Potato bacterial wilt in India caused by strains of phylotype I, II and IV of Ralstonia solanacearum

Bacterial wilt or brown rot is one of the most devastating diseases of potato caused by a bacterium Ralstonia solanacearum (Smith 1986) Yabuuchi et al. (Microbiol Immunol 39:897–904 1995). Traditionally, R. solanacearum is classified into five races (r) on the basis of differences in host range and six biovars (bvs) on the basis of biochemical properties. Recently using molecular methods, R.?solanacearum has been classified into phylotypes based on the intergenic transcribed sequence of the ribosomal RNA genes 16S and 23S and into sequevars based on the endoglucanase gene (egl) sequence. In the present study, 75 bacterial strains, isolated from wilt infected potatoes from various potato growing regions of India, were classified by traditional and molecular methods. The identity of all the strains was confirmed as R. solanacearum as expected single 280-bp fragment resulted in all the strains following PCR amplification using R. solanacearum specific universal primer pair 759/760. Biovar (bv) analysis, based on utilization of disaccharide sugars and hexose alcohols, categorised the 75 strains into bv2 (78.7 %), 2 T (5.3 %), 3 (5.3 %) and 4 (10.7 %). The phylotype specific multiplex PCR assigned 78.7 % strains to phylotype II, 16.0 % to phylotype I and 5.3 % to phylotype IV. Phylogenetic analysis of egl gene sequences clustered all fifty nine phylotype II (bv2) strains with reference strain IPO1609 (IIB-1), all four phylotype IV (bv2T) strains with reference strain MAFF301558 (IV-8), three phylotype I (bv3) strains with reference strain MAFF211479 (I-30) and all eight phylotype I (bv4) and one phylotype I (bv3) strain with reference strain CIP365 (I-45). The study concluded that the Indian potato strains of R. solanacearum belong to three out of four phylotypes namely: the Asian phylotype I, the American phylotype II, and the Indonesian phylotype IV. This is the first study to address the diversity of R. solanacearum from potato in India using phylotype and sequevar scheme. We also report here for the first time the occurrence of phylotype IV sequevar 8 (bv2T) strain of R. solanacearum causing potato bacterial wilt in mid hills of Meghalaya in India.     

Tubifex production using agro-industrial wastes and raw cattle dung

ABSTRACT

Tubifex (Tubifex tubifex) was cultured in captivity using three different wastes: rice mill sludge (RMS), dairy sludge (DS), and raw cattle dung (RCD). Three experiments were conducted: 10, 20, and 30 days. A total of 100 g of tubifex at 62.5 g m^?2 was inoculated in 1.6 m² fiberglass-reinforced plastic tanks. Comparing all production parameters, RMS > DS > RCD. Growth rate (g m^?2 d^?1) did not differ among durations. RMS- and DS-fed tubifex contained higher protein and fat than RCD-fed tubifex. Efficiency on production of g tubifex per kg of waste material was highest at 10 days, declining with time for all waste materials. This experiment suggests that RMS and DS are effective wastes for tubifex culture, with total production increasing with no reduction in growth rate through 30 days, but with efficiency declining after 10 days.     

Physiological and biochemical changes induced by accumulated mangiferin in Mangifera indica

Accumulation of mangiferin (1,3,6,7-tetrahydroxyxanthone-C₂-β-D-glucoside), a natural metabolite of Mangifera indica at the site of differentiating buds, influences the change from reproductive to vegetative growth. Mangiferin-induced physiological changes in M. indica have been studied and a link established between the metabolic deviations and the observed effects of mangiferin accumulation in healthy and malformed mango plants. Mangiferin in high concentration suppressed the activity of peroxidase, catalse, α-amylase and IAA-oxidase. Polyphenoloxidase and invertase showed increased activity. Mangiferin accumulation increased the rate of photosynthesis but lowered those of transpiration and respiration. Mangiferin treatment increased the contents of chlorophyll, carbohydrates, total nitrogen, protein nitrogen, nucleic acids (RNA and DNA) and indole-3yl-acetic acid (IAA).     

Effect of long-term application of fertilizers on soil quality and rice yield in a salt-affected coastal region of India

The studied soils were collected from a 24-year long-term fertilizer experiment with rice (Oryza sativa L.) grown on tropical Typic Endoaquepts during monsoon season only. The organic carbon (OC) and total nitrogen (TN) status of the soils improved with the N₁₀₀P₂₂K₄₂ treatment than the initial values at the start of the experiment. The available P status of the soils depleted in the N₁₀₀P₁₁K₂₂ and N₀P₀K₀ treatments than the initial value. Soil microbial biomass carbon (MBC) and basal soil respiration (BSR), activities of urease, acid and alkaline phosphatases as well as fluorescein diacetate hydrolyzing activity (FDHA) were the highest in the N₁₀₀P₂₂K₄₂ treatment. The highest percentage of MBC in OC in the N₁₀₀P₂₂K₄₂ treatment revealed the accumulation of organic matter with an overall improvement in nutrient status of soil, since MBC is a labile pool of plant nutrients. Long-term application of fertilizers (N₁₀₀P₂₂K₄₂) had no deleterious effect on microbial and biochemical soil quality parameters. Rice grain yields were inconsistent with N₁₀₀P₀K₀ and N₀P₀K₀ while that of N₁₀₀P₂₂K₄₂, N₁₀₀P₁₁K₂₂ and N₁₀₀P₂₂K₀ increased gradually during the course of the experiment for each block period of six years. The grain yield of rice showed high significant correlation with the microbial and biochemical soil parameters.     

Potato apical leaf curl disease: current status and perspectives on a disease caused by tomato leaf curl New Delhi virus

Journal of Plant Diseases and Protection - Potato apical leaf curl disease (PALCD) caused by a unique bipartite virus [tomato leaf curl New Delhi virus (ToLCNDV)] has emerged as a global threat....     

Recombinase Polymerase Amplification assay for rapid detection of a geminivirus associated with potato apical leaf curl disease

Journal of Plant Diseases and Protection - Recombinase Polymerase Amplification (RPA) assay was developed for specific detection of Tomato leaf curl New Delhi virus-potato (ToLCNDV [potato]),...     

Fingerprinting Indian potato cultivars by random amplified polymorphic DNA (RAPD) markers

Summary Random amplified polymorphic DNA markers were used to distinguish and characterize 20 Indian potato cultivars. A total of 198 scorable fragments were amplified using 10 random primers, only two of which were monomorphic. Similarity values among the cultivars ranged from 0.33 to 0.80. A primer having resolving power above 7.4 was sufficient to distinguish all 20 cultivars. Wide variations in band profiles were observed when the same template DNA was amplified using Taq DNA polymerase from four different sources. No significant difference in profile complexity was observed at 40°C annealing temperature with a primer having 70% GC content. Prior restriction of template DNA resulted in band profiles whose complexity was similar to or higher than that of unrestricted template. However, multiplex RAPD with cleaved template DNA could not increase fingerprint complexity. Publication No. 1666, CPRI. Shimla     

Effects of manganese deficiency on soluble apoplastic peroxidase activities and lignin content in needles of Norway spruce (Picea abies)

Apoplastic peroxidase activities were investigated in manganese-deficient and manganese-sufficient needles of field-grown Norway spruce trees (Picea abies L.). In Mn-sufficient needles, two sets of peroxidases, one with an alkaline pI >/= 9 and another with an acidic pI 相似文献   

Degradation of Monoethanolamine in Aqueous Solution by Fenton’s Reagent with Biological Post-treatment

Alkanolamines in the wastewater from gas treating plants are not readily biodegradable. In this work, we have investigated the effectiveness of the Fenton’s reagent (H₂O₂-Fe²⁺) to treat monoethanolamine (MEA) as a model compound in simulated wastewater. Degradation studies were carried out in a jacketed glass reactor. The effects of concentrations of ferrous sulfate, hydrogen peroxide, and the pH of a solution on the rate of reaction were determined. A pH of 3 was found to be the optimum. The degradation reaction proceeds very fast at the beginning but slows down significantly at a longer time. A larger fractional degradation of the organics in solution was observed if the initial chemical oxygen demand (COD) of the feed solution was high. Gradual addition of H₂O₂ to the reaction mixture increased the COD removal by about 60% compared to one-time addition of the reagent at the beginning of the process. A rate equation for mineralization of the amine was developed on the basis of a simplified mechanistic model, and the lumped value of the rate constant for COD removal was determined. A partially degraded MEA solution as well as “pure” MEA was subjected to biological oxidation by activated sludge. The former substrate degraded much faster. The degradation rate and biomass generation data could be fitted by the Monod kinetic equations.