PCB removal,soil enzyme activities,and microbial community structures during the phytoremediation by alfalfa in field soils

Purpose  

An in situ phytoremediation trial was developed in order to investigate the function of alfalfa during a 2-year bioremediation of an agricultural soil contaminated with polychlorinated biphenyls (PCBs). The study was conducted with the aim to better understand the application potential of PCB phytoremediation at field scale.     

Interactions between arbuscular mycorrhizal fungi and phosphate-solubilizing fungus (<Emphasis Type="Italic">Mortierella</Emphasis> sp.) and their effects on <Emphasis Type="Italic">Kostelelzkya virginica</Emphasis> growth and enzyme activities of rhizosphere and bulk soils at different salinities

This study investigated the interactions between two arbuscular mycorrhizal fungi (AMF) (Glomus aggregatum and Glomus mosseae) and a P-solubilizing fungus (Mortierella sp.), with respect to their effects on growth of Kostelelzkya virginica and urease, invertase, neutral phosphatase, alkaline phosphatase, and catalase activities of rhizosphere and bulk soils at different salinity levels (i.e., 0, 100, 200, and 300 mM NaCl). Percentage of AMF colonization, Mortierella sp. populations, pH, electrical conductivity, and available P concentration in soil were also determined. Combined inoculation of AMF and Mortierella sp. increased the percentage of AMF colonization and Mortierella sp. populations under salt stress (i.e., 100, 200, and 300 mM NaCl). The dual inoculation of Mortierella sp. with AMF (G. aggregatum or G. mosseae) had significant effects on shoot and root dry weights and available P concentrations, pH values, and electrical conductivities of rhizosphere and bulk soils under salt stress. The inoculation of Mortierella sp. significantly enhanced the positive effects of AMF on some enzyme activities (i.e., neutral phosphatase, alkaline phosphatase, and catalase in bulk soil; neutral phosphatase and urease in rhizosphere soil); on the contrary, it produced negative effects on urease activities in bulk soil and invertase activities in bulk and rhizosphere soils. The results indicated that the most effective co-inoculation was the dual inoculation with Mortierella sp. and G. mosseae, which may help in alleviating the deleterious effects of salt on plants growth and soil enzyme activities.     

Complete chloroplast genome sequence of rapeseed (<Emphasis Type="Italic">Brassica napus</Emphasis> L.) and its evolutionary implications

The complete nucleotide sequence of the rapeseed (Brassica napus L.) chloroplast genome (cpDNA) was determined. The 152,860 bp cpDNA contained a pair of 26,035 bp inverted repeat regions (IR), which are separated by small and large single copy regions (SSC and LSC) of 83,030 and 17,760 bp, respectively. The major portion (56.4%) of the B. napus cpDNA consists of gene coding regions, while intergenic spacers make up 43.6% of the complete genome. The average AT content of the B. napus cpDNA is 63.7% and for the LSC, SSC and IR region is 65.9, 70.8 and 57.7%, respectively. Fifteen genes contained one intron, while three genes had two introns. In total, 86 simple sequence repeats were identified. The detailed comparison of the B. napus with one of its putative parents, B. rapa L. cpDNA indicated that the two species were highly similar. The entire gene pool and relative positions of 113 individual genes were identical to those of B. rapa cpDNA. The sequence divergence analysis of B. napus and B. rapa showed only 0.133% in the coding regions, 0.275% in the intron regions, and 0.348% in the intergenic spacer regions. The phylogenies based on 61 protein coding genes from 48 cpDNA sequences provided strong support for monophyly of many major classes of angiosperms and provided support that Amborella could be a sister to all other angiosperms. Our analysis also supported that B. napus is the closest species to B. rapa and B. rapa could be the mathernal parent of B. napus cv. zy036.     

Characterization of Sardinian cork oak (<Emphasis Type="Italic">Quercus suber</Emphasis> L.) genetic resources for economically important traits

Considering the very high socio economic value of cork oak (Quercus suber L.) in Mediterranean areas, a better knowledge of local genetic resources is necessary in order to reach a good balance between the conservation issues and the need of an efficient cork production network. In such frame, local germplasm of Q. suber from the main cork production areas of Sardinia was analysed for DNA and isozyme polymorphisms and for cork quality in relation to some environmental parameters. A total number of 24 sample stands of cork oak were selected, representing typical vegetation, sylvicultural and cork quality features within the eight identified cork growing areas in Sardinia. Considerable variation was found between cork oak stands of the different areas. Results of the principal component analysis performed on the cork quality data and environmental characters of the eight areas, showed that the first three components explain 72.2% of the variation. The major characters involved in this differentiation were cork quality characters such as dimensional recover, moisture and Mg content of the cork and also elevation of stands m a.s.l. for the first component. The second component appears to be determined by some climatic parameters (average annual temperature and average of the minimum temperatures of coldest month) and by the Fe and Zn in the cork. For the third component, major characters involved in differentiation are average annual rainfall, bark thickness and Ca content in the cork.     

Reducing CH<Subscript>4</Subscript> and CO<Subscript>2</Subscript> emissions from waterlogged paddy soil with biochar

Purpose  

A potential means to diminish increasing levels of CO₂ in the atmosphere is the use of pyrolysis to convert biomass into biochar, which stabilizes the carbon (C) that is then applied to soil. Before biochar can be used on a large scale, especially in agricultural soils, its effects on the soil system need to be assessed. This is especially important in rice paddy soils that release large amounts of greenhouse gases to the atmosphere.     

Characterization of <Emphasis Type="Italic">Prosopis cineraria</Emphasis> (L.) Druce germplasm with suitable horticultural traits from the hot arid region of Rajasthan,India

Sixteen germplasm accessions of Prosopis cineraria with suitable horticultural traits were identified from north-western Rajasthan, India, propagated clonally by budding on seedling rootstock and maintained in the field gene bank. Morphological characterization of seven-year-old trees of these accessions by 21 traits indicated a lot of variation among the accessions tested. Higher number of flowers per raceme was found in accession CIAH/K2, higher width of ripened pod in CIAH/K5, higher number of seeds per pod in CIAH/K12 and a higher weight of seed per pod in CIAH/K6. Overall, CIAH/K16 was found to be a superior genotype for most of the useful traits. High significant positive correlation was obtained with traits useful for horticultural values. Out of 62 random decamer primers for random amplification (RAPD) reaction, and four minisatellite core sequence for direct amplification of minisatellite DNA (DAMD) screened with these accessions, 12 RAPD and 2 DAMD primers were found polymorphic. Average polymorphism resolved by these markers among the accessions was 93.2%. Genetic diversity revealed by Jaccard’s co-efficient was between 0.11 and 0.77, and four major clusters were identified among these accessions by phylogenetic analysis using NTSYSpc-2.02e software. This study shows the existence of high genetic diversity within these accessions.     

Stability in solution and reactivity with soils and soil components of iron and zinc complexes

Naturally derived complexes with the ability to complex (unidentate) or chelate (polydentate) metals are a cheaper alternative to synthetic chelates to correct micronutrient deficiencies, but despite their widespread use there is a lack of knowledge on their agronomic performance. The aim of this paper was to evaluate the stability of iron (Fe) and zinc (Zn) lignosulfonate, gluconate, amino acid, and humate complexes in solution over time and at different pH values. Also, their stability in a concentrated nutrient solution and their reactivity with soils and soil components was evaluated. In our experimental conditions, all the complexes (except Fe amino acid) remained stable in solution for an extended period of time. All Zn complexes and the Fe lignosulfonate were stable in solution up to pH 7.0–7.5, while Fe gluconate only maintained 20%–40% of the iron in solution in the pH range 5–11 and Fe amino acid and humate complexes barely maintained small concentrations of Fe in solution above pH 3. Most of the complexes maintained Fe and Zn in concentrated nutrient solutions for irrigation systems, but Fe amino acid only maintained around 70% of the iron added. In general, the interactions of complexes with soils and soil components produced a high retention. The interaction of Fe lignosulfonate with peat, illite, and ferrihydrite, and Fe gluconate with peat and illite resulted in significant amounts of Fe to remain in solution, while for the Fe amino acid and humate the Fe remaining in solution was low. All Zn complexes were highly retained in an acidic peat, illite, and montmorillonite clays and soils, while no retention was observed on ferrihydrite. In conclusion, the stability of complexes in different conditions is related to the percentage of complexed element in the products. While complexes can be used to maintain micronutrients in solution in aqueous media (foliar and fertigation), their application to soil should be considered as a measure to increase metal availabilities but not their solubility.     

Fungal degradation of chlorpyrifos by <Emphasis Type="Italic">Acremonium</Emphasis> sp. strain (GFRC-1) isolated from a laboratory-enriched red agricultural soil

The organophosphorus insecticide, chlorpyrifos, has been widely applied in agriculture; in veterinary, against household pests; and in subterranean termite control. Due to its slow rate of degradation in soil, it can persist for extended periods in soil with a significant threat to environment and public health. The mixed and pure fungi were isolated from three soils by enrichment technique. The enriched mixed fungal cultures were capable of biodegrading chlorpyrifos (300 mg L⁻¹) when cultivated in Czapek Dox medium. The identified pure fungal strain, Acremonium sp., utilized chlorpyrifos as a source of carbon and nitrogen. The highest chlorpyrifos degradation (83.9%) by Acremonium sp. strain GFRC-1 was found when cultivated in the nutrient medium with full nutrients. Desdiethyl chlorpyrifos was detected as a major biodegradation product of chlorpyrifos. The isolated fungal strain will be used for developing bioremediation strategy for chlorpyrifos-polluted soils.     

Evolution of flavanols, anthocyanins, and their derivatives during the aging of red wines elaborated from grapes harvested at different stages of ripening

Several red wines were elaborated to assess the effect of the degree of grape ripening on wine color and on the levels of flavanol and anthocyanin compounds, which are chiefly responsible for the wine color attributes. Two different cultivars and three different degrees of ripening were studied in two consecutive years. The wines were aged for 1 year in American oak barrels of medium-high char followed by 6 months in the bottle. The results showed that the wines made from more mature grapes had generally higher free anthocyanin content, and during aging the decrease of the free anthocyanins and flavanols took place in conjunction with an increase in the levels of the anthocyanin derivatives or "new pigments", which are responsible for maintaining color intensity and adding violet hues in aged wines. From the results obtained, it seems to be clear that the characteristics and composition of grapes harvested later (7-8 days in this region and for these varieties) than the usual time are quite beneficial to obtaining quality aged wines. The phenolic composition of wines made from the last harvested grapes is mainly responsible for the stability of their color, which is extremely important in product acceptance with a significant increase hence of product quality.     

Interactive effect between Cu‐adapted arbuscular mycorrhizal fungi and biotreated agrowaste residue to improve the nutritional status of Oenothera picensis growing in Cu‐polluted soils

The interactive effect of sugar beet (SB) agrowaste and arbuscular mycorrhizal (AM) fungi inoculation in response to increasing Cu levels was evaluated in the metallophyte Oenothera picensis. Plants were grown in a Cu‐added soil (0, 100, or 500 mg Cu kg^?1), in presence or absence of SB, and inoculated with: (1) indigenous Cu adapted mycorrhiza (IM) isolated from Cu‐polluted soils; (2) Claroideoglomus claroideum (CC); or (3) maintained uninoculated (control). Sugar beet application produced an increase in shoot biomass of 2 to 7 times, improving plant nutritional status and allowing their survival at the highest Cu concentrations. Moreover, AM fungi utilization had a positive effect promoting the plant establishment; nevertheless, Cu plant concentration as well as the mycorrhizal development in terms of AM colonization, AM spore density, and glomalin production were strictly dependent of the AM fungi strains used. Remarkable differences between AM fungi strains were observed at the highest soil Cu level where only plants colonized by IM were able to survive and grow when no SB residue was added. An interactive effect between AM fungi and SB produced a higher plant growth than plants without the amendment application, improving the plant establishment and allowing their survival at highest copper concentrations, suggesting that this combination could be used as a biotechnological tool for the phytoremediation of Cu‐polluted soils.