Assessing meiofaunal variation among individuals utilising morphological and molecular approaches: an example using the Tardigrada

Background  

Meiofauna – multicellular animals captured between sieve size 45 μm and 1000 μm – are a fundamental component of terrestrial, and marine benthic ecosystems, forming an integral element of food webs, and playing a critical roll in nutrient recycling. Most phyla have meiofaunal representatives and studies of these taxa impact on a wide variety of sub-disciplines as well as having social and economic implications. However, studies of variation in meiofauna are presented with several important challenges. Isolating individuals from a sample substrate is a time consuming process, and identification requires increasingly scarce taxonomic expertise. Finding suitable morphological characters in many of these organisms is often difficult even for experts. Molecular markers are extremely useful for identifying variation in morphologically conserved organisms. However, for many species markers need to be developed de novo, while DNA can often only be extracted from pooled samples in order to obtain sufficient quantity and quality. Importantly, multiple independent markers are required to reconcile gene evolution with species evolution. In this primarily methodological paper we provide a proof of principle of a novel and effective protocol for the isolation of meiofauna from an environmental sample. We also go on to illustrate examples of the implications arising from subsequent screening for genetic variation at the level of the individual using ribosomal, mitochondrial and single copy nuclear markers.     

Conservation value of forest plantations for bird communities in western Kenya

Tree plantations of native and exotic species are frequently used to compensate for forest loss in the tropics. However, these plantations may support lower species diversity and different communities than natural forest. We therefore investigated bird communities in stands of natural forest, different types of tree plantations and secondary forest in Kakamega Forest, western Kenya. We compared birds differing in habitat specialisation, i.e. forest specialists, generalists, and visitors. We recorded significant differences in mean species richness and number of individuals among the different forest types. Stands of natural forest and plantations of indigenous tree species comprised more species and individuals than plantations of exotic tree species and secondary forest. This was caused by a significant decline of forest specialists and generalists from natural forest and indigenous plantations to exotic plantations and secondary forest. Species composition of the bird communities did not differ between natural forest stands and plantations of a mixture of indigenous tree species, but clearly changed between natural forest and plantations of single tree species. These findings demonstrate that natural forest areas are needed for the conservation of forest bird diversity, but that plantations with a mixture of indigenous tree species can have similarly high conservation value.     

DUPLEX-ULTRASONOGRAPHIC EVALUATION OF THE COMMON CAROTID ARTERY IN THE RESTING, SEDATED AND ANESTHETIZED HORSE

The aim of this study was to determine the blood flow in the carotid artery during halothane anaesthesia by means of duplex-sonography. Seventeen warm blood horses were evaluated in dorsal and lateral recumbency and the results were compared with the values of the same horses resting and under sedation. The cross sectional area of the vessels, the time-averaged maximal blood velocity, time-averaged maximal blood flow and the resistance index were determined and the flow profile was evaluated. During halothane anesthesia the total blood flow shows a significant increase which is not dependent on the positioning of the horse. Mean blood velocity is decreased by sedation and significantly increased during anesthesia. Reduced peripheral resistance is expressed by a decline of the resistance index. After sedation and during recumbency there is an increase in diameter of the carotid artery.     

Soil Conservation in Europe: Wish or Reality?

Nearly all of Europe is affected by soil erosion. A major policy response is required to reverse the impacts of erosion in degraded areas, particularly in light of the current climate change and water crisis. Soil loss occurs not because of any lack of knowledge on how to protect soils, but a lack in policy governance. The average rate of soil loss by sheet and rill erosion in Europe is 2·46 Mg ha⁻¹ yr⁻¹. To mitigate the impacts of soil erosion, the European Union's Common Agricultural Policy has introduced conservation measures which reduce soil loss by water erosion by 20% in arable lands. Further economic and political action should rebrand the value of soil as part of ecosystem services, increase the income of rural land owners, involve young farmers and organize regional services for licensing land use changes. In a changing World of 9 billion people with the challenge of climate change, water scarcity and depletion of soil fertility, the agriculture economy should evolve taking into account environmental and ecological aspects. © 2016 The Authors Journal of Land Degradation & Development Published by John Wiley & Sons Ltd.     

Oceanographic basis of the global surface distribution of Prochlorococcus ecotypes

By using data collected during a continuous circumnavigation of the Southern Hemisphere, we observed clear patterns in the population-genetic structure of Prochlorococcus, the most abundant photosynthetic organism on Earth, between and within the three Southern Subtropical Gyres. The same mechanisms that were previously invoked to account for the vertical distribution of ecotypes at local scales accounted for the global (horizontal) patterns we observed. Basin-scale and seasonal variations in the structure and strength of vertical stratification provide a basis for understanding large-scale horizontal distribution in genetic and physiological traits of Prochlorococcus, and perhaps of marine microbial communities in general.