Soil enzymatic activity as affected by long term application of farm yard manure and mineral fertilizer under a rainfed soybean–wheat system in N-W Himalaya

Long-term experimental sites are expected to provide important information regarding soil properties as affected by management practices. This study was designed to examine the effects of continuous fertilization, and manuring on the activities of enzymes involved in mineralization of C, N, and P on a long term (33 years) field trial under sub-temperate conditions in India. Treatments at the site included application of recommended doses of nitrogen and phosphorus (NP), nitrogen and potassium (NK), nitrogen, phosphorus and potassium (NPK), farmyard manure (FYM) with N (N + FYM), FYM with NPK (NPK + FYM) and un-amended control (C). The study was done under rainfed soybean–wheat rotation. Manure application increased soil carbohydrate, dehydrogenase, acid and alkaline phosphatases, cellulase, and protease activity significantly. Urease activity was not influenced by the manure treatment and the activity was highest in controls. Both acid and alkaline phosphatase activities were negatively influenced by chemical fertilizer treatment. Almost all the enzymes studied were significantly correlated with soil C content. The results suggest that application of FYM directly or indirectly influences the enzyme activity and it in turn regulates nutrient transformation.     

Activity of the ilicicolins against plant pathogenic fungi

Ilicicolins D, E, F, dechloroilicicolin D, ascofuranone and arthrichitin were isolated from the fermentation broth of Nectria sp (HIL Y 90 3333). The ilicicolins showed good fungicidal activity in planta.     

Simultaneous detection of stone fruit tree viruses by one-step multiplex RT-PCR

A protocol of multiplex RT-PCR in a one-tube system for the detection of the most common stone fruit trees viruses [e.g., plum pox virus (PPV), prune dwarf virus (PDV), and Prunus necrotic ringspot virus (PNRSV)], including the internal control of NADH dehydrogenase subunit 5 (nad5) gene are described here. The method specificity was tested on more than 80 different samples with various isolates and strains of the viruses. It showed that the targeted viruses produced the expected amplicons, whereas all other related viruses produced only the nad5 internal control amplicon. The method sensitivity was evaluated by comparing it with Simplex RT-PCR with the same primers; no significant differences in detection limits were recorded. Furthermore, the competitiveness of the primers in the assay was tested by serial RNA dilutions of samples with mixed and single infections. The least competitive was the internal control nad5 gene primer pair; therefore, there is a reduced risk of false negatives as all the other primers tend to be more efficient in the given primer cocktail than in the primers for internal control.     

Karyotype analysis and chromosomal evolution in Asian species of Corchorus (Malvaceae s. l.)

Here, we report the karyotypes and mean haploid idiograms of the ten Asian Corchorus species (2n = 2x = 14). Chromosomes were small, with a mean chromosome length of 2.30 μm. The largest chromosome was recorded in C. pseudo-olitorius (3.50 μm) and the shortest in C. pseudocapsularis (1.60 μm). The karyotypes of the two cultivated species (C. capsularis and C. olitorius) and C. pseudo-olitorius were the most diverse and specialized, whereas those of C. depressus and C. trilocularis were the least diverse. C. fascicularis had the most asymmetrical and C. urticifolius the most symmetrical karyotypes. An increase in genome size was accompanied by increasing karyotype diversity in terms of morphologically distinct chromosome types and interchromosomal asymmetry, with uneven distribution of additional DNA throughout the karyotype. A positive correlation between interchromosomal asymmetry and dispersion index suggested that size differences between chromosomes were mainly associated with karyotype asymmetry. Karyotypes of the Corchorus species became progressively asymmetrical in the course of evolution. Relationships among the ten Corchorus species were defined by using a neighbor-joining tree inferred from inter-simple sequence repeat data. C. fascicularis and C. pseudocapsularis, with shorter karyotypes and smaller genomes, were closely related to C. pseudo-olitorius and C. capsularis, respectively, which were characterized by relatively longer karyotypes and larger genomes. However, the two cultivated species with different levels of interchromosomal asymmetries, dispersion indices and genome sizes were distantly related. Taking this molecular evidence into consideration, we have discussed chromosomal evolution in relation to karyological data including genome size.     

LONG‐TERM MANURING AND FERTILIZER EFFECTS ON DEPLETION OF SOIL ORGANIC CARBON STOCKS UNDER PEARL MILLET‐CLUSTER BEAN‐CASTOR ROTATION IN WESTERN INDIA

Soil organic carbon (SOC) pools are important for maintaining soil productivity and reducing the net CO₂ loading of the atmosphere. An 18‐year old long‐term field experiment involving pearl millet‐cluster bean‐castor sequence was conducted on an Entisol in western India to examine the effects of chemical fertilizers and manuring on carbon pools in relation to crop productivity and C sequestration. The data showed that even the addition of 33.5 Mg ha⁻¹ C inputs through crop residues as well as farm yard manure could not compensate the SOC depletion by oxidation and resulted in the net loss of 4.4 Mg C ha⁻¹ in 18 years. The loss of SOC stock in the control was 12 Mg C ha⁻¹. Conjunctive use of chemical fertilizers along with farm yard manure produced higher agronomic yields and reduced the rate of SOC depletion. The higher average seed yields of pearl millet (809 kg ha⁻¹), cluster bean (576), and castor (827) over six cropping seasons were obtained through integrated use of fertilizers and manure. For every Mg increase in profile SOC stock, there was an overall increase of 0.46 Mg of crop yield, comprising increase in individual yield of pearl millet (0.17 Mg ha⁻¹ y⁻¹ Mg⁻¹ SOC), cluster bean (0.14) and castor (0.15). The magnitude of SOC build up was proportional to the C inputs. Carbon pools were significantly correlated with SOC, which increased with application of organic amendments. Threshold C input of 3.3 Mg C ha⁻¹ y⁻¹ was needed to maintain the SOC stock even at the low antecedent level. Copyright © 2011 John Wiley & Sons, Ltd.     

Direct monitoring of Rhizobium sp. (Cicer) in nodules and soil using lac Z fusions

We constructed lacZ fusions in Rhizobium sp. (Cicer) by random Tn5-lacZ mutagenesis. The lacZ⁺ fusants formed blue colonies on a Rhizobial minimal medium containing 5-bromo-4-chloro-3-indolyl--D-galactopyranoside (X-gal). Rhizobium sp. (Cicer) fusant HSL-2 was identified in nodules and soil in a mixed population on the basis of the lacZ⁺ phenotype. Nodule occupancy of inoculated Rhizobium sp. (Cicer) HSL-2 (lacZ⁺) was assessed by directly streaking the nodule sap on X-gal plates. This method revealed differences between rhizobia carrying identical antibiotic markers. The rhizobial population in soil was estimated by direct plate counts using a medium containing X-gal. Introduction of lacZ into the Rhizobium sp. thus provided a simple and direct method for identifying strains from nodules and soil.     

Growth and reproduction of the vermicomposting earthwormPerionyx excavatus as influenced by food materials

An outdoor study was undertaken using polyethylene containers to assess the suitability of different organic residues, soybean straw (Glycine max L. Merril.), wheat straw (Triticum aestivum L.), maize stover (Zea mays L.), chickpea straw (citer arietinum L.) and city garbage, as food for the tropical epigeic earthwormPerionyx excavatus, and to assess the influence of this earthworm on the decomposition of these materials. Maize stover was found to be the most suitable of the food materials used. Population growth ofP. excavatus was enhanced by addition of these organic materials in the temperature range 24°-30°C, while the population was adversely affected above 30°C in a vermiculture system. Addition of earthworms accelerated the breakdown of residues, which ultimately resulted in a lowering of the C:N ratio, water-soluble carbon and carbohydrates, and increased ash percentage and cation exchange capacity compared with their respective controls.     

Net oxidative addition of C(sp3)-F bonds to iridium via initial C-H bond activation

Carbon-fluorine bonds are the strongest known single bonds to carbon and as a consequence can prove very hard to cleave. Alhough vinyl and aryl C-F bonds can undergo oxidative addition to transition metal complexes, this reaction has appeared inoperable with aliphatic substrates. We report the addition of C(sp(3))-F bonds (including alkyl-F) to an iridium center via the initial, reversible cleavage of a C-H bond. These results suggest a distinct strategy for the development of catalysts and promoters to make and break C-F bonds, which are of strong interest in the context of both pharmaceutical and environmental chemistry.     

Characterization of Tolerance Limit in Spirulina platensis in Relation to Nanoparticles

A study was carried out under in vitro conditions to characterize the growth of blue green alga, Spirulina platensis, in standard CFTRI medium containing different nanoparticles of copper oxide (CuO) (50 nm, 10 ppm), zinc oxide (ZnO) (50 nm, 10 ppm), tricalcium phosphate (TCP) (<100 nm, 90 ppm), and hydroxy apatite (HA) (<200 nm, 90 ppm). S. platensis exhibited significant higher growth in standard CFTRI medium containing 90 ppm phosphorus as nanoparticles of TCP and HA. On the other hand, calcium phosphate nanoparticles caused significant reduction in nitrate reductase activity as well as in protein content of the alga. Marked change in chlorophyll-a/b ratio was also noted when phosphorus was supplied through nano tricalcium phosphate and nano hydroxy apatite particles as compared to ionic form (K₂HPO₄). The study revealed that the growth of Spirulina in the presence of ZnO nanoparticles was retarded, while no growth was observed with CuO nanoparticles. It was concluded that alga Spirulina showed much sensitivity to nanoparticles of zinc and copper (<50 nm) and was able to tolerate the toxicity of nanophosphate (tricalcium phosphate <100 nm; hydroxy apatite <200 nm).