Disturbances in European beech water relation during an extreme drought

Context

In the context of a probable increase in intensity and frequency of extreme summer drought events, a better understanding of the key processes involved in water relations is needed to improve the theoretical foundations of predictive process-based models.

Aims

This paper aims to analyse how temperate deciduous trees cope with water shortage.

Methods

The exceptional summer drought of 2003 in Europe provided an opportunity to monitor stomatal conductance and twig water potential in European beech (Fagus sylvatica L.) at predawn and midday and to analyse variations with respect to leaf height within the canopy. By comparing our field measurements of twig water potential to values found in the literature, we confirmed the strong impact of soil water shortage on crown water relations.

Results

This paper shows that (1) the vertical gradient of stomatal conductance within the crown disappeared under extreme soil water depletion; (2) at maximum drought intensity, predawn twig water potential (ψ _pd) reached ?2.3 MPa at a height of 14 m in the crown and ?2.0 MPa at a height of 10 m. The significant differences in ψ _pd between the two measurement heights in the canopy may be due to night transpiration; (3) there was a close relationship between predawn twig water potential and relative extractable soil water; (4) as drought conditions intensified, there was a close relationship between canopy radiation interception and predawn water potential, as estimated daily from relative extractable soil water.     

Widespread translational inhibition by plant miRNAs and siRNAs

High complementarity between plant microRNAs (miRNAs) and their messenger RNA targets is thought to cause silencing, prevalently by endonucleolytic cleavage. We have isolated Arabidopsis mutants defective in miRNA action. Their analysis provides evidence that plant miRNA-guided silencing has a widespread translational inhibitory component that is genetically separable from endonucleolytic cleavage. We further show that the same is true of silencing mediated by small interfering RNA (siRNA) populations. Translational repression is effected in part by the ARGONAUTE proteins AGO1 and AGO10. It also requires the activity of the microtubule-severing enzyme katanin, implicating cytoskeleton dynamics in miRNA action, as recently suggested from animal studies. Also as in animals, the decapping component VARICOSE (VCS)/Ge-1 is required for translational repression by miRNAs, which suggests that the underlying mechanisms in the two kingdoms are related.     

Assessing N,N'-Dibutylurea (DBU) formation in soils after application of n-butylisocyanate and benlate fungicides

N,N'-Dibutylurea (DBU) is a breakdown product of benomyl [methyl 1-(butylcarbamoyl)-2-benzimidazole carbamate], the active ingredient in Benlate fungicides, and has been proposed as one cause for crop damage that growers claim to have occurred from the use of Benlate 50 DF fungicide. This study assessed DBU formation upon (1). application of n-butyl-1-[(14)C]butylisocyanate (BIC), the immediate precursor to DBU formation, in four soils at two water potentials (0.03 and 0.1 MPa) and (2). application of benomyl butyl-1-(14)C-benomyl enriched Benlate DF and SP fungicides to two soils at various combinations of negative water potential (0.03 or 0.1 MPa) and temperature (23 or 33 degrees C). Parent compounds, metabolites, and (14)CO(2) were tracked using chromatographic analysis with radioassay and UV detection, liquid scintillation counting, and postextraction oxidation of the soil. At 0.03 MPa in all four BIC-treated soils, DBU formation was never detected. At 0.1 MPa, DBU was detected in two soils, but at concentrations <3.6 microg kg(-)(1) (0.3 wt % of applied BIC). In both soils treated with benomyl formulations, DBU formation was observed with only Benlate 50 DF application at 0.03 MPa and 23 degrees C, which was followed by rapid dissipation of DBU. The maximum concentration observed was 0.41 microg g(-)(1) (0.65 wt % of applied benomyl at 62.8 microg g(-)(1)), which is well below levels currently reported to cause adverse effects to plants. Combined benomyl and carbendazim half-lives in soils across treatments were 2-3 months. This study demonstrated that further production and accumulation of DBU in soils after Benlate application or from residual benomyl remaining in the soil are highly unlikely and that persistence of any DBU in soils is likely to be short-lived.     

Evaluation of fumonisin contamination in cornflakes on the Belgian market by "flow-through" assay screening and LC-MS/MS analyses

A total of 205 cornflake samples collected in Belgian retail stores during 2003-2004 were surveyed for the natural occurrence of fumonisin B1 (FB1), B2 (FB2), and B3 (FB3). These cornflake samples, originating from conventional as well as from organic production, were analyzed using an intralaboratory-validated LC-MS/MS method. Additionally, 90 cornflake samples were subjected to rapid screening using a flow-through enzyme immunoassay method to demonstrate the practicability of a screening test coupled to a validated confirmatory LC-MS/MS method for the management of food safety risks. FB(1) concentrations ranged from not detected (nd) [LOD (FB1) = 20 microg/kg] to 464 microg/kg with mean and median concentrations of respectively 104 +/- 113 and 54 microg/kg. For FB2 and FB3, the concentration ranges varied respectively from nd [LOD (FB2) = 7.5 microg/kg] to 43 microg/kg and from nd [LOD (FB3) = 12.5 microg/kg] to 90 microg/kg. Mean concentrations for FB2 and FB3 were respectively 12 +/- 8 and 21 +/- 15 microg/kg, while the median concentration was 11 microg/kg for FB2 and 19 microg/kg for FB3. From the statistical tests (chi2 and ANOVA model III), it could be concluded that the agricultural practice did not have any significant effect on the fumonisin concentrations but that the variation between different batches was significant (p < 0.0001).     

Propagule Quantity and Quality in Traditional Makushi Farming of Cassava (<Emphasis Type="Italic">Manihot esculenta</Emphasis>): A Case Study for Understanding Domestication and Evolution of Vegetatively Propagated Crops

Modeling how crop plants evolve under domestication requires estimating among-plant variation in important parameters of the reproductive system, including fecundity – the number of propagules produced – and propagule quality. Measuring these traits poses particular problems in vegetatively propagated crop plants. Unlike seeds, vegetative propagules are not intrinsic biological entities but are prepared by farmers. Propagule number and quality are thus determined by the interaction between plant traits and how farmers prepare propagules. We conducted observations, interviews and experiments to study this interaction in cassava grown by Makushi Amerindians, examining how both sources of variation, in plant traits and in farmers’ practices, combine to determine the number and quality of propagules produced. Increased stake mass, determined mostly by stem diameter, leads to increased yield and also to increased asexual ‘fecundity’ of the resulting plant. Farmers’ practices reflect knowledge of this relationship. Diameter is the key criterion in the selection of stems for stakes. Larger diameters are preferred; when thinner stems are used, stakes are cut longer, partially compensating for reduced mass. These results suggest that conscious and unconscious selection to increase ‘fecundity’ and propagule quality in cassava would act to favor plants with thicker stems. Mean stem diameter is greater, and variation in stem diameter is lower, in little-branched plants. Selection for increased asexual ‘fecundity’ can thus have led to reduction in the degree of branching, one of the most striking differences between domesticated cassava and its wild ancestors. Measuring variation in asexual fecundity is a key step in analyzing evolution of the mixed clonal/sexual reproductive systems that characterize many vegetatively propagated crop plants.     

NMR and HPLC-UV profiling of potatoes with genetic modifications to metabolic pathways

Metabolite profiling has been carried out to assess the compositional changes occurring in potato tubers after genetic modifications have been made to different metabolic pathways. Most major features in the (1)H NMR and HPLC-UV profiles of tuber extracts have been assigned. About 40 GM lines and controls belonging to 4 groups of samples (derived from cv. Record or cv. Desirée and modified in primary carbon metabolism, starch synthesis, glycoprotein processing, or polyamine/ethylene metabolism) were analyzed. Differences were assessed at the level of whole profiles (by PCA) or individual compounds (by ANOVA). The most obvious differences seen in both NMR and HPLC-UV profiles were between the two varieties. There were also significant differences between two of the four Desirée GM lines with modified polyamine metabolism and their controls. Compounds notably affected were proline, trigonelline, and numerous phenolics. However, that modification gave rise to a very abnormal phenotype. Certain lines from the other groups had several compounds present in significantly higher or lower amounts compared to the control, but the differences in mean values amounted to no more than a 2-3-fold change: in the context of variability in the whole data set, such changes did not appear to be important.     

Is it possible to forecast the grain quality and yield of different varieties of winter wheat from Minolta SPAD meter measurements?

To optimize wheat segregation for the various markets, it is necessary to add to genotype segregation, a prediction before harvest of the values of yield and grain protein concentration (GPC) for the different fields of the collecting area. Different tools allowing a prediction of crop production exist. Among them, the evaluation of nitrogen concentration by a chlorophyll meter (Soil–Plant Analysis Development (SPAD) readings), classically used to adapt the nitrogen fertilizer application, has been used in few works to foresee grain yield and grain protein concentration. But the relationships between N crop status and SPAD measurements varies among varieties and this genotypic effect has rarely been incorporated in models of forecasting grain quality.

This paper compares several models to forecast yield, nitrogen uptake in grain (NUG) and grain protein concentration from trials carried out in 2001 and 2002 at the INRA experiment station of Grignon (West of Paris). Trials crossed nine varieties by four (2002) or five (2001) nitrogen rates. Input variables of those models are mainly chlorophyll meter measurements (SPAD) on the penultimate leaf at GS65 and on the flag leaf at GS71 Zadoks growth stages and ear number per square meter (NE).

A square root model of yield based on NE × SPAD gave the best fit (RMSE = 0.6 t ha⁻¹ for both stages) if considering three different groups of genotypes. Based on the same variable, NE × SPAD, a quadratic model for NUG without significant effect of genotypes gave the best fit (RMSE, between 21 and 30 kg ha⁻¹ depending of the growth stage). And, for GPC, considering the same three groups of genotypes, the slope of the linear model with the ratio of predicted grain nitrogen concentration to predicted yield, is the same at both stages and very close to the standard value used to calculate protein concentration from nitrogen concentration (5.7), but the predictive quality of the model is more than 10% higher at GS71 (R² of 0.77) than at flowering (R² of 0.64). Finally, the sensibility of the models to delay in the stage of measurement is discussed.