Imaging bond formation between a gold atom and pentacene on an insulating surface

A covalent bond between an individual pentacene molecule and a gold atom was formed by means of single-molecule chemistry inside a scanning tunneling microscope junction. The bond formation is reversible, and different structural isomers can be produced. The single-molecule synthesis was done on ultrathin insulating films that electronically isolated the reactants and products from their environment. Direct imaging of the orbital hybridization upon bond formation provides insight into the energetic shifts and occupation of the molecular resonances.     

Long-term dynamics of leaf and root decomposition and nitrogen release in a grey alder (Alnus incana (L.) Moench) and silver birch (Betula pendula Roth.) stands

The decomposition of the leaf litter, fine roots (d?<?2?mm) and coarser roots (2?≤?d?<?5?mm) of grey alder and silver birch, as well as of α-cellulose sheets using the litterbag method was studied in two experimental stands on Podzoluvisol soils in Southern Estonia. For both tree species, the coarser roots decomposed faster than the fine roots, (p?<?.05), tree species did not affect the decomposition rate of the roots (p?>?.5). The nitrogen (N) input to soil from aboveground litter was multiple times higher than the N flux from roots. The remaining relative ash-free mass of the leaves of grey alder and silver birch after three and a half years was similar. After 11 years the remaining relative ash-free mass of the fine and coarser roots of grey alder still accounted for around 10% of the initial value. For silver birch the remaining value was around 20% after 9 years. The litterbag method to underestimates in fertile soils the decomposition of organic matter and thus did not reflect the actual dynamics of decomposition.     

Adaptation of regional digital soil mapping for precision agriculture

In the initial phase of a national project to map clay, sand and soil organic matter (SOM) content in arable topsoil in Sweden, a study area in south-west Sweden comprising about 100 000 ha of arable land was assessed. Models were created for texture, SOM and two estimated variables for lime requirement determination (target pH and buffering capacity), using a data mining method (multivariate adaptive regression splines). Two existing reference soil datasets were used: a grid dataset and a dataset created for individual farms. The predictor data were of three types: airborne gamma-ray spectrometry data, digital elevation from airborne laser scanning, and legacy data on Quaternary geology. Validations were designed to suit applicability assessments of prediction maps for precision agriculture. The predictor data proved applicable for regional mapping of topsoil texture at 50 × 50 m² spatial resolution (root mean square error: clay = 6.5 %; sand = 13.2 %). A novel modelling strategy, ‘Farm Interactive’, in which soil analysis data for individual farms were added to the regional data, and given extra weight, improved the map locally. SOM models were less satisfactory. Variable-rate application files for liming created from derived digital soil maps and locally interpolated soil data were compared with ‘ground truth’ maps created by proximal sensors on one test farm. The Farm Interactive methodology generated the best predictions and was deemed suitable for adaptation of regional digital soil maps for precision agricultural purposes.     

Precision agriculture research in sub-Saharan Africa countries: a systematic map

Precision agriculture (PA) has a huge potential for growth in sub-Saharan Africa (SSA), but it faces a number of social-economic and technological challenges. This study sought to map existing PA research and application in SSA countries following the methodology for systematic mapping in environmental sciences. After screening for relevance, the initial about 7715 articles was reduced to 128. Results show that most of the studies were conducted in countries with socio-economic and technological advancement, mainly South Africa followed by Nigeria and Kenya. The studies were conducted at various scales ranging from field to country level with field scale studies being the most common. Most studies were conducted in relatively small farms typical of most farmlands in SSA. Studies done in relatively large farms are fewer, and such farms would likely belong to a few organisations and individuals with high economic capacity. Many of these studies have been conducted by researchers from outside SSA and a combination of researchers from within and outside SSA. However, based on authorship of the articles, it appears that most of the studies conducted in SSA on precision agriculture have either involved or depended on non-African researchers. It is concluded that there have been significant strides towards use of precision agriculture in SSA. However, with about 21 countries having no research done, there exists greater potential for precision agriculture in the region. Besides, there is need for more research to investigate the low usage of precision agriculture for livestock management.

     

Influence of soil mineralogy and chemistry on site quality within geological regions in Sweden

The relationship between soil properties and forest site quality was investigated. The site quality functions currently used fail in predicting variations within regions and the purpose of this study was to evaluate if the local accuracy in forest resource assessments could benefit from the use of geological and geochemical data. The investigation was conducted in mid-Sweden within two geological regions. The mineralogy of the parent material (C horizon) was estimated using a method for normative mineralogical assessment and the soil chemistry was determined for five soil horizons. The importance of individual minerals for site quality was different within the two geological regions. Functional relations were established between the properties in different soil horizons and site index. The functions between mineralogy and site index were improved by splitting the data according to the geologically different regions. The mineralogy explained 37–61% of the variation in site index, whereas the properties in the upper soil profile (O–B horizon) related more strongly to site index (18–80%). Stronger relations could be established in the mineralogically rich than in the mineralogically poor area.     

Local water vapor diffusion coefficient when drying Norway spruce sapwood

In this article, a one-dimensional and a two-dimensional approach to the evaluation of local diffusion coefficients for Norway spruce sapwood from measured moisture content (MC) values are presented. A studied wood sample was dried from the initial green condition to about 15% mean MC, but here only the diffusive part of the drying process between approximately 25% and 15% mean MC was treated. Measured local MC values were based on nondestructive X-ray computed tomography data. Finite element calculations were performed with two alternative diffusion coefficients to test the appropriateness of the diffusion coefficients that were evaluated from the measured MC values. The evaluated diffusion coefficients show interesting dependence on MC and distance from the evaporation surface. The advantage of using the methods presented is that the diffusion coefficient is calculated on a local level without having to define a function for the diffusion coefficient’s dependency on other parameters.     

Recent (<4 year old) leaf litter is not a major source of microbial carbon in a temperate forest mineral soil

Microbial communities in soil A horizons derive their carbon from several potential sources: organic carbon (C) transported down from overlying litter and organic horizons, root-derived C, or soil organic matter. We took advantage of a multi-year experiment that manipulated the ¹⁴C isotope signature of surface leaf litter inputs in a temperate forest at the Oak Ridge Reservation, Tennessee, USA, to quantify the contribution of recent leaf litter C to microbial respiration and biomarkers in the underlying mineral soil. We observed no measurable difference (<∼40‰ given our current analytical methods) in the radiocarbon signatures of microbial phospholipid fatty acids (PLFA) isolated from the top 10 cm of mineral soil in plots that experienced 3 years of litterfall that differed in each year by ∼750‰ between high-¹⁴C and low-¹⁴C treatments. Assuming any difference in ¹⁴C between the high- and low-¹⁴C plots would reflect C derived from these manipulated litter additions, we estimate that <∼6% of the microbial C after 4 years was derived from the added 1-4-year-old surface litter. Large contributions of C from litter < 1 year (or >4 years) old (which fell after (or prior to) the manipulation and therefore did not differ between plots) are not supported because the ¹⁴C signatures of the PLFA compounds (averaging 200-220‰) is much higher that of the 2004-5 leaf litter (115‰) or pre-2000 litter. A mesocosm experiment further demonstrated that C leached from ¹⁴C-enriched surface litter or the O horizon was not a detectable C source in underlying mineral soil microbes during the first eight months after litter addition. Instead a decline in the ¹⁴C of PLFA over the mesocosm experiment likely reflected the loss of a pre-existing substrate not associated with added leaf litter. Measured PLFA Δ¹⁴C signatures were higher than those measured in bulk mineral soil organic matter in our experiments, but fell within the range of ¹⁴C values measured in mineral soil roots. Together, our experiments suggest that root-derived C is the major (>60%) source of C for microbes in these temperate deciduous forest soils.     

Risk factors associated with fecal Salmonella shedding among hospitalized horses with signs of gastrointestinal tract disease

OBJECTIVE: To estimate prevalence of and identify risk factors for fecal Salmonella shedding among hospitalized horses with signs of gastrointestinal tract disease. DESIGN: Cross-sectional study. ANIMALS: 465 hospitalized horses with gastrointestinal tract disease. PROCEDURE: Horses were classified as positive or negative for fecal Salmonella shedding during hospitalization by means of standard aerobic bacteriologic methods. The relationship between investigated exposure factors and fecal Salmonella shedding was examined by means of logistic regression. RESULTS: The overall prevalence of fecal Salmonella shedding was 13%. Salmonella serotype Newport was the most commonly isolated serotype (12/60 [20%]), followed by Anatum (8/60 [13%]), Java (13%), and Saint-paul (13%). Foals with gastrointestinal tract disease were 3.27 times as likely to be shedding Salmonella organisms as were adult horses with gastrointestinal tract disease. Adult horses that had been treated with antimicrobial drugs prior to hospitalization were 3.09 times as likely to be shedding Salmonella organisms as were adult horses that had not been treated with antimicrobial drugs prior to hospitalization. Adult horses that underwent abdominal surgery were 2.09 times as likely to be shedding Salmonella organisms as were adult horses that did not undergo abdominal surgery. CONCLUSIONS AND CLINICAL RELEVANCE: Results suggest that a history of exposure to antimicrobial drugs prior to hospitalization and abdominal surgery during hospitalization were associated with Salmonella shedding in adult horses with gastrointestinal tract disease. Foals with gastrointestinal tract disease were more likely to shed Salmonella organisms than were adult horses with gastrointestinal tract disease.     

A semantic model for assessing the experience of urban biodiversity

Biodiversity is a significant element of our everyday experience of urban environments, though it is generally only perceived subconsciously. Thus, there is a need to develop a method for defining and measuring experienced biodiversity. As a first step towards such a method, a semantic test was presented to a group of 102 participants. The test consisted of a form containing words/expressions selected as possible components of biodiversity. The participants rated the words on a five-grade scale, and the form was completed at six different study sites. Statistical analyses indicated that words with biological content were strongly correlated with biodiversity, as were words associated with wilderness and variation. Correlations with words of preference were less strong. Following factor analysis, a biodiversity experience index was calculated based on the factor loadings of words strongly correlated with biological diversity. The index was then calculated for all six sites. It was suggested that the index, by measuring words/expressions with higher linguistic codability, offers a valuable tool for assessing experienced biodiversity. It was further concluded that areas containing spontaneous vegetation and water obtained higher biodiversity index scores than did areas characterized by a short-cut lawn and more uniform vegetation.     

Evaluation of a Radioimmunoassay Technique Measuring Calcitonin in The Bovine,Ovine and Porcine Species

A heterologous RIA system was set up for measuring bovine, ovine and porcine calcitonin (CT). The system consisted of porcine GT used as standard and for the preparation of an iodinated tracer. The antiserum used was raised against ovine GT. For each analysis was used 25–200 µl blood plasma. Practical detection limit was 0.25 µg of CT per litre of blood plasma.The parallelism between the dose response curves for the p-GT standard and for the assay of increasing amounts of bovine, ovine and porcine blood plasma showed the suitability of the present assay system to study the GT secretion in these species. Furthermore, the reliability of the method was verified by a clearly recognized CT response to calcium infusion.