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41.
42.
Robin A Atherton Bennet J McComish Lara D Shepherd Lorraine A Berry Nick W Albert Peter J Lockhart 《Plant methods》2010,6(1):22
Background
Complete chloroplast genome sequences provide a valuable source of molecular markers for studies in molecular ecology and evolution of plants. To obtain complete genome sequences, recent studies have made use of the polymerase chain reaction to amplify overlapping fragments from conserved gene loci. However, this approach is time consuming and can be more difficult to implement where gene organisation differs among plants. An alternative approach is to first isolate chloroplasts and then use the capacity of high-throughput sequencing to obtain complete genome sequences. We report our findings from studies of the latter approach, which used a simple chloroplast isolation procedure, multiply-primed rolling circle amplification of chloroplast DNA, Illumina Genome Analyzer II sequencing, and de novo assembly of paired-end sequence reads. 相似文献43.
A new, multi-scaled graph visualization approach: an example within the playa wetland network of the Great Plains 总被引:1,自引:1,他引:0
We employed a sliding-window approach at multiple scales (window sizes and dispersal distances) to calculate seven standard graph-theoretical metrics within a subset of a large, freshwater wetland network. In contrast to most graph analyses, which quantify connectivity at a single (global) scale or at a patch-level scale, a multi-scaled, sliding-window approach provides an assessment that bridges these two approaches to examine patch clusters. As a case study we focused on a subset of a habitat patch network in a ~20,000 km2 area encompassing 2,782 playa wetlands in the panhandle of Texas. Playas are seasonal wetlands of the southern Great Plains of North America that form a network of regional habitat resources for wildlife. The large size of this network meant that global metrics failed to capture localized properties, so we used contour mapping to visualize continuous surfaces as functions of playa density, linkage density, and other topological traits at different window sizes and dispersal distances. This technique revealed spatial patterns in the components (i.e., the network properties of regions of the landscape at a given dispersal scale), with the spatial scale of habitat clustering varying with the size of the sliding window and dispersal distance. Using a tool familiar to landscape ecology (sliding-window methodology) in a novel way (to examine ecological networks at multiple scales), our approach provides a way to represent ecologically determined local-scale graph properties and illustrates how a multi-scaled approach is useful in examining habitat connectivity to investigate graph properties. 相似文献
44.
Lipid mobilization and inflammatory responses during the transition period of dairy cows 总被引:1,自引:0,他引:1
Contreras GA Sordillo LM 《Comparative immunology, microbiology and infectious diseases》2011,34(3):281-289
The transition period of dairy cattle is characterized by dramatic changes in metabolism and host defense mechanisms that are associated with increased disease. Intense lipid mobilization from tissue stores is an important metabolic adaptation during the transition period that results in significant release of non-esterified fatty acids (NEFA) into the blood stream. Whereas these fatty acids are important sources of energy during times of increased metabolic demands, elevated concentrations of NEFA are known to disrupt several immune and inflammatory functions. This review will discuss the implications of lipid mobilization on inflammatory responses with special emphasis on leukocytes and endothelial cell functions during the transition period of dairy cows. 相似文献
45.
Acke E Carroll C O'Leary A McGill K Kelly L Lawlor A Madden RH Moran L Scates P McNamara E Moore JE Jones BR Fanning S Whyte P 《Irish veterinary journal》2011,64(1):6-4
The genetic similarity of Campylobacter jejuni isolates from pets, compared to human clinical cases and retail food isolates collected in Ireland over 2001-2006 was investigated by cluster analysis of pulsed-field gel electrophoresis (PFGE) fingerprinting profiles. Comparison of the PFGE profiles of 60 pet isolates and 109 human isolates revealed that seven (4.1%) profiles were grouped in clusters including at least one human and one pet C. jejuni isolate. In total six (1.6%) of 60 pet and 310 food profiles were in clusters with at least one food and one pet C. jejuni isolate. The detection of only a small number of genetically indistinguishable isolates by PFGE profile cluster analysis from pets and from humans with enteritis in this study suggests that pets are unlikely to be an important reservoir for human campylobacteriosis in Ireland. However, genetically indistinguishable isolates were detected and C. jejuni from pets may circulate and may contribute to clinical infections in humans. In addition, contaminated food fed to pets may be a potential source of Campylobacter infection in pets, which may subsequently pose a risk to humans. 相似文献
46.
Coliform mastitis may be severe in periparturient cows due to enhanced expression of pro-inflammatory cytokines that contribute to disease pathogenesis. Tumor necrosis factor (TNF)-α is implicated with the severity of coliform mastitis by provoking inflammatory responses in affected tissues. The endothelium is an integral organ in regulating inflammatory responses and loss of endothelial integrity may be fatal. Studies in humans suggest that endothelial cell apoptosis may be a consequence of TNF-α exposure and contributes to the development of sepsis, however, its impact on bovine mammary endothelial cells (BMEC) is unknown. We sought to determine the inflammatory and apoptotic responses of primary BMEC exposed to TNF-α in vitro. Stimulation of endothelial monolayers with TNF-α resulted in significant increase of toll-like receptor 4, interleukin-6 and -8, and intercellular adhesion molecule-1 and vascular cellular adhesion molecule-1 gene expression in a time-dependent manner. Caspase-8 and caspase-3 mRNA expression, as well as caspase enzyme activity, also increased significantly following TNF-α stimulation. Cell viability assessed by ATP activity and BMEC apoptosis determined by flow cytometry revealed no significant changes across time with TNF-α stimulation. Results suggest that TNF-α stimulation, at the dose used in this study, can elicit a pro-inflammatory response in BMEC, but not induce apoptosis. The impact of TNF-α on mammary vascular function and the subsequent impact on the pathophysiology of severe coliform mastitis warrant further investigation. 相似文献
47.
Describing the growth and molt of modern domestic turkey (Meleagris gallopavo) primary wing feathers
Emily M Leishman Nienke van Staaveren Don R McIntyre Jeff Mohr Benjamin J Wood Christine F Baes Alexandra Harlander-Matauschek 《Journal of animal science》2020,98(12)
The use of feathers as noninvasive physiological measurements of biomarkers in poultry research is expanding. Feather molting patterns and growth rates, however, are not well described in domestic poultry. These parameters could influence the measurement of these biomarkers. Therefore, the objective of this study was to describe the juvenile primary feather molting patterns and feather growth rates for domestic turkeys. The 10 primary wing feathers of 48 female turkeys were measured weekly from week 1 (0 d of age) to week 20. Feathers were manually measured, and the presence or absence of each primary feather was recorded weekly. Generalized linear mixed models were used to investigate if feather growth differed between the primary feathers. The molting of the juvenile primary feathers followed a typical descending pattern starting with P1 (5 wk of age), while P9 and P10 had not molted by the end of the study (20 wk of age). The average feather growth rate was 2.4 cm/wk, although there was a significant difference between the 10 primary feathers (P < 0.0001, 2.1 to 2.8 cm/wk). Over time, feather growth followed a pattern where the growth rate reaches a peak and then declines until the feather is molted. The results of this study provide a critical update of patterns of molting and feather growth in primary wing feathers of modern turkeys. This can have implications for the interpretation of physiological biomarkers, such as the longitudinal deposition of corticosterone, in the feathers of domestic turkeys. 相似文献
48.
Melissa A. Friedman Lora E. Fleming Mercedes Fernandez Paul Bienfang Kathleen Schrank Robert Dickey Marie-Yasmine Bottein Lorraine Backer Ram Ayyar Richard Weisman Sharon Watkins Ray Granade Andrew Reich 《Marine drugs》2008,6(3):456-479
Ciguatera Fish Poisoning (CFP) is the most frequently reported seafood-toxin illness in the world, and it causes substantial physical and functional impact. It produces a myriad of gastrointestinal, neurologic and/or cardiovascular symptoms which last days to weeks, or even months. Although there are reports of symptom amelioration with some interventions (e.g. IV mannitol), the appropriate treatment for CFP remains unclear to many physicians. We review the literature on the treatments for CFP, including randomized controlled studies and anecdotal reports. The article is intended to clarify treatment options, and provide information about management and prevention of CFP, for emergency room physicians, poison control information providers, other health care providers, and patients. 相似文献
49.
Daniel L. Oele Jereme W. Gaeta Andrew L. Rypel Peter B. McIntyre 《Ecology of Freshwater Fish》2019,28(2):285-301
Maximising growth during the months after hatching is critical for fishes to surpass predator gape limits, make ontogenetic shifts in diet and increase overwinter survival. Constraints on growth during early life stages can have population and community‐level implications, yet are rarely addressed by habitat restoration or fishery management efforts. To assess environmental controls on larval growth rates, we sampled adult and young‐of‐year (YOY) northern pike (Esox lucius) emigrating from spawning grounds in six tributaries of Lake Michigan. We found that YOY growth rates differed significantly among natal streams, in parallel with variation in hatch date and water temperatures. Within each stream, individual growth rates were positively associated with trophic position, as measured by nitrogen isotope enrichment and gut contents. Earlier hatching individuals also grew faster, but the strength of this relationship varied with warming water temperatures (i.e., 21–27°C). Ageing of adult spawners indicated no differences among streams in average growth rates later in life. Our findings suggest that restoration efforts should replicate ecological conditions found in habitats producing large numbers of fast‐growing YOY. Key habitat attributes include adequate water level throughout the spring spawning season, and stable, warm water temperature conditions. Providing these environments during early life history could enhance the robustness of northern pike populations by boosting fitness from hatching to emigration to adult habitats. 相似文献
50.
Joseph A. Shemanchuk Roy W. Spooner Lorraine R. Golsteyn 《Pest management science》1991,32(2):253-258
Permethrin was tested for the protection of cattle against field populations of mosquitoes. Permethrin (500 ml of a permethrin 4·0 g liter?1 aqueous emulsion) applied with a ‘Dual-Cloud’ electrostatic sprayer was effective in providing coverage of the cattle body surface of a group of four animals; 100 ml of a permethrin 5·0 g liter?1 aqueous emulsion applied with a ‘Dual-Cloud'’ electrostatic sprayer as a total body spray to a yearling heifer provided 70% or better protection from field populations of mosquitoes for at least 72 h; 500 ml of a permethrin 1·0 g liter?1 aqueous emulsion applied as a low-pressure spray to the body of a yearling heifer provided 70% or better protection from mosquitoes for at least 140 h. Permethrin applied as a total body-spray thus provides adequate protection to cattle from field populations of mosquitoes. 相似文献