Livestock grazing, plateau pikas and the conservation of avian biodiversity on the Tibetan plateau

On the Qinghai-Tibet plateau increased livestock numbers have resulted in degradation of the grasslands with potential impacts on native biodiversity. Concurrently, perceived increases in populations of native small mammals such as plateau pikas (Ochotona curzoniae) have led to poisoning programs, with uncertain impacts on species such as ground-nesting birds. We explored the relationships between the local seasonal abundance of small birds and (1) the density of pika burrows; (2) livestock grazing practices; and (3) local poisoning of pikas. Around Naqu prefecture, central Tibet, we used a nested experimental design to collect data from areas rested from grazing over summer, nearby areas with year-round grazing and areas subjected to pika poisoning. Additional data were collected from a site where grazing had not occurred for at least 4 years prior to the study. Poisoning pikas in spring had no detectable effect on the local abundance of birds the following autumn. However, two ground-nesting species, white-rumped and rufous-necked snowfinches, showed positive associations with the density of pika burrows, indicating that long-term pika poisoning could reduce the density of these species by reducing the density of pika burrows. Rufous-necked snowfinches and non ground-nesting species including horned larks and common hoopoes showed positive responses to reduced grazing pressure from livestock, particularly in the long-rested site, indicating current grazing levels could be having a negative impact on these species. Conservation of small passerine biodiversity in this system will require changed management practices for livestock and pikas that consider the complex three-way interaction between livestock grazing, pikas and small birds.     

Mercury Sedimentation in Lakes in Western Whatcom County, Washington, USA and its Relation to Local Industrial and Municipal Atmospheric Sources

Concentrations of mercury (Hg) were measured in six dated cores from four lakes in western Whatcom County, Washington, USA, that were at various bearings from a chlor-alkali plant, two municipal waste incinerators and a municipal sewage sludge incinerator. The importance of atmospheric emissions of Hg from these local municipal and industrial sources was evaluating by comparing the temporal trends in sedimentation of the lake cores with the emission history of each Hg species and by examining the geographical distribution of Hg sedimentation in relation to the region’s primary wind pattern. Local municipal and industrial sources of atmospheric Hg were not responsible for the majority of the Hg in the upper layer of sediments of Whatcom County lakes because of (1) the significant enrichment of Hg in lake sediments prior to emissions of local industrial and municipal sources in 1964, (2) smaller increases in Hg concentrations occurred after 1964, (3) the similarity of maximum enrichments found in Whatcom County lakes to those in rural lakes around the world, (4) the inconsistency of the temporal trends in Hg sedimentation with the local emission history, and (5) the inconsistency of the geographic trends in Hg sedimentation with estimated deposition. Maximum enrichment ratios of Hg in lake sediments between 2 and 3 that are similar to rural areas in Alaska, Minnesota, and New England suggest that global sources of Hg were primarily responsible for increases of Hg in Whatcom County lakes beginning about 1900.     

Dietary intake and development of a quantitative food-frequency questionnaire for a lifestyle intervention to reduce the risk of chronic diseases in Canadian First Nations in north-western Ontario

OBJECTIVES: To characterise the diet of First Nations in north-western Ontario, highlight foods for a lifestyle intervention and develop a quantitative food-frequency questionnaire (QFFQ). DESIGN: Cross-sectional survey using single 24 h dietary recalls. SETTING: Eight remote and semi-remote First Nations reserves in north-western Ontario. SUBJECTS: 129 First Nations (Oji-Cree and Ojibway) men and women aged between 18 and 80 years. RESULTS: The greatest contributors to energy were breads, pasta dishes and chips (contributing over 20 % to total energy intake). 'Added fats' such as butter and margarine added to breads and vegetables made up the single largest source of total fat intake (8.4 %). The largest contributors to sugar were sugar itself, soda and other sweetened beverages (contributing over 45 % combined). The mean number of servings consumed of fruits, vegetables and dairy products were much lower than recommended. The mean daily meat intake was more than twice that recommended. A 119-item QFFQ was developed including seven bread items, five soups or stews, 24 meat- or fish-based dishes, eight rice or pasta dishes, nine fruits and 14 vegetables. Frequency of consumption was assessed by eight categories ranging from 'Never or less than one time in one month' to 'two or more times a day'. CONCLUSION:We were able to highlight foods for intervention to improve dietary intake based on the major sources of energy, fat and sugar and the low consumption of fruit and vegetable items. The QFFQ is being used to evaluate a diet and lifestyle intervention in First Nations in north-western Ontario.     

Genotypic differences in shoot silicon concentration and the impact on grain arsenic concentration in rice

Silicon in rice (Oryza sativa L.) has been demonstrated to be involved in resistance to lodging, drought, and salinity, and also enhances resistance to pests and diseases. The aim of this study was to determine the range of silicon concentration in a set of rice (Oryza sativa L.) accessions, and to determine if the natural variation of shoot silicon is linked to the previously identified silicon transporters (Lsi genes). Silicon concentration was determined in 50 field‐grown accessions, representing all sub‐populations of rice, with all accessions being genotyped with 700K SNPs. SNPs within 10 kb of the Lsi genes were examined to determine if any were significantly linked with the phenotypic variation. An XRF method of silicon determination compared favourably with digestion and colorimetric analysis. There were significant genotypic differences in shoot silicon ranging from 16.5 to 42.4 mg g^?1 of plant dry weight, but there was no significant difference between the rice sub‐populations. Plants with different alleles for SNPs representing Lsi2 and Lsi3 were significantly different for shoot silicon concentration. Shoot silicon correlated negatively with grain arsenic in the tropical and temperate japonica sub‐population, suggesting that accessions with high shoot silicon have reduced grain arsenic. This study indicates that alleles for Lsi genes are excellent candidate genes for further study to explain the natural variation of shoot silicon in rice.     

Biodegradation of biodiesel and toluene under nitrate-reducing conditions and the impact on bacterial community structure

Purpose

Biodiesel is a renewable fuel that can be mixed with toluene and be accidentally released into anoxic ecosystems and impact soil microbial communities. Therefore, the aim of the present work was to examine, under nitrate-reduction conditions, the biodegradation of toluene in the presence of two different types of biodiesel (sunflower and rapeseed), and their impact on the bacterial community structure.

Materials and methods

Sediment samples were spiked individually with toluene, biodiesel, and their blends in laboratory-designed microcosms. Sunflower oil biodiesel was produced in the laboratory, while rapeseed oil biodiesel was a commercial product. Degradation of biodiesels and blends was monitored by directly measuring the substrate or indirectly by determining nitrate removal during the course of the experiment. Denitrification rates were estimated with the acetylene inhibition technique. Denaturing gradient gel electrophoresis was used to assess impacts on the bacterial community structure exposed to biodiesels, blends, and toluene.

Results and discussion

The results of this study showed that toluene and biodiesel were completely degraded within 10 days. Biodiesel significantly affected the bacterial community structure at a similar magnitude, independently of its origin. Additionally, toluene impacted the bacterial community and denitrification process to a lower extent than biodiesel and a clear decrease in the relative bacterial richness and diversity was shown in samples with biodiesel and blends. To the best of our knowledge, this is one of the first reports describing degradation of biodiesel alone and blends under nitrate-reducing conditions, and also the effects of these compounds on the denitrification process. In addition, due to the recently discovered “oxygenic denitrification” process, the acetylene inhibition technique and nitrous oxide quantification may not be the most adequate tool to estimate denitrification rates. Further detailed studies are advised to understand whether the identified bacterial community shift impacts ecosystem functions.

Conclusions

Our results help to understand the biodegradation of toluene, biodiesel, and their blends in sediments under nitrate-reducing conditions and might be important in implementing bioremediation strategies in anoxic environments.

     

The Alliance for Freshwater Life: A global call to unite efforts for freshwater biodiversity science and conservation

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Ecosystem modelling to quantify the impact of historical whaling on Southern Hemisphere baleen whales

Many baleen whales were commercially harvested during the 20th century almost to extinction. Reliable assessments of how this mass depletion impacted whale populations, and projections of their recovery, are crucial but there are uncertainties regarding the status of Southern Hemisphere whale populations. We developed a Southern Hemisphere spatial “Model of Intermediate Complexity for Ecosystem Assessments” (MICE) for phytoplankton, krill (Euphausia superba) and five baleen whale species, to estimate whale population trajectories from 1890 to present. To forward project to 2100, we couple the predator–prey model to a global climate model. We used the most up to date catch records, fitted to survey data and accounted for key uncertainties. We predict Antarctic blue (Balaenoptera musculus intermedia), fin (Balaenoptera physalus) and southern right (Eubalaena australis) whales will be at less than half their pre‐exploitation numbers (K) even given 100 years of future protection from whaling, because of slow growth rates. Some species have benefited greatly from cessation of harvesting, particularly humpbacks (Megaptera novaeangliae), currently at 32% of K, with full recovery predicted by 2050. We highlight spatial differences in the recovery of whale species between oceanic areas, with current estimates of Atlantic/Indian area blue (1,890, <1% of K) and fin (16,950, <4% of K) whales suggesting slower recovery from harvesting, whilst Pacific southern right numbers are <7% of K (2,680). Antarctic minke (Balaenoptera bonaerensis) population trajectories track future expected increases in primary productivity. Population estimates and plausible future predicted trajectories for Southern Hemisphere baleen whales are key requirements for management and conservation.     

Cold hardiness and transplant response of Juglans nigra seedlings subjected to alternative storage regimes

? Effects of overwinter storage regimes on seedling cold hardiness and physiological vigor are relatively unexplored, particularly for temperate deciduous forest tree species.

? We evaluated influence of storage duration (0, 66, 119, or 175 d) on electrolyte leakage of stem and root collar tissues following exposure to a series of freeze-test temperatures in black walnut (Juglans nigra L.) seedlings sampled from cold (3 °C) or freezer (?2 °C) storage. Seedlings were subsequently transplanted into a controlled growth chamber environment for two months.

? Regardless of storage temperature, mean LT₅₀ was lowest for seedlings stored for 66 d (≤ ?34 °C) and increased dramatically after 119 d (≥ ?13 °C).

? Root collar tissue had lower LT₅₀ than stem tissue after 119 d for cold-stored seedlings, reflecting importance of evaluative tissue type. Days to bud break shortened with increasing storage duration up to 119 d and stabilized thereafter for both storage regimes. Root growth potential was maximized after 119 d of storage, and subsequently declined for cold-stored seedlings. Height growth increased following storage, regardless of duration.

? To promote stress resistance and transplant growth response, we recommend that black walnut seedlings from this genetic source be outplanted after approximately 66–119 d of storage.

     

Spatial distribution and influence of large woody debris in an old-growth forest river system, New Zealand

A field survey was undertaken to determine the quantity, spatial distribution and influence of large woody debris (LWD) in a fifth-order river system in old-growth forest in New Zealand. LWD attributes were assessed at 25 sites distributed in the headwaters and along the main stem of the Whirinaki River system (73 km²). LWD volume, number of pieces, piece length and piece size, were positively correlated with bankfull width, whereas the number of pieces/unit area, LWD/unit area, number of pieces suspended across the channel and LWD influence on channel morphology, were negatively correlated. Pieces influencing channel morphology were larger, longer and more stable than average. We identified four key zones in the river system based on LWD spatial distribution patterns and influence on habitat complexity. Zonal boundaries occurred where there were changes in the transport capacity, fluvial processes, channel width and geomorphic structure of the channel. The results of this study highlight the need to understand the characteristics, spatial distribution patterns and influence of LWD at the catchment level when undertaking protective, management or rehabilitation programmes in forested river ecosystems.