Mutations in dynein link motor neuron degeneration to defects in retrograde transport

Degenerative disorders of motor neurons include a range of progressive fatal diseases such as amyotrophic lateral sclerosis (ALS), spinal-bulbar muscular atrophy (SBMA), and spinal muscular atrophy (SMA). Although the causative genetic alterations are known for some cases, the molecular basis of many SMA and SBMA-like syndromes and most ALS cases is unknown. Here we show that missense point mutations in the cytoplasmic dynein heavy chain result in progressive motor neuron degeneration in heterozygous mice, and in homozygotes this is accompanied by the formation of Lewy-like inclusion bodies, thus resembling key features of human pathology. These mutations exclusively perturb neuron-specific functions of dynein.     

Evaluation of the durability of the <Emphasis Type="Italic">Barley yellow dwarf virus</Emphasis>-resistant <Emphasis Type="Italic">Zhong ZH</Emphasis> and <Emphasis Type="Italic">TC14</Emphasis> wheat lines

Serial passage experiments (SPE) of a Barley yellow dwarf virus-PAV (BYDV-PAV) isolate were performed on Zhong ZH and TC14 wheat lines to evaluate the durability of their resistance to BYDV. At different passage numbers (from the 2nd to the 114th), biological properties of the produced isolates were recorded either by monitoring infection percentages and virus titers of the first 3 weeks of viral infection or by measuring their impact on yield components. Statistical analyses using the area under pathogen progress curves and the area under concentration progress curves demonstrated that these two resistant lines induce, after only a few passages, a selection of variant(s) with significantly modified infection abilities. Isolates resulting from SPE performed on these lines induced important decreases of yield components. These results indicate that the use of Zhong ZH and TC14 lines in BYDV-resistant breeding programmes should be approached with caution.     

Landscape configuration alters spatial arrangement of terrestrial-aquatic subsidies in headwater streams

Context

Freshwater ecosystems depend on surrounding terrestrial landscape for resources. Most important are terrestrial leaf litter subsidies, which differ depending on land use. We lack a good understanding of the variation of these inputs across spatial scales.

Objectives

We sought to determine: (1) the relative importance of local versus catchment-level forestation for benthic leaf litter biomass in streams, (2) how landscape configuration alters these relationships, and (3) how land use affects the quality and diversity of leaf litter subsidies.

Methods

We measured biomass and identity of benthic leaf litter in 121 reaches in 10 independent catchments seasonally over the course of a year. We assessed direct and indirect effects of forestation, reach position, and seasonality on leaf litter biomass using structural equation models, and assessed how leaf litter diversity varied with land use.

Results

In catchments with forested headwaters, the degree of forestation and reach position in the catchment influenced benthic leaf litter biomass indirectly through local reach-scale forestation. In catchments where forest was only located downstream, or with minimal forest, none of these factors influenced reach-level benthic leaf litter. Leaf litter diversity peaked in fall in all land use types, but was generally lowest in forested reaches.

Conclusions

Not only habitat amount, but its location relative to other habitats is important for ecosystem function in the context of cross-ecosystem material flows. Here, lack of upstream forest altered spatial patterns of leaf litter storage. Studies with high spatiotemporal resolution may further reveal effects of landscape configuration on other ecosystems.

     

Landscape ecology: a framework for integrating pattern and process in river corridors

Investigations of European floodplain rivers demonstrate how landscape ecology can provide an effective framework to integrate pattern and process in river corridors, to examine environmental dynamics and interactive pathways between landscape elements, and to develop viable strategies for river conservation. The highly complex and dynamic nature of intact river corridors is particularly amenable to a landscape ecology perspective. Analysis of spatial patterns has provided considerable insight into environmental heterogeneity across river corridors and is an essential prelude to examining dynamic interactions. For example, data from aerial photographs, digitized maps and year-round field measurements in a glacial flood plain, enabled us to distinguish six channel types, based on the correspondence between connectivity and physicochemical attributes. Spatial data were also used to analyze longitudinal changes in landscape elements along the course of a morphologically-intact riverine corridor, providing insight into the structural complexity that must have characterized many Alpine rivers in the pristine state. Landscape indices were employed to investigate seasonal dynamics in a glacial flood plain of the Swiss Alps which exhibits a predictable expansion/contraction cycle, with corresponding shifts in flow paths (surface and subsurface) and water sources (snowmelt, englacial, subglacial, alluvial aquifer, hillslope aquifer). Surface connectivity exhibited an unexpected biphasic relationship with total channel length, whereas riverscape diversity progressively increased along the entire range of channel length. Reconstituting the functional integrity that characterizes intact river corridors should perhaps be the major goal of river conservation initiatives. Although understanding functional processes at the landscape scale is essential in this regard, few data are available. In the Alluvial Zone National Park on the Austrian Danube, three phases of hydrological connectivity were identified (disconnection, seepage connection and surface connection) that corresponded to the predominance of three functional processes (biotic interactions, primary production and particulate transport) within the river corridor.     

Opportunities and Challenges of Carbon Footprint,Climate or CO2 Labelling for Horticultural Products

The number of fruits on the German and European markets with a carbon label is on the increase. This contribution reviews the existing carbon labels by evaluating, categorising and giving background information to provide guidance for labelling home-grown horticultural produce. The existing labels worldwide were classified in 10 categories: (1) CO₂ value; (2) Colour code (with or without CO₂ value); (3) CO₂ reduction (Carbon Trust, Tesco’s, UK) or conversion labels; (4) Climatop for Migros, Switzerland (temporal label for the best product within a product category, e.g., banana, rice, salt); (5) Airfreight labels, e.g., Marks & Spencer’s UK (without further information); (6) ‘Climate, carbon offset or CO₂-neutral’, e.g., NewTree, (only when using gold standard CO₂ emission certificates); (7) unaccounted CO₂ compensation measures (such as planting young trees: ‘CO₂ pineapple’ in Costa Rica); (8) Sustainability labels (ProPlanet, REWE), (9) sustainability reports (printed or online) and (10) QR-Code on the shelf or product to access web-based information. The ‘Pros and Cons’ of the climate labels are compared with respect to the seasonal fruit and vegetables often sold on the markets as lose items and the stakeholder interest. Labelling approaches 4, 8, 9 and 10 appeared suitable for seasonal fruits and vegetables based on criteria such as transparency, clarity, objectivity and integration in the sustainability context. Overall, it is difficult to use labels with a CO₂ value for horticultural products, because (a) the consumer may find it difficult to judge and memorise numeric values, particularly if expressed on different units (e.g. packet size, 1 l, 100 g) and (b) because of the big variation between the farm production systems and the variability between the year to year weather and (c) the consumer may find shopping with a seasonal crop calendar and country of origin label a better choice.     

Secondary siRNAs result from unprimed RNA synthesis and form a distinct class

In Caenorhabditis elegans, an effective RNA interference (RNAi) response requires the production of secondary short interfering RNAs (siRNAs) by RNA-directed RNA polymerases (RdRPs). We cloned secondary siRNAs from transgenic C. elegans lines expressing a single 22-nucleotide primary siRNA. Several secondary siRNAs start a few nucleotides downstream of the primary siRNA, indicating that non-RISC (RNA-induced silencing complex)-cleaved mRNAs are substrates for secondary siRNA production. In lines expressing primary siRNAs with single-nucleotide mismatches, secondary siRNAs do not carry the mismatch but contain the nucleotide complementary to the mRNA. We infer that RdRPs perform unprimed RNA synthesis. Secondary siRNAs are only of antisense polarity, carry 5' di- or triphosphates, and are only in the minority associated with RDE-1, the RNAi-specific Argonaute protein. Therefore, secondary siRNAs represent a distinct class of small RNAs. Their biogenesis depends on RdRPs, and we propose that each secondary siRNA is an individual RdRP product.     

Demonstration of the articular cartilage of the canine ulnar trochlear notch using high-field magnetic resonance imaging

The articular cartilage covering the ulnar trochlear notch (UTN) of both elbow joints from 25 adult canine cadavers was demonstrated by the use of high-field magnetic resonance imaging (MRI) with a fat-suppressed, three-dimensional, spoiled gradient echo sequence. The dogs used for this study were divided into five groups: giant, large, mid-sized, small, and chondrodystrophic breeds. The distribution of articular cartilage of the UTN was assessed on MR images. The joints were then opened, and the distribution of the articular cartilage of the UTN was verified. In 29/50 joints, there was good agreement between gross findings of the distribution of the articular cartilage of the UTN and MRI interpretation. Reasons for the poor results in small and chondrodystrophic breeds were decreased thickness of the articular cartilage, small size of the articular surface and of its structural features, and the frequent inability to visualize the joint space.