion in anesthetized dogs

Reflex responses of the upper airway muscles during experimental nasal and tracheal occlusions were studied in 21 anesthetized dogs breathing through the nose or a tracheostomy (tracheal cannula). Out of them, five animals were examined for maintained negative and positive pressures applied to the isolated upper airway. When the nose was occluded at end-expiration during three consecutive breathings, the electromyographic (EMG) activity of alae nasi (AN) and posterior cricoarytenoid (PCA) muscle markedly increased. The upper airway was subjected to negative pressure, -2.41 approximately -3.04 kPa (n = 34) by these nasal occlusions. The activity of upper airway muscles was also increased by tracheal occlusions. However, such augmentation of PCA activity was much less in tracheal occlusions than nasal occlusions, whereas there was the smaller difference in AN activity between both occlusions. During nasal occlusions, a prolongation of the inspiratory time (TI) was observed. Furthermore, maintained negative pressure applied to the isolated upper airway provoked an augmentation of PCA activity. Such an augmented EMG activity of PCA and the prolongation of TI were largely diminished by sectioning the superior laryngeal nerves. These results proves that the upper airway muscles play an important role to protect the upper airway from collapsing by nasal occlusions. In addition, it is suggested that a lack of lung volume feedback is substantially concerned with the activation of AN, while negative pressure in the upper airway is essential to stimulate PCA.     

Development of PCR Primers for a New Fusarium oxysporum Pathogenic on Paris Daisy (Argyranthemum frutescens L.)

The inverse PCR technique was applied to clone genomic DNA flanking insertion sites of sequences homologous to the transposable element Fot1 in the genome of a new pathogenic isolate of Fusarium oxysporum obtained from wilted Argyranthemum frutescens (Paris daisy). Based on the genomic flanking regions, a primer was designed which when paired to a second primer matching the Fot1 sequence allowed detection of this pathogen by PCR. The primer pair Mg5/Mg6 could specifically identify nine tested isolates of F. oxysporum from A. frutescens, when fungal genomic DNA was used as template. Moreover, the primer pair Mg5/Mg6 allowed successful detection of the pathogen in stem and root tissue from asymptomatic plants that were artificially inoculated with a representative isolate of F. oxysporum from A. frutescens.     

Determining the stability of accuracy of genomic estimated breeding values in future generations in commercial pig populations

Genomic information has a limited dimensionality (number of independent chromosome segments [M_e]) related to the effective population size. Under the additive model, the persistence of genomic accuracies over generations should be high when the nongenomic information (pedigree and phenotypes) is equivalent to M_e animals with high accuracy. The objective of this study was to evaluate the decay in accuracy over time and to compare the magnitude of decay with varying quantities of data and with traits of low and moderate heritability. The dataset included 161,897 phenotypic records for a growth trait (GT) and 27,669 phenotypic records for a fitness trait (FT) related to prolificacy in a population with dimensionality around 5,000. The pedigree included 404,979 animals from 2008 to 2020, of which 55,118 were genotyped. Two single-trait models were used with all ancestral data and sliding subsets of 3-, 2-, and 1-generation intervals. Single-step genomic best linear unbiased prediction (ssGBLUP) was used to compute genomic estimated breeding values (GEBV). Estimated accuracies were calculated by the linear regression (LR) method. The validation population consisted of single generations succeeding the training population and continued forward for all generations available. The average accuracy for the first generation after training with all ancestral data was 0.69 and 0.46 for GT and FT, respectively. The average decay in accuracy from the first generation after training to generation 9 was −0.13 and −0.19 for GT and FT, respectively. The persistence of accuracy improves with more data. Old data have a limited impact on the predictions for young animals for a trait with a large amount of information but a bigger impact for a trait with less information.