Mutagenesis, heterogeneous gene expression, and purification and amino acid substitution analyses of plant peroxidase, PrxA3a

We introduced mutations into prxA3a, a peroxidase gene of hybrid aspen, Populus kitakamiensis, to substitute the amino acid residues at the surface of the protein, and analyzed substrate specificities. PrxA3a and mutated enzymes heterogeneously gene expressed in Saccharomyces cerevisiae were purified by Ni affinity chromatography, hydrolysis of sugar chain (Endoglycosidase H_f) and gel filtration. The substrate specificities were altered by substituted amino acid residues. PrxA3a F77Y A165W acquired the substrate specificity to m-chlorophenol. PrxA3a F77Y and PrxA3a F77YA165W could polymerize sinapyl alcohol. In addition, PrxA3a A165W, F77Y, and F77YA165W improved cytochrome c oxidizing activity. These substituted amino acid residues should function as a catalytic site outside of the heme pocket.     

Measurement of suspended sediment for model experiments using general-purpose optical sensors

A specialized measurement system for measuring suspended sediment concentration in model experiments was developed; it utilizes general-purpose optical sensors to perform measurements. A photoelectric sensor was used for measuring the transmitted light, and a fiber optic sensor was used for measuring the backscattered light. The values of the light absorbance and intensity of backscattered light for turbid standard solutions measured with these sensors show a linear relationship with the turbidity. The calibration lines for sand particles with a large settling velocity were established by using a calibration tank containing upwelling water. The vertical profiles of the sediment concentration measured with the photoelectric sensor corresponded well to those of the sediment concentration measured with a water sampler in an artificial channel. This result suggests that the measurement system using a photoelectric sensor functions satisfactorily. The sediment concentrations measured using the fiber optic sensor correlate well with the concentrations measured through siphon sampling; however, the values measured with the fiber optic sensor are approximately 25% larger than those measured with the siphon. This disagreement may result from the differences in the optical conditions between the calibration tank and the actual channel. Thus, it may be possible to utilize fiber optic sensors calibrated on the basis of siphon sampling for the measurement of sediment concentration.     

Effect of calf death loss on cloned cattle herd derived from somatic cell nuclear transfer: Clones with congenital defects would be removed by the death loss

To increase public understanding on cloned cattle derived from somatic cell nuclear transfer (SCNT), the present review describes the effect of calf death loss on an SCNT cattle herd. The incidence of death loss in SCNT cattle surviving more than 200 days reached the same level as that in conventionally bred cattle. This process could be considered as removal of SCNT cattle with congenital defects caused by calf death loss. As a result of comparative studies of SCNT cattle and conventionally bred cattle, the substantial equivalences in animal health status, milk and meat productive performance have been confirmed. Both sexes of SCNT cattle surviving to adulthood were fertile and their reproductive performance, including efficiency of progeny production, was the same as that in conventionally bred cattle. The presence of substantial equivalence between their progeny and conventionally bred cattle also existed. Despite these scientific findings, the commercial use of food products derived from SCNT cattle and their progeny has not been allowed by governments for reasons including the lack of public acceptance of these products and the low efficiency of animal SCNT. To overcome this situation, communication of the low risk of SCNT technology and research to improve SCNT efficiency are required.     

Immediate and subsequent effects of drying and rewetting on microbial biomass in a paddy soil

Many surface soils in Japan may experience more frequent and intense drying–rewetting (DRW) events due to future climate changes. Such DRW events negatively and positively affect microbial biomass carbon (MBC) through microbial stress and substrate supply mechanisms, respectively. To assess the MBC immediately after DRW and during the incubation with repeated DRW cycles, two laboratory experiments were conducted for a paddy soil. In the first experiment, we exposed the soil to different drying treatments and examined the MBC and hourly respiration rates immediately after the rewetting to evaluate the microbial stress. In the second experiment, we compared microbial growth rates during the incubation of the partially sterilized soil with a continuously moist condition and repeated DRW cycles to evaluate the contribution of the substrate supply from non-biomass soil organic C on MBC. First, all drying treatments caused a reduction in MBC immediately after the rewetting, and higher drying intensities induced higher reduction rates in MBC. A reduction of more than 20% in MBC induced the C-saturated conditions for surviving microbes because sufficient concentrations of labile substrate C were released from the dead MBC. Second, repeated DRW cycles caused increases in the microbial growth rates because substrate C was supplied from non-biomass organic C. In conclusion, MBC decreased immediately after DRW due to microbial stress, whereas MBC increased during repeated DRW cycles due to substrate C supplied from non-biomass organic C.     

Influence of organic components and inorganic components of reed as a concrete admixture

Paddy and Water Environment - Vegetation in closed water area improves the natural environment by providing a habitat for juvenile shellfish and fish and by facilitating the intake of nutrients by...     

Factors controlling mineralization of soil organic matter in the Eurasian steppe

To understand the dynamics of soil organic matter (SOM) in the Eurasian steppe, several soil and meteorological properties were tested in order to estimate the amounts of potentially mineralizable organic carbon (PMC) and nitrogen (PMN). Total 41 surface soil samples were collected in Ukraine and Kazakhstan from cropland, forest, grassland, and desert ecosystems. The fresh soils were incubated for 133 days under constant temperature and moisture conditions, and the CO₂ emissions and the mineral N from the soils were monitored. PMC and PMN were determined by fitting models to the cumulative curves of the CO₂ and the mineral N. Tested soil properties included soil pH, sand, silt and clay contents, carbon and nitrogen contents of light fraction (LF, <1.6 g cm^?3) and heavy fraction (HF), and C/N ratio of LF and HF. The meteorological properties considered were mean annual temperature and precipitation. Using multiple regression analysis with the stepwise method, PMC was well estimated by carbon content of LF (LFC) and clay content, compared to the simple correlation with organic carbon (OC). Similarly, PMN was better determined by nitrogen content of LF (LFN) and clay content. These results suggest the partially labile nature of clay-associating OM and of LFC and LFN. The higher PMC and PMN in the forest and grassland sites would be attributed to the higher LFC and LFN, while the lower LFC and LFN in cropland sites would suggest the relatively higher contribution of clay-associating OM to PMC and PMN.     

Health status and productive performance of somatic cell cloned cattle and their offspring produced in Japan

Since the first somatic cell cloned calves were born in Japan in 1998, more than 500 cloned cattle have been produced by somatic cell nuclear transfer and many studies concerning cloned cattle and their offspring have been conducted in this country. However, most of the results have been published in Japanese; thus, the data produced in this country is not well utilized by researchers throughout the world. This article reviews the 65 reports produced by Japanese researchers (62 written in Japanese and 3 written in English), which employed 171 clones and 32 offspring, and categorizes them according to the following 7 categories: (1) genetic similarities and muzzle prints, (2) hematology and clinical chemistry findings, (3) pathology, (4) growth performance, (5) reproductive performance, (6) meat production performance and (7) milk production performance. No remarkable differences in health status or reproductive performance were found among conventionally bred cattle, somatic cell cloned cattle surviving to adulthood and offspring of somatic cell cloned cattle. Similarities in growth performance and meat quality were observed between nuclear donor cattle and their clones. The growth curves of the offspring resembled those of their full siblings.     

Effect of Low-Dose Human Interferon-alpha on Shipping Fever of Thoroughbred Racehorses

To assess the effect of human interferon-alpha (IFNα) on shipping fever of Thoroughbred racehorses subjected to long-distance transportation, an IFNα preparation was orally administered to 48 horses three times (once daily, 3 successive days) before transportation (IFNα group). In the control group (25 horses), maltose was administered in the same way. These treatments induced no abnormal findings in Thoroughbred racehorses before transportation. Immediately after transportation, significant increases in rectal temperature were observed in both treatment groups, whereas the rectal temperature of the IFNα group tended to be lower than that of the control group. Although WBC, Fbg, and SAA immediately after transportation were significantly increased due to transportation in both groups, the extent of the increases in the IFNα group was significantly smaller than in the control group. Long-distance transportation had a relatively profound impact on Thoroughbred racehorses, which was mitigated by IFNα treatment.     

Changes in volatile compounds of living Pacific oyster Crassostrea gigas during air-exposed storage

Fisheries Science - The changes in volatile compounds of living oysters Crassostrea gigas with shells under air-exposed storage for 7&nbsp;days at 5 and 20&nbsp;°C were investigated...