Minimum number of measurements for efficient estimation of black spot resistance in papaya genotypes

European Journal of Plant Pathology - During a field survey in Tamil Nadu (2014–16), chilli plants showing chlorotic and necrotic ring spots and necrotic streaks on leaves and stems were...     

A Multi-Omics Characterization of the Natural Product Potential of Tropical Filamentous Marine Cyanobacteria

Microbial natural products are important for the understanding of microbial interactions, chemical defense and communication, and have also served as an inspirational source for numerous pharmaceutical drugs. Tropical marine cyanobacteria have been highlighted as a great source of new natural products, however, few reports have appeared wherein a multi-omics approach has been used to study their natural products potential (i.e., reports are often focused on an individual natural product and its biosynthesis). This study focuses on describing the natural product genetic potential as well as the expressed natural product molecules in benthic tropical cyanobacteria. We collected from several sites around the world and sequenced the genomes of 24 tropical filamentous marine cyanobacteria. The informatics program antiSMASH was used to annotate the major classes of gene clusters. BiG-SCAPE phylum-wide analysis revealed the most promising strains for natural product discovery among these cyanobacteria. LCMS/MS-based metabolomics highlighted the most abundant molecules and molecular classes among 10 of these marine cyanobacterial samples. We observed that despite many genes encoding for peptidic natural products, peptides were not as abundant as lipids and lipopeptides in the chemical extracts. Our results highlight a number of highly interesting biosynthetic gene clusters for genome mining among these cyanobacterial samples.     

Kinetics of Mercury Bioaccumulation in the Polychaete Hediste diversicolor and in the Bivalve Scrobicularia plana, Through a Dietary Exposure Pathway

Mercury bioaccumulation kinetics of two important macrobenthic species, the polychaete Hediste diversicolor and the bivalve Scrobicularia plana, were evaluated following a dietary pathway (i.e. contaminated algae), through a mesocosm laboratory experiment. Both studied species presented a similar model of Hg bioaccumulation kinetics, a linear pattern of accumulation through time being the mercury accumulation in the organisms proportional to the mercury concentration in the food. Mercury bioaccumulation rates were higher in the polychaete H. diversicolor (reaching approximately 0.15 μg g⁻¹ at the end of the experiment) than in the bivalve S. plana (≈0.07 μg g⁻¹), which could be related to their feeding strategies, ingestion rates and assimilation efficiencies. Moreover, the mercury bioaccumulation revealed to be quite a fast process especially for the polychaete, and despite the fact that this species is not an edible organism, it is an important prey item, which can greatly contribute to the transport of contaminants to higher trophic levels. Therefore, the bioaccumulation of mercury by these important macrobenthic species, especially the bivalves, represents a non-negligible risk for humans.     

Microalgae as Sustainable Bio-Factories of Healthy Lipids: Evaluating Fatty Acid Content and Antioxidant Activity

The demand for sustainable and environmentally friendly food sources and food ingredients is increasing, and microalgae are promoted as a sustainable source of essential and bioactive lipids, with high levels of omega-3 fatty acids (ω-3 FA), comparable to those of fish. However, most FA screening studies on algae are scattered or use different methodologies, preventing a true comparison of its content between microalgae. In this work, we used gas-chromatography mass-spectrometry (GC-MS) to characterize the FA profile of seven different commercial microalgae with biotechnological applications (Chlorella vulgaris, Chlorococcum amblystomatis, Scenedesmus obliquus, Tetraselmis chui, Phaeodactylum tricornutum, Spirulina sp., and Nannochloropsis oceanica). Screening for antioxidant activity was also performed to understand the relationship between FA profile and bioactivity. Microalgae exhibited specific FA profiles with a different composition, namely in the ω-3 FA profile, but with species of the same phylum showing similar tendencies. The different lipid extracts showed similar antioxidant activities, but with a low activity of the extracts of Nannochloropsis oceanica. Overall, this study provides a direct comparison of FA profiles between microalgae species, supporting the role of these species as alternative, sustainable, and healthy sources of essential lipids.     

Fatty acids as trophic biomarkers in vitellogenic females in an impounded tropical river

Fatty acids have been used in marine biogeochemistry as food chain biomarkers, but in freshwater these studies are rare. In order to evaluate the fatty acid potential as biomarkers in freshwater, their profile was analyzed during vitellogenesis in two fish species, in both waterfall and reservoir environments of the Paraíba do Sul River Basin. Detrivorous Hypostomus affinis and omnivorous Geophagus brasiliensis seem to elongate and desaturate polyunsaturated fatty acids (PUFA) and transfer them to the ovaries’ phospholipids. Waterfall Geophagus brasiliensis have more highly unsaturated fatty acids in the liver, but in the reservoir, accumulation mainly occurs in muscle and ovary triglycerides, suggesting trophic opportunism and a plasticity during vitellogenesis. In Hypostomus affinis, PUFA alteration occurs only in the reservoir, suggesting a high phytoplankton occurrence. Eutrophication and water speed is reflected in Hypostomus affinis ovaries by higher PUFAn3 and bacterial fatty acids. As in marine environments, analysis of mono- and polyunsaturated fatty acids during vitellogenesis can be used as a tool in food chain studies in freshwater.     

MINERALIZATION AND CORN RECOVERY OF 15NITROGEN FROM BLACK OATS RESIDUES TREATED WITH HERBICIDES

Nitrogen (N) mineralization from black oat residues (Avena strigosa), with or without previous application of herbicides, and its utilization by corn crop were investigated. The experiments were performed in a completely randomized setup, with three treatments and ten replicates. The treatments were: A) control - corn grown in soil with residues of black oats harvested without herbicide application; B) glyphosate - corn grown in soil with residues of glyphosate-desiccated black oat; and C) glufosinate - corn grown in soil with residues of black oat previously desiccated with glufosinate-ammonium. The remaining black oat residues on the soil surface were smaller in the control treatment than in glyphosate and glufosinate treatments. Black oat residues from the control treatment released 30% and 20% more carbon (C) and nitrogen (N), respectively, than from herbicide treatments. Microbial biomass carbon, total and mineral soil N arising from black oat residues were reduced by herbicide management. Black oat residues treated with glyphosate reduced corn total-N by 16%; however, dry mass yield was not affected by the treatments. Herbicide application on black oat reduced the total amount of residue-released nitrogen in the corn kernels, leaves and the whole plant. Net nitrogen mineralization from black oat residues is affected by the application of glyphosate or glufosinate-ammonium.