Application of GCOM-C SGLI for agricultural water management via field evapotranspiration

Paddy and Water Environment - Evapotranspiration is a key parameter in agricultural water planning and management strategies because it determines the crop and irrigation water requirements. With...     

Development of a monoclonal antibody for the detection of anti-canine CD20 chimeric antigen receptor expression on canine CD20 chimeric antigen receptor-transduced T cells

Chimeric antigen receptor (CAR) CAR-T cell therapy targeting CD20 can be a novel adoptive cell therapy for canine patients with B-cell malignancy. After injection of the CAR-T cells in vivo, monitoring circulating CAR-T cells is essential to prove in vivo persistence of CAR-T cells. In this study, we developed a novel monoclonal antibody against canine CD20 CAR, whose single-chain variable fragment was derived from the our previously reported anti-canine CD20 therapeutic antibody. Furthermore, we proved that this monoclonal antibody can detect therapeutic anti-canine CD20 chimeric antibody in the serum from healthy beagle dogs injected with the therapeutic antibody for safety study. This monoclonal antibody is a useful tool for monitoring both canine CD20-CAR-T cells and anti-canine CD20 therapeutic antibody for canine lymphoma.     

Molecular markers for genotyping anastomosis groups and understanding the population biology of Rhizoctonia species

Soil-borne Rhizoctonia fungi cause serious diseases in several plant species. For the classification of these fungi, the number of nuclei in a hyphal cell and the anastomosis reaction are important criteria. Although Rhizoctonia spp. has a wide host range, the causal agents have been reported to be selective for host plant families or species and lead to severe disease. Reports of new diseases, particularly in new host plants, and severe damage in agricultural fields incurred by subdivided or newly found groups of Ceratobasidium and Waitea circinata (a varied teleomorph of Rhizoctonia) have been increasing in recent years. The food production environment is altering because of climate change, introduction of potential new host plants, and heavy use of chemicals that reduce microbial diversity. These changes favor the occurrence of new diseases incurred by undefined anastomosis groups (AGs) or subgroups of Rhizoctonia spp. On the basis of the phylogenetic relationships of AGs and subgroups in Rhizoctonia spp., molecular markers for discriminating the groups of the Rhizoctonia species complex have been developed. The application of genetic markers, in the form of microsatellites or simple sequence repeats (SSR), has become increasingly important in fungal genetics. The analyses of population genetics for Rhizoctonia spp. using SSR markers elucidated the modes of sexual and asexual reproduction, phylogeographical distributions, and global migrations associated with adaptation to agroecosystems.     

Culture method and growth characteristics of marine benthic dinoflagellate Ostreopsis spp. isolated from Japanese coastal waters

Blooms of toxic dinoflagellates of the genus Ostreopsis, which is known as a producer of palytoxin (PTX) analogs, may pose a threat to human health in tropical, subtropical, and temperate regions around the world. In the present study, we established a suitable culture method for Ostreopsis spp. isolated from Japanese coastal waters and characterized their growth potential using the method to discuss their bloom dynamics. Each clonal strain of Ostreopsis cf. ovata, Ostreopsis sp.?1, Ostreopsis sp.?5, and Ostreopsis sp.?6 was incubated in 25?×?150?mm test tubes with a flat bottom containing various kinds of medium. Since Ostreopsis spp. strains grew well in IMK and/or f/2 media, we selected these media for cultivation of all the Ostreopsis spp. isolates. Growth rates of O. cf. ovata (0.834?divisions/day), Ostreopsis sp.?1 (0.619?divisions/day), and Ostreopsis sp.?6 (1.04?divisions/day) that produce PTX analogs significantly differed (p?<?0.05) respectively and are clearly higher than those of other reported epiphytic dinoflagellate Gambierdiscus toxicus, Prorocentrum lima, and Coolia monotis cultures, which suggest that these species have ecological advantages to predominate through the algal succession in Japanese coastal waters, resulting in a potential risk to human health in this region.     

A set of near-isogenic lines for blast resistance genes with an Indica-type rainfed lowland elite rice (Oryza sativa L.) genetic background

A set of near-isogenic lines for blast resistance genes was developed by using an Indica-type elite rice variety, IR49830-7-1-2-2, suitable for the rainfed lowland conditions in the tropics, as a genetic background. Initially, we revealed that IR49830-7-1-2-2 harbors five blast resistance genes - Pia, Pib, Pik-s, Pita, and Pi11(t) - by using a differential system involving 19 selected standard blast isolates from the Philippines. Based on this result, we developed nine near-isogenic lines (NILs) targeting eight resistance genes - Pik, Pi7(t), Pi3, Pi5, Pita-2, Piz-5, Pish, and Pi9 - by recurrent backcrossing. The introgression of each resistance gene in the NILs was confirmed by reaction patterns to the blast isolates, allelism tests, and DNA marker analysis. In addition, a genome-wide DNA marker survey revealed that most of the chromosome regions in each NIL were of the IR49830-7-1-2-2 type. The agricultural characteristics of most of the developed NILs were almost the same as those of IR49830-7-1-2-2. Moreover, with one exception, they showed submergence tolerance similar to IR49830-7-1-2-2. The developed NILs could be used as a multiline variety suitable for the rainfed lowland in the tropics.     

Quantitative trait loci associated with lodging tolerance in soybean cultivar ‘Toyoharuka’

Lodging tolerance (LT) is an important trait for high yield and combine-harvesting efficiency in soybean [Glycine max (L.) Merr.]. Many previous studies have investigated quantitative trait loci (QTLs) for lodging score (LS) in soybean. Most of the investigated QTLs were located in the proximal region of maturity or growth habit loci. The aim of this study was to identify genetic factors for LT not associated with maturity or growth habit. QTL analysis was performed using a recombinant inbred line (RIL) population derived from a cross between ‘Toyoharuka’ (TH), a lodging-tolerant cultivar, and ‘Toyomusume’ (TM). The genotypes of TH and TM were estimated as both e1e2E3E4 and dt1. The average LS over 4 years was used for QTL analysis, identifying a major and stable QTL, qLS19-1, on chromosome 19. The LS of the near-isogenic line (NIL) with the TH allele at Sat_099, the nearest marker to qLS19-1, was significantly lower than the NIL with the TM allele at that position. The TH allele at Sat_099 rarely had a negative influence on seed yield or other agronomic traits in both NILs and the TM-backcrossed lines. Our results suggest that marker-assisted selection for qLS19-1 is effective for improving LT in breeding programs.     

Behavioural analysis of a nonionic detergent in the kraft pulp washing process using cryo-time-of-flight secondary ion mass spectrometry and cryo-scanning electron microscopy

In order to understand the kraft pulp decolouring mechanism on using a nonionic detergent, the pulp washing process and the resulting pulp handsheets were investigated by examining the brightness, kappa number, thioacidolysis product yield, and dewatering efficiency in the pressing sheet making process. The pulp decolouring could be attributed to a decrease in the lignin content and an improvement in the dewatering efficiency. Furthermore, the detergent distribution in the aqueous pulp suspension obtained during the pulp washing process was visualised using cryo-time-of-flight secondary ion mass spectrometry/scanning electron microscopy (cryo-TOF-SIMS/SEM). The detergent was clearly observed at the transverse surface of the pulp fibre cell wall and was also detected in the lumen of the fibres, suggesting the permeation of the detergent into the pulp fibre cell wall. Based on these results, the pulp decolouring mechanism can be proposed as follows: the detergent permeates into the pulp fibre cell wall and promotes the solution-exchange between the inside and the outside parts of the fibre cell wall, finally washing away the chromophoric substances such as lignin and its degradation products owing to the enhanced dewatering efficiency.     

Economics and Employment Generation of Bamboo-Based Enterprises: A Case Study from Eastern Bangladesh

An exploratory survey was carried out to assess economics and employment generation of the trade of bamboo and bamboo-based secondary products in the eastern Bangladesh, to obtain reliable information about their status, socio-economic significance, production and marketing. The study was undertaken over 30 bamboo-based enterprises in a suburban market of eastern Bangladesh, to investigate regional product details, economic profitability and employment opportunities. The sample entrepreneurs, corresponding to about 25% of the bamboo enterprise population were interviewed using a semi-structured questionnaire. About 202 full and part-time workers were employed in the factories, under categories of artisan (who manufactured secondary products). The average number of worker’s in the large, medium and small factories were 9 (artisan 40%), 6.45 (artisan 35%) and 5 (artisan 25%) respectively. The study revealed that there was always a satisfied demand of skilled artisans. Most of the workers were relatively newly employed (not more than 5 years). The daily wage rate varied between 70 and 130 Tk. ($US 1 equals approximately 70 Bangladeshi Taka (Tk.), as at December 2008). Bambusa balcooa was the most utilized species (39.96%) in terms of monetary value. The price of a single B. balcooa culm in the local market was Tk. 160–210. Nine sizes of articles under seven bamboo categories were identified, these being bera (36″ × 120″ and 72″ × 96″), bookshelf (36″ × 24″), chaluni (12″ × 12″), chatai (48″ × 60″ and 36″ × 48″), jhuri, rickshaw hood and tukri. Net average profit per article was the highest for rickshaw hoods (Tk. 400 at the retailer stage). The total expected annual income for an enterprises from all articles types sold was estimated to be Tk. 85,800. Three distinct marketing channels were identified for selling bamboo and value-added secondary products. The study also generated policy implications for effective management of bamboo-based enterprises.     

Hydrogen peroxide produced by a low‐molecular‐weight compound in milk with high electrical conductivity in dairy cows

In dairy cows, hydrogen peroxide (H₂O₂) produced from a low‐molecular‐weight compound in milk from inflamed quarters was lower than that in milk from un‐inflamed quarters. In milk of delivery grade, characteristics of H₂O₂ production in milk with high electrical conductivity (EC) were examined in this study. Milk samples were collected from a total of 230 cows at 1‐month intervals, and the EC of skimmed milk was determined. Based on the highest and the lowest EC of a cow's quarter milk, the inter‐quarter difference of ≥0.6 mS/cm (mean + t_0.01 SE) was taken as a high EC. Milk with high EC was found in 52 quarters. In cows with milk of high EC, H₂O₂ production in milk with normal EC was higher than that in milk with high EC in the same animal but was lower than that in the control population. In milk with high EC, the decrease of H₂O₂ production correlated with the increase in EC. The production of H₂O₂ decreased in particular when the inter‐quarter difference exceeded 0.8 mS/cm. In milk collected from the same quarter 1 month before, EC changed from normal to high, and H₂O₂ production decreased. In milk from the other three quarters, EC remained normal and H₂O₂ production remained unchanged. We concluded that milk with high EC appeared in low H₂O₂‐producing cows. The results suggest that the degree of decrease in H₂O₂ production reflects the extent of quarter abnormality.