Multi-scale network analysis shows scale-dependency of significance of individual protected areas for connectivity

Context

The problem of how ecological mechanisms create and interact with patterns across different scales is fundamental not only for understanding ecological processes, but also for interpretations of ecological dynamics and the strategies that organisms adopt to cope with variability and cross-scale influences.

Objectives

Our objective was to determine the consistency of the role of individual habitat patches in pattern-process relationships (focusing on the potential for dispersal within a network of patches in a fragmented landscape) across a range of scales.

Methods

Network analysis was used to assess and compare the potential connectivity and spatial distribution of highland fynbos habitat in and between protected areas of the Western Cape of South Africa. Connectivity of fynbos patches was measured using ten maximum threshold distances, ranging from five to 50 km, based on the known average dispersal distances of fynbos endemic bird species.

Results

Network connectivity increased predictably with scale. More interestingly, however, the relative contributions of individual protected areas to network connectivity showed strong scale dependence.

Conclusions

Conservation approaches that rely on single-scale analyses of connectivity and context (e.g., based on data for a single species with a given dispersal distance) are inadequate to identify key land parcels. Landscape planning, and specifically the assessment of the value of individual areas for dispersal, must therefore be undertaken with a multi-scale approach. Developing a better understanding of scaling dependencies in fragmenting landscapes is of high importance for both ecological theory and conservation planning.

     

Economic values for lean meat and fat efficiency in Norwegian Landrace nucleus pig population

A profit function was developed to estimate economic values for new efficiency traits for fattening pigs in Norwegian Landrace. These traits were lean meat efficiency (LME) and fat efficiency (FE). LME and FE described how much feed the animal used to produce 1?kg lean meat and fat as a deviation from the mean. Both traits were derived from analysing total feed consumption in a random regression model which included lean meat and fat content of the carcass (FC) as random covariates. In addition, economic values and breeding values were calculated for days from 40 to 100/120?kg live weight (DAYS), lean meat percentage (LMP) and FC. To compare LME and FE with total feed intake (FI), two indexes were constructed. One index included LME, FE, DAYS, LMP and FC and was referred to as breeding goal A and one index included FI, LMP and DAYS and was referred to as breeding goal B. The standardized economic values for LME and FE were 8.9 and 2.9 EUR/σ_a, respectively. There was a larger variation in the index for breeding goal A (SD?=?5.65) than B (SD?=?3.97). The results suggested that the two efficiency traits had an economic importance in pork production and that there was a potential for increased genetic gain in profit by using breeding goal A compared to breeding goal B.     

Influence of plant communities and soil properties on trace gas fluxes in riparian northern hardwood forests

Wetlands contribute significant amounts of greenhouse gases to the atmosphere, yet little is known about what variables control gas emissions from these ecosystems. There is particular uncertainty about forested riparian wetlands, which have high variation in plant and soil properties due to their location at the interface between land and water. We investigated the fluxes of carbon dioxide (CO₂), nitrous oxide (N₂O), and methane (CH₄) and associated understory vegetation and soil parameters at five northern hardwood riparian sites in the Adirondack Park, NY, USA. Gas fluxes were measured in field chambers 4 times throughout the summer of 2008. CO₂ flux rates ranged from 0.01 to 0.10 g C m⁻² h⁻¹, N₂O fluxes ranged from −0.27 to 0.65 ng N cm⁻² h⁻¹ and CH₄ flux rates ranged from −1.44 to 3.64 mg CH₄ m⁻² d⁻¹. Because we observed both production and consumption of N₂O and CH₄, it was difficult to discern relationships between flux and environmental parameters such as soil moisture and pH. However, there were strong relationships between ecosystem-scale variables and flux. For example, CO₂ and N₂O flux rates were most strongly related to percent plant cover, i.e., the site with the lowest vegetation cover had the lowest CO₂ and highest N₂O emissions. These ecosystem-scale predictive relationships suggest that there may be prospects for scaling information on trace gas fluxes up to landscape and regional scales using information on the distribution of ecosystem or soil types from remote sensing or geographic information system data.     

Influence of coarse wood and pine saplings on nitrogen mineralization and microbial communities in young post-fire Pinus contorta

Nitrogen (N) limits productivity in many coniferous forests of the western US, but the influence of post-fire structure on N cycling rates in early successional stands is not well understood. We asked if the heterogeneity created by downed wood and regenerating pine saplings affected N mineralization and microbial community composition in 15-yr old lodgepole pine (Pinus contorta var. latifolia) stands established after the 1988 fires in Yellowstone National Park (Wyoming, USA). In three 0.25-ha plots, we measured annual in situ net N mineralization in mineral soil using resin cores (n = 100 per plot) under pine saplings, downed wood (legacy logs that survived the fire, and fire-killed trees that had fallen and were contacting or elevated above the ground), and in bare mineral soil. Annual in situ net N mineralization and net nitrification rates were both greater in bare mineral soil (8.4 ± 0.6 and 3.6 ± 0.3 mg N kg_soil⁻¹ yr⁻¹, respectively) than under pine saplings, contact logs, or elevated logs (ca. 3.9 ± 0.5 and 0.8 ± 0.1 mg N kg_soil⁻¹ yr⁻¹, respectively). Net nitrification was positively related to net N mineralization under all treatments except for elevated logs. In laboratory incubations using ¹⁵N pool dilution, NH₄⁺ consumption exceeded gross production by a factor of two in all treatments, but consumption and gross production were similar among treatments. Contrary to our initial hypothesis, microbial community composition also did not vary among treatments. Thus, two- to three-fold differences in in situ net N mineralization rates occurred despite the similarity in microbial communities and laboratory measures of gross production and consumption of NH₄⁺ among treatments. These results suggest the importance of microclimate on in situ annual soil N transformations, and differences among sites suggest that broader scale landscape conditions may also be important.     

Ploidy reduction in blackberry

Polyploidy in blackberries and ploidy differences between Rubus species are obstacles to the efficient introduction of valuable germplasm, both intra- and interspecific, into blackberry breeding programs. Expansion of the germplasm base would be facilitated by reducing the ploidy level of blackberry cultivars to the diploid level. In this report selection of twin seed, interspecific hybridization, and pollen irradiation were compared as methods in the recovery of dihaploids from tetraploid blackberry cultivars. One dihaploid was obtained through selection of twin seed and several were obtained following interspecific hybridization. The infrequency of twinning and difficulty in detecting twin seed in Rubus reduced the efficiency of this method. The efficiency with which dihaploids could be obtained following interspecific hybridization varied with the pollen parent. Reduced seed set and seed quality following pollinations with respectively R. parvifolius and R. hirsutus could be used to advantage in the recovery of dihaploids from blackberries. Ploidy reduction in several tetraploid blackberry cultivars was obtained following pollinations with 100 and 150 kR gamma irradiated pollen. Most of the seedlings obtained at the 50 kR dosage were aneuploid. Pollen irradiation at 150 kR was the most efficient method of obtaining dihaploids from tetraploid blackberries. Twenty percent of the seedlings obtained following this treatment were dihaploid.     

Migratory gauntlets on oceanic islands: Watershed disturbance increases the cost of amphidromy

Migratory fishes can be threatened by conditions encountered along dispersal pathways that impede access to feeding or breeding grounds. In this study, we tested the hypothesis that amphidromous fishes are equally or more sensitive to conditions along dispersal pathways than conditions in primary residential habitats. We did so by conducting distribution‐wide population surveys of all five amphidromous gobies native to the Hawaiian Islands to assess responses to in‐stream habitat, invasive species and watershed land use. We used Redundancy Analyses to assess whether goby densities varied according to local, downstream or upstream conditions. We found that population densities of the two non‐climbing species (Eleotris sandwicensis, Stenogobius hawaiiensis) varied according to local land use and local habitat conditions. Greater densities of E. sandwicensis also were found in watersheds with greater forest cover upstream of survey sites. Lower densities of two species that migrate farther inland (Awaous stamineus, Sicyopterus stimpsoni) were observed in watersheds with greater anthropogenic land use downstream or at the stream mouth. Population densities of E. sandwicensis and both Sicydiine species (Lentipes concolor, S. stimpsoni) also were lower when non‐native Poeciliids were locally present or present downstream in the watershed. These findings suggest that densities of native Hawaiian amphidromous fishes are equally or more sensitive to conditions along migratory pathways relative to conditions in primary residential habitats. Thus, alleviating pressures by removing invasive species and restoring habitat along dispersal pathways could be effective approaches to increasing densities of amphidromous species, especially those that migrate farther inland to higher elevations.     

Enchytraeids in a changing climate: A mini-review

The climate is undergoing rapid changes with rising atmospheric CO₂ concentration, increasing temperatures and changes in the hydrological regimes resulting in more frequent and intense drought periods. These three climate change factors will, separately and in combination, affect the biotic and abiotic components of soil communities. This paper reviews the impact of climate change on field communities of enchytraeids with special emphasis on Cognettia sphagnetorum because most relevant studies have involved this species. C. sphagnetorum prefers cold and wet environments and several studies suggest that reductions of soil moisture may have dramatic consequences for C. sphagnetorum and other enchytraeid species. Effects of changing temperatures are less clear partly because thermal conditions influence soil moisture, which complicate the predictions of the outcome from such changes. The predicted increasing annual mean temperature may be stimulating and expand the season for growth and reproduction of enchytraeids; on the other hand, an increased frequency of extreme weather events, with heat waves during summer and bare soil freezes during autumn and spring, may occasionally cause severe mortality. Stimulating effects of increased atmospheric CO₂ have been observed, perhaps due to increased food availability via root and litter production. However, effects of CO₂ are also influenced by moisture and temperature. Generally, there is a lack of research looking into the complicated interactions between various climate change factors, and little is known about the potential of enchytraeids to adapt to a changing climate. Existing data suggest that C. sphagnetorum is not capable of adapting to a drier climate, thus, a decline in abundance and distribution of this species is possible. Since enchytraeids are of ecological significance in some types of habitats, a reduction may result in serious disruption in the functioning of these decomposer communities.     

Environmental photochemistry of tylosin: efficient, reversible photoisomerization to a less-active isomer, followed by photolysis

The environmental photochemical kinetics of tylosin, a common veterinary macrolide antibiotic and growth promoter, were investigated under simulated sunlight. An efficient, reversible photoisomerization was characterized using kinetic, mass spectrometry, and proton nuclear magnetic resonance data. The photoisomerization was confirmed to occur by a rotation about the distal alkene of the ketodiene functionality. Concurrent forward (quantum yield = 0.39 +/- 0.09) and back (quantum yield = 0.32 +/- 0.08) reactions lead to a photochemical equilibrium near a tylosin/photoisomer ratio of 50:50, completed in less than 2 min under a spectrum equivalent to noontime, summer sunlight. The activity of the isomer for the inhibition of Escherichia coli DH5alpha growth was observed to be less than that of tylosin. On a longer time scale than that of isomerization, the isomer mixture undergoes photolysis with a quantum yield of (1.4 +/- 0.3) x 10(-3). The observed quantum yields and UV-vis absorbance data allow for the prediction of the photochemical behavior of tylosin in most environmental systems. Indirect photosensitization was not a significant loss process in solutions of Suwannee River fulvic acid with concentrations from 1 to 20 mg L(-1).     

Soil organic carbon temperature sensitivity of different soil types and land use systems in the Brazilian semi‐arid region

Quantifying the sensitivity of soil organic matter decomposition (SOM) to global warming is critical for predict future impacts of climate change on soil organic carbon stocks (SOC) and soil respiration, especially in semi‐arid regions such as north‐eastern Brazil, where SOC stocks are naturally small. In this study, the responses of the labile and recalcitrant carbon components and soil respiration dynamics were evaluated in three different soil types and land use systems (native vegetation, cropland and pasture) of the Brazilian semi‐arid region, when submitted to temperature increase. After 169 days of incubation, the results showed that an increase of 5°C generated an average increase in CO₂ emission of 12.0%, but which could reach 28.1%. Overall, the labile carbon (LC) in areas of native vegetation showed greater sensitivity to temperature than in cropland areas. It was also observed that recalcitrant carbon (RC) was more sensitive to warming than LC. Our results indicate that Brazil's semi‐arid region presents a substantial vulnerability to global warming, and that the sensitivity of RC and of LC in areas of native vegetation to warming can enhance SOC losses, contributing to positive feedback on climate change, and compromising the productive systems of the region. However, further studies evaluating other types of soil and texture and management systems should be carried out to consolidate the results obtained and to improve the understanding about SOM decomposition in the Brazilian semi‐arid region.