Genomic organization of the T-cell receptor gamma gene and PCR detection of its clonal rearrangement in canine T-cell lymphoma/leukemia

Because the T-cell receptor gamma (TCRgamma) gene is rearranged at an early stage of T-cell development in both TCRalphabeta and TCRgammadelta lineages, it has been preferentially targeted to detect T-cell clonality in human lymphoma/leukemia. We isolated 22 independent cDNA clones encoding canine TCRgamma and the following analysis of nucleotide sequences using the dog genome database revealed that the canine TCRgamma locus contains at least four repertories of variable genes that can be organized into two distinct subgroups and six repertories of joining genes belonging to two distinct subgroups according to the nucleotide sequence similarity. The findings allowed us to design PCR primers that were directed to the conserved or specific nucleotide sequences for each subgroup of variable and joining genes. By using four different combinations of primers, a PCR-based analysis was performed on cell samples collected from T-cell lymphoma/leukemia and B-cell lymphoma cases and hyperplastic and normal lymph nodes. All cell samples from 11 T-cell malignancy cases exhibited clonal amplification by two out of four primer combinations. This finding was considered to be valuable in PCR-based analysis for detecting T-cell clonality in canine lymphoma/leukemia.     

Fractional determination of functional groups of humic acids by conductometric titration

The conductometric replacement titration proposed in a previous report disclosed that the functional groups of humic acids are fractionated into three clusters of different dissociation constants, designated as VW, W and S clusters. In this paper, the method was examined to ascertain the relationship between the concentration of a sample and the amounts of fractionated clusters. The total amounts of fractionated clusters as well as the amount of the S cluster were directly proportional to the concentration of the sample, whereas the amount of the VW cluster decreased a little as concentration increased. The same method, applied to various types of humic acids in Japan, showed that the sums of the functional groups and the ratios of the S cluster to the sums likewise decreased in the order of A type > B and P types > Rp type. The total acidities determined by conductometry were nearly equal to the sums of carboxyl determined by Blom's method and phenolic hydroxyl determined by Folin's method.     

Gonadal maturation and spawning migration of stocked female barfin flounder Verasper moseri off the Pacific coast of northern Japan

Commercial catches of barfin flounder Verasper moseri, an important target flatfish for stock enhancement programs in northern Japan, have recovered remarkably since the large-scale release of seedlings from Hokkaido in 2006. However, their reproductive ecology remains unclear. Our study of 2008–2012 investigated seasonal changes in the maturity of stocked female barfin flounder (n = 4,123) off the Pacific coast from Hokkaido to Tohoku (35.7°–43.4°N). Histological observation of ovaries revealed that fish undergoing vitellogenesis were observed mainly off Hokkaido and partially off northern Tohoku during August–January (40.2°–43.4°N). However, fully matured or spawning fish were not found near those areas. They were observed only in southern Tohoku. Ongoing spawning was observed off southernmost Tohoku (35.8°–37.5°N around 300 m depth) from early February through late April, when commercial landings had decreased drastically off Hokkaido. Spent fish were caught only rarely off southern Tohoku, but were observed frequently off Hokkaido during April–June. These results demonstrate that spawning grounds form at the upper continental slope off southernmost Tohoku during February–April. Relations between maturation traits and seasonal landings strongly suggest that female barfin flounder repeatedly migrate more than 700 km from feeding grounds off Hokkaido to spawning grounds off southern Tohoku.     

Light-chain multiple myeloma in a cat.

A diagnosis of light-chain multiple myeloma was made in an 11-year-old male American Shorthair cat. The cat showed atypical plasma cell infiltration in the bone marrow, biclonal gammopathy caused by polymerization of myeloma protein (M-protein), and Bence-Jones proteinuria. The M-protein in the serum of the cat was analyzed by using 12% sodium dodeyl sulfate (SDS) polyacrylamide gel electrophoresis with Coomassie brilliant blue staining. An intense band with a size of 27 kDa, the size of the immunoglobulin light chain, was clearly observed, whereas the band corresponding to the immunoglobulin heavy chain (59 kDa) was undetectable. The 27-kDa band was confirmed to be an immunoglobulin light chain by Western blotting by using antibodies for feline immunoglobulin. These data suggested that the neoplastic plasma cells produce light chain only, leading to the diagnosis of light-chain multiple myeloma in the cat.     

A new method for determining ferrous iron in paddy soils

Introduction

To make clear the chemical behavior of free iron compounds in paddy soils, it is necessary to find an accurate and rapid method for determining ferrous iron in waterlogged paddy soils. Several methods^1,2,3) have been proposed for this purpose, most of which use dilute acids, such as sulfuric and hydrochloric acid, as extracting reagents. According to the writers' experience, however, these methods seem to be inadequate. The reason is that the acid solutions extract not only ferrous iron, but also ferric iron and reducing substances from soils, and the latter two react immediately in the extract to produce ferrous iron, thus we obtain larger value for ferrous iron than the one actually existing in soils. The writers have found that acetate buffer of pH 2.8 is a very suitable extractant for ferrous iron, and they have been able to establish a new method for the determination of ferrous iron in soils using this buffer. The experimental details will be given in this paper.     

Studies on the colour of humic acids

Based on their solubility, humus has been often divided into three fractions, i.e. fulvic acids, humic acids and humins. On the other hand, it seems to be generally accepted that humus can be divided into two groups (1) (2), non-humic substances and humic substances. The term humic substances (3) is used as a generic expression to describe the dark coloured, amorphous material in humus, or any of its above-mentioned fractions.     

Viscosimetric characteristics of humic acid

One of the authors, KUMADA (I), has proposed a new classification of humic acids based on their colour and spectral characteristics in the visible and ultra-violet regions. Humic acids can be grouped into four major types by this procedure (A, B, Rp and P types) and evidence for a classification diagram based on the values ΔlogK and RF has recently been presented (2). It is clearly important that the usefulness of this new classification should be investigated by considering other chemical and physical properties of humic acids.     

A novel fractionation technique of humic acid using a resinous ion exchanger

The purpose of this study was to fractionate humic acid by using a resinous ion exchanger containing a complex metal ion.     

Habitat utilization,feeding, and growth of wild spotted halibut <Emphasis Type="Italic">Verasper variegatus</Emphasis> in a shallow brackish lagoon: Matsukawa-ura,northeastern Japan

Habitat utilization, feeding, and growth of a rare pleuronectid flatfish, spotted halibut Verasper variegatus, were examined in a brackish lagoon in northeastern Japan: Matsukawa-ura. The distribution and date–length data of spotted halibut collected mainly from beam-trawl samplings during 1983–2008 indicated that age-0 juveniles [n = 25, 6.0–18.0 cm total length (TL)] and older spotted halibut (n = 71, 13.8–43.0 cm TL) inhabited almost the entire northern part of Matsukawa-ura. Comparative distribution surveys of spotted halibut, stone flounder, and marbled flounder during 1985–1989 revealed similar distribution patterns of these flatfishes; the highest densities were found around the central part of Matsukawa-ura, although significantly lower abundance was detected for spotted halibut. Linear growth equations of age-0 juveniles demonstrated that spotted halibut were able to achieve high growth after June, probably because abundant prey (e.g., mysids and gammarids) and suitable physical conditions (warmer water temperature and lower salinity) were present. The main prey items shifted from various crustaceans including mysids, caridean shrimps, and anomurans to brachyura Hemigrapsus spp. (≥20 cm TL). Our study shows that spotted halibut use the shallow brackish lagoon as an important nursery for juveniles, and also as a feeding ground for young and adults.