Relationships among Pasteurellaceae isolated from free ranging chickens and their animal contacts as determined by quantitative phenotyping, ribotyping and REA-typing

One hundred and forty-three Pasteurella spp. strains and 10 unclassified strains obtained from free ranging poultry, dogs and cats were investigated by extended phenotypic characterization. One hundred and forty-nine of these strains were selected for further studies using ribotyping and REA-typing to evaluate the role of dogs and cats in Pasteurella multocida transmission. Seven and six type strains were included for comparison in phenotyping and genotyping, respectively. Eleven clusters and six unclustered strains were revealed by phenotyping. Ribotyping outlined 12 clusters and six unclustered strains. A correlation between clusters obtained by phenotyping and ribotyping was demonstrated which indicated that a genetic basis exists for clusters outlined by quantitative evaluation of phenotypic data. Similarities and differences in hosts, phenotype, ribotype, and zone of isolation were demonstrated among Pasteurella strains investigated. Isolates of P. multocida from ducks were shown to be clonal by both phenotyping and ribotyping. These strains were identical to one of the chickens strains. REA-typing, however, showed that the chicken strain was different underlining that exchange of clones of P. multocida between avian species rarely happens under village conditions. Management practise in the villages suggest the potential for exchange of P. multocida between poultry and animals kept in contact. The present findings, however, did not indicate that clones of P. multocida are widely exchanged between poultry and other animal species, even though close contact exists. In the present investigation exchange of clones of P. multocida was only demonstrated among animals belonging to the same species. Caution is drawn to the use of ribotyping as the sole method for epidemiological typing and tracing of P. multocida. The present results also underline the importance of proper phenotyping in the identification of P. multocida and related species.     

Anaplasma phagocytophilum in Danish sheep: confirmation by DNA sequencing

Background

The presence of Anaplasma phagocytophilum, an Ixodes ricinus transmitted bacterium, was investigated in two flocks of Danish grazing lambs. Direct PCR detection was performed on DNA extracted from blood and serum with subsequent confirmation by DNA sequencing.

Methods

31 samples obtained from clinically normal lambs in 2000 from Fussingø, Jutland and 12 samples from ten lambs and two ewes from a clinical outbreak at Feddet, Zealand in 2006 were included in the study. Some of the animals from Feddet had shown clinical signs of polyarthritis and general unthriftiness prior to sampling. DNA extraction was optimized from blood and serum and detection achieved by a 16S rRNA targeted PCR with verification of the product by DNA sequencing.

Results

Five DNA extracts were found positive by PCR, including two samples from 2000 and three from 2006. For both series of samples the product was verified as A. phagocytophilum by DNA sequencing.

Conclusions

A. phagocytophilum was detected by molecular methods for the first time in Danish grazing lambs during the two seasons investigated (2000 and 2006).     

Change in lameness risk estimates in piglets due to the modelling of herd-level variation.

In a previous study (Christensen, 1996. Prev. Vet. Med. 26, 107-118), an effect parameter changed from positive to negative depending on the model used. The study considered lameness in suckling piglets and the dataset included 7632 litters from 35 herds from the Health and Production Surveillance (HEPS) system database. To further investigate the change in the effect parameter, we performed a simple test to demonstrate the presence of herd-level variation. Finding substantial herd-level variation, we have re-analysed the data with special attention to the herd-level variation, and how to account for it. When herd-level variation was not accounted for in the model, a detrimental effect of prior treatment of the sow was seen but this turned into a beneficial effect when we accounted for the herd-level variation. The treatment of sow refers to any therapeutic treatment given to the sow after farrowing but before lameness or weaning occurred. This is, therefore, an example where not only the variances but also the effect parameters changed when we accounted for herd-level variation.     

Nitrogen conserving potential of successive ryegrass catch crops in continuous spring barley

Abstract. The nitrogen (N) conserving effects of Italian ryegrass ( Lolium multiflorum L.) undersown as a nitrate catch crop in spring barley ( Hordeum vulgare L.) were evaluated over a ten-year period in outdoor lysimeters (1.5 m deep, diam. 1 m) with sandy loam soil. Spring barley grown every year received 11.0 or 16.5 g N m⁻² before planting or was kept unfertilized. The N was given either as calcium ammonium nitrate or as ammoniacal N in pig slurry. From 1985 to 1989, ryegrass was undersown in the barley in half of the lysimeters while barley was grown alone in the remaining lysimeters. The grass sward was left uncut after barley harvest and incorporated in late winter/early spring. From 1990 to 1994 all lysimeters were in barley only.
Barley dry matter yields and crop N offtakes were not affected by the presence of undersown ryegrass, although grain yields appeared to be slightly reduced. After termination of ryegrass growing, N offtake in barley (grain+straw) was higher in lysimeters in which catch crops had been grown previously.
The loss of nitrate by leaching increased with N addition rate. Regardless of N dressing, ryegrass catch crops halved the total nitrate loss during 1985–1989, corresponding to a mean annual reduction in nitrate leaching of 2.0–3.5 g N m⁻². From 1990 to 1994, lysimeters previously undersown with ryegrass lost more nitrate than lysimeters with no history of ryegrass. The extra loss of nitrate accounted for 30% of the N retained by ryegrass catch crops during 1985–1989.
It is concluded that a substantial proportion of the N saved from leaching by ryegrass catch crops is readily mineralized and available for crop offtake as well as leaching as nitrate. To maximize benefits from ryegrass catch crops, the cropping system must be adjusted to exploit the extra N mineralization derived from the turnover of N incorporated in ryegrass biomass.     

Polycyclic Aromatic Hydrocarbons in the Sediments of the Milwaukee Harbor Estuary, Wisconsin, U.S.A.

From 1990 to 1994, a total of 21 sediment cores and 37 grab sediment samples were collected from the Milwaukee Harbor Estuary. Each sediment core was sectioned and dated using ²¹⁰Pb and¹³⁷ Cs radioisotope techniques. A total of 305 samples were analyzed for sixteen polycyclic aromatic compounds (PAHs). Grain size distribution, porosity, and total organic carbon content as measured by loss on ignition were also determined. The results provide a historical overview of the impact of industrialization in the Milwaukee area. Although highly variable, the concentration profile of PAHs show, in general, peaks in the 1950's through 1980's. The PAH concentrations have declined since then for most sediment cores. The current levels of total PAHs in most surface sediment samples range from 25 to 200 ppm. A few cores, some of which were collected in 1994, have an elevated PAH concentration at the surface. Toxicity of the surface sediments was evaluated by comparing with the benchmark values developed by the United States National Oceanic and Atmospheric Administration (NOAA). The most heavily contaminated area was found in the Kinnickinnic River between the Becher Street Bridge and the Wisconsin Wrecking Company Wharf. The highest total PAH concentration determined from seven vibra cores collected in this area ranges from 380 to 1000 ppm. The former Wisconsin Solvay Coke Company may have been a major point source of PAHs until the 1970's. Highway traffic and various industrial discharges also contribute to the sediment PAHs in this area.     

Fishing down marine food webs

The mean trophic level of the species groups reported in Food and Agricultural Organization global fisheries statistics declined from 1950 to 1994. This reflects a gradual transition in landings from long-lived, high trophic level, piscivorous bottom fish toward short-lived, low trophic level invertebrates and planktivorous pelagic fish. This effect, also found to be occurring in inland fisheries, is most pronounced in the Northern Hemisphere. Fishing down food webs (that is, at lower trophic levels) leads at first to increasing catches, then to a phase transition associated with stagnating or declining catches. These results indicate that present exploitation patterns are unsustainable.