A general model of temporary aquatic habitat use: Water phenology as a life history filter

Temporary aquatic habitats are not widely appreciated fish habitat. However, fish navigate the transient waters of intertidal zones, floodplains, intermittent and ephemeral streams, lake margins, seasonally frozen lakes and streams, and anthropogenic aquatic habitats across the globe to access important resources. The selective pressures imposed by water impermanence (i.e., freezing, drying, tidal fluctuations), however, operate similarly across taxa and ecosystems. These similarities are formalized into a conceptual model relating habitat use to surface water phenology. Whereas all necessary life history functions (spawning, foraging, refuge, and dispersal) can be accomplished in temporary habitats, the timing, duration, and predictability of water act as a “life history filter” to which habitats can be used and for what purpose. Habitats wet from minutes to months may all be important—albeit in different ways, for different species. If life history needs co‐occur with accessibility, temporary habitats can contribute substantially to individual fitness, overall production and important metapopulation processes. This heuristic is intended to promote research, recognition and conservation of these frequently overlooked habitats that can be disproportionately important relative to their size or brevity of existence. There is a pressing need to quantify how use of temporary aquatic habitats translates to individual fitness benefits, population size and temporal stability, and ecosystem‐level consequences. Temporary aquatic habitats are being impacted at an alarming rate by anthropogenic activities altering their existence, phenology, and connectivity. It is timely that scientists, managers and policymakers consider the role these habitats play in global fish production.     

Effects of dietary protein and lipid level, and water temperature, on the post-feeding oxygen consumption of Atlantic cod and haddock

Tank respirometry was used to study the interactive effects of protein:lipid level (55%:11% vs. 42%:16%; both diets isoenergetic) and temperature (11, 6 and 2 °C) on the magnitude and duration of specific dynamic action (SDA) in juvenile Atlantic cod and haddock. The protein:lipid level did not affect any measured variable. However, numerous temperature and species effects were observed. For example, although the maximum post-feeding oxygen consumption (30–50% above routine metabolic rate; RMR) and SDA duration (∼55–85 h; SDA_DUR) were not affected by temperature, SDA_DUR g⁻¹ of food increased from 11 to 2 °C (from ∼3 to 12 h g food⁻¹). While absolute SDA (mg O₂) decreased by ∼60–65% in cod and ∼75% in haddock from 11 to 2 °C, due to a concomitant decrease in food consumption from ∼2.0% to 0.6% body mass, SDA comprised between 3.3% and 5.2% of the dietary energy content at all temperatures. Finally, RMR at 11 and 2 °C and SDA_DUR at 2 °C were 25–35% and 25% greater in cod, respectively, as compared with haddock. These results suggest that feeding reduced protein diets at low water temperatures is unlikely to improve the growth of these species.     

Review: Endophytic microbes and their potential applications in crop management

Endophytes are microbes (mostly bacteria and fungi) present asymptomatically in plants. Endophytic microbes are often functional in that they may carry nutrients from the soil into plants, modulate plant development, increase stress tolerance of plants, suppress virulence in pathogens, increase disease resistance in plants, and suppress development of competitor plant species. Endophytic microbes have been shown to: (i) obtain nutrients in soils and transfer nutrients to plants in the rhizophagy cycle and other nutrient‐transfer symbioses; (ii) increase plant growth and development; (iii) reduce oxidative stress of hosts; (iv) protect plants from disease; (v) deter feeding by herbivores; and (vi) suppress growth of competitor plant species. Because of the effective functions of endophytic microbes, we suggest that endophytic microbes may significantly reduce use of agrochemicals (fertilizers, fungicides, insecticides, and herbicides) in the cultivation of crop plants. The loss of endophytic microbes from crop plants during domestication and long‐term cultivation could be remedied by transfer of endophytes from wild relatives of crops to crop species. Increasing atmospheric carbon dioxide levels could reduce the efficiency of the rhizophagy cycle due to repression of reactive oxygen used to extract nutrients from microbes in roots. © 2019 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.     

Landscape patterns from mathematical morphology on maps with contagion

The perceived realism of simulated maps with contagion (spatial autocorrelation) has led to their use for comparing landscape pattern metrics and as habitat maps for modeling organism movement across landscapes. The objective of this study was to conduct a neutral model analysis of pattern metrics defined by morphological spatial pattern analysis (MSPA) on maps with contagion, with comparisons to phase transitions (abrupt changes) of patterns on simple random maps. Using MSPA, each focal class pixel on a neutral map was assigned to one of six pattern classes—core, edge, perforated, connector, branch, or islet—depending on MSPA rules for connectivity and edge width. As the density of the focal class (P) was increased on simple random maps, the proportions of pixels in different pattern classes exhibited two types of phase transitions at threshold densities (0.41 ≤ P ≤ 0.99) that were predicted by percolation theory after taking into account the MSPA rules for connectivity and edge width. While there was no evidence of phase transitions on maps with contagion, the general trends of pattern metrics in relation to P were similar to simple random maps. Using an index P for comparisons, the effect of increasing contagion was opposite that of increasing edge width.     

Waldverbreitung und Waldeigentum im deutschen Raumplanungsrecht

European Journal of Forest Research -     

Antioxidant 1 copper chaperone gene expression and copper levels in dog osteosarcoma patients

Twenty-four dogs with OS underwent limb amputation. Serum, OS tumour, and normal bone were harvested at time of surgery. RNA was extracted and gene expression was performed using quantitative polymerase chain reaction (qPCR). Tissue and blood copper concentrations were also determined with spectrophotometry. Compared to bone, tumour samples had significantly higher expressions of antioxidant 1 copper chaperone (ATOX1, p = .0003). OS tumour copper levels were significantly higher than that of serum (p < .010) and bone (p = .038). Similar to our previous observations in mouse and human OS, dog OS demonstrates overexpression of genes that regulate copper metabolism (ATOX1), and subsequent copper levels. Dogs with OS may provide a robust comparative oncology platform for the further study of these factors, as well as potential pharmacologic interventions.     

Horizontal movements,utilization distributions,and mixing rates of yellowfin tuna (Thunnus albacares) tagged and released with archival tags in six discrete areas of the eastern and central Pacific Ocean

A total of 1522 yellowfin tuna, Thunnus albacares, were captured, tagged, and released with surgically implanted archival tags (ATs), in six discrete areas of the eastern and central Pacific Ocean, during 2002 through 2019. Of 483 ATs returned (31.7%), 227 ATs from yellowfin (48–147 cm in fork length) at liberty from 32 to 1846 d ( = 300.1 d) provided suitable data sets which were processed using an unscented Kalman filter model with sea-surface temperature measurements integrated (UKFsst) in order to obtain most probable tracks and movement parameters. Although some differences were observed in the movement patterns for fish from within and among the six release areas, 99% of the 227 fish remained within 1000 M of their release locations, indicating limited dispersion and fidelity to release locations. The median movement parameter D, which defines dispersion from the UKFsst model, for the fish released in the offshore equatorial areas showed much greater dispersion rates compared to those for the fish released along the coast or around islands. The rates of mixing of yellowfin among the release areas were found to be dependent on the distances between release areas, with, in general, the greatest mixing occurring among areas in closest proximity, whereas for the two areas offshore Mexico and the two offshore equatorial areas, the rates of mixing were nonexistent or negligible.