Characterization of resistance to the wheat stem sawfly in spring wheat landrace accessions from targeted geographic regions of the world

Plant landraces have long been recognized as potential gene pools for biotic and abiotic stress-related genes. This research used spring wheat landrace accessions to identify new sources of resistance to the wheat stem sawfly (WSS) (Cephus cinctus Norton), an important insect pest of wheat in the northern Great Plains of North America. Screening efforts targeted 1409 accessions from six geographical areas of the world where other species of grain sawflies are endemic or where a high frequency of accessions possesses the resistance characteristic of solid stems. Resistance was observed in approximately 14% of accessions. Half of the lines displayed both antixenosis and antibiosis types of resistance. Among the resistant accessions, 41% had solid or semi-solid stems. Molecular genetic screening for haplotypes at the solid stem QTL, Qss.msub.3BL, showed that 15% of lines shared the haplotype derived from ‘S-615’, the original donor of the solid stem trait to North American germplasm. Other haplotypes associated with solid stems were also observed. Haplotype diversity was greater in the center of origin of wheat. Evaluation of a representative set of resistant landrace accessions in replicated field trials at four locations over a three year period identified accessions with potential genes for reduced WSS infestation, increased WSS mortality, and increased indirect defense via parasitoids. Exploitation of distinct types of plant defense will expand the genetic diversity for WSS resistance currently present in elite breeding lines.     

Development of male-specific markers and identification of sex reversal mutants in papaya

Papaya is a productive and nutritious fruit grown in tropical and sub-tropical regions worldwide. It is polygamous with three sex types: female, male and hermaphrodite. Sex determination in papaya is controlled by an XY sex chromosome system with two slightly different Y chromosomes, Y for males and Y^h for hermaphrodites. Comparative analysis of the hermaphrodite-specific region of Y^h chromosome (HSY) and male-specific region of Y chromosome (MSY) revealed 99.6% sequence identity, which explains why DNA markers that amplify for both males and hermaphrodites have easily been developed, but not for the male trait specifically. We examined the 0.4% sequence differences, and found 1887 indels and 21,088 SNPs between MSY and HSY. The vast majority of indels are single nucleotide or few base pairs. A large male-specific retrotransposon insertion of 8396 bp was used to develop two papaya male-specific markers, PMSM1 and PMSM2 that amplify 585 and 548 bp fragments, respectively. These two markers were tested in 11 gynodioecious and four dioecious varieties along with autosomal DNA marker 71E and male/hermaphrodite marker W11, and the results showed clear separation of male from hermaphrodite and female. PMSM1 and PMSM2 were also used to test the sex type of six sex male-to-hermaphrodite reversal mutants which are crucial materials for validating candidate genes for sex determination in papaya. Our result showed all six mutants were positive for the male-specific markers. These male-specific markers can be used to distinguish gynodioecious and dioecious cultivars in papaya seed market, and facilitate genetic and genomic research for papaya improvement.     

Evaluation of Low‐protein Alternative Diets for Pond‐raised Hybrid Catfish,Ictalurus punctatus × Ictalurus furcatus

A study was conducted to evaluate low‐protein traditional or alternative diets for pond‐raised hybrid catfish, Ictalurus punctatus × Ictalurus furcatus. Three 24% protein diets containing decreasing levels of soybean meal (30, 20, and 15%) and increasing levels of cottonseed meal and corn germ meal were compared with a 28% protein control diet. Hybrid catfish fingerlings (mean initial weight = 71 g/fish) were stocked into 20 earthen ponds (0.04 ha) at a density of 14,826 fish/ha with five ponds per dietary treatment. Fish were fed once daily to apparent satiation for a 191‐d growing season. There were no significant differences in total diet fed, net yield, weight gain, feed conversion ratio (FCR), survival, or fillet proximate nutrient composition among dietary treatments (P ≥ 0.10). However, regression analysis showed for fish fed 24% protein diets there was a linear increase in FCR as soybean meal levels decreased (P = 0.06). Compared with fish fed the 28% protein control diet, fish fed 24% protein diets had lower carcass and fillet yield. Results demonstrate a 24% protein alternative diet containing 20% soybean meal may be substituted for 28% protein diets for hybrid catfish during food fish production.     

Evidence for long-term prevalence of cucumber vein yellowing virus in Sudan and genetic variation of the virus in Sudan and the Mediterranean Basin

Cucumber vein yellowing virus (CVYV) is emerging throughout the Mediterranean Basin, where it causes significant damage to cucumber and melon crops. It has been suggested that CVYV originated from the Middle East and has spread only recently to other areas. In this work, an isolate from Sudan was characterized, and surveys performed in that country between 1992 and 2012 revealed a long-term presence of CVYV with a high molecular variability, showing that the virus has long been endemic in sub-Saharan Africa. Comparison of the full-length sequences of 11 CVYV isolates from different geographic origins revealed recombination events in CVYV populations from the Mediterranean Basin and the Middle East, and evidence for different selection pressures along the genome. These results shed a new light on the evolution of CVYV.     

First report of Thrips setosus in Belgium

The Japanese flower thrips, Thrips setosus, is a polyphagous insect which in Europe has mainly been observed on hydrangeas (Hydrangea spp.). The first report of T. setosus in the EPPO region was in the Netherlands (2014). Since then it has been observed in four other countries inside the EPPO region: Germany (2015), the United Kingdom (2016), France (2016) and Croatia (2016). Its dispersal is most likely to be related to trade. Because of its polyphagous nature, there is a risk of spread to other economically important crops. Therefore, T. setosus was included in the national survey project ‘STATREGO’, during which the status of several invasive plant pests and diseases in Belgium was determined.     

Association mapping reveals loci associated with multiple traits that affect grain yield and adaptation in soft winter wheat

Genome-wide association studies (GWAS) are useful to facilitate crop improvement via enhanced knowledge of marker-trait associations (MTA). A GWAS for grain yield (GY), yield components, and agronomic traits was conducted using a diverse panel of 239 soft red winter wheat (Triticum aestivum) genotypes evaluated across two growing seasons and eight site-years. Analysis of variance showed significant environment, genotype, and genotype-by-environment effects for GY and yield components. Narrow sense heritability of GY (h ²  = 0.48) was moderate compared to other traits including plant height (h ²  = 0.81) and kernel weight (h ²  = 0.77). There were 112 significant MTA (p < 0.0005) detected for eight measured traits using compressed mixed linear models and 5715 single nucleotide polymorphism markers. MTA for GY and agronomic traits coincided with previously reported QTL for winter and spring wheat. Highly significant MTA for GY showed an overall negative allelic effect for the minor allele, indicating selection against these alleles by breeders. Markers associated with multiple traits observed on chromosomes 1A, 2D, 3B, and 4B with positive minor effects serve as potential targets for marker assisted breeding to select for improvement of GY and related traits. Following marker validation, these multi-trait loci have the potential to be utilized for MAS to improve GY and adaptation of soft red winter wheat.     

Effect Of Replacing Fish Meal With Blood Meal On Chemical Composition Of Supplement For Nile Tilapia (Oreochromis Niloticus)

The objective of the work was to evaluate the effect on the nutrient content of replacing fish meal (FM) with blood meal (BM) in fish supplement. Three isonitrogenous diets (35% crude protein) were formulated using FM as the main source of animal protein (BM0); 50% replacement of FM with blood meal (BM50); or 100% replacement of FM with BM (BM100). The chemical composition (ash, crude protein, crude fat and crude fibre) and amino acid composition were determined. Replacement of FM with BM did not affect the proximate composition of the diet apart from ash content which decreased with the level of substitution. Substituting fish meal with blood meal reduced the levels of methionine, lysine, isoleucine, leucine, proline, valine and increased the levels of arginine, phenylanine and alanine in the diet. Amino acid indices revealed that BM0 had more amino acids with the highest chemical scores followed by BM50 and BM100. In all the diets, methionine was the most limiting amino acid. The essential amino acid index of the diets reduced with the level of replacement of FM (0.94, 0.88 and 0.77). The study showed substitution of up to 50% FM with BM gave a useful protein diet and 100% gave almost a poor protein diet.