秦川牛近交与近交衰退的分析

本文分析了陕西省秦川牛场秦川牛群近交及其对初生重、断奶重及哺乳期成活率的影响,并采用标准群体遗传学模型分析了秦川牛的致死当量。研究发现,30多年来秦川牛群平均近交系数呈明显的上升趋势,而且近交对成活率、初生重及断奶重均有一定危害;秦川牛群体的隐性有害基因含量较少,平均每个个体约携带2.05个致死当量。     

正反反复选择下近交对褐壳蛋鸡饲料利用率和繁殖性状的影响

本文估计了褐壳蛋鸡洛岛红(AA)和浅花苏赛克斯(BB)在正反反复选择(RRS)下的近交系数,分析了近交对选择标准饲料利用率及其相关性状和繁殖性状的影响。试验群体由两纯种及其正反交组合和相应的对照组组成。经过7个世代的RRS和近交试验,试验组AA和BB(括弧里为对照组1AA和1BB)用系谱材料计算出的平均累积近交系数分别为2.58％和3.23％(9.33和8.17%)或每代为0.43%(1.35%),用有效群体含量估计出的AA与BB的相应数值为2.91％与2.83％(5.84%与5.92％)或每代为0.42％(0.86％)。1％近交系数导致的孵化率和饲料利用率的近交衰退较严重(0.5％和0.4％),其次是产蛋性状(约0.3％),而体重和蛋重只有0.1％左右。在本研究中,通过连续7代的RRS与合适的留种率等措施,成功地将闭锁群体的近交系数控制在3%以下的低水平,消除或减轻了近交对饲料利用率等重要经济性状的不利影响。     

苎麻自交一代分离和变异的研究

1983～1985年以“黄壳早”、“芦竹青”、“古巴苎麻”和“武冈红皮种”为材料进行自交,并观测了自交一代的分离和变异情况,研究结果表明:a.根据自交一代的形态分类,可将“芦竹青”繁殖后代分为40个类型,“芦竹青”自交一代的麻骨颜色分离为四种,其分离比例为9.3:4.2:3:0.7,基本符合孟德尔遗传规律;b.个体间产量性状差异很大,株高变冥为0.23～1.68m,茎粗变异为0.48～1.14 cm,有效株变异为1～23株;c.40个类型的纤维细度的变异呈正态分布,变异为1168～1905公支,最细的类型和最粗的类型相差747支上述结果表明:苎麻自交后代的形态性状、产量性状和纤维细度均产生显著的分离和差异。     

Persimmon breeding in Japan for pollination-constant non-astringent (PCNA) type with marker-assisted selection

Oriental persimmon (Diospyros kaki) originated in Eastern Asia, and many indigenous cultivars have been developed in China, Japan, and Korea. These cultivars are classified into four groups based on their natural astringency loss on the tree and seed formation: pollination-constant non-astringent (PCNA), pollination-variant non-astringent (PVNA), pollination-constant astringent (PCA), and pollination-variant astringent (PVA). PCNA is the most desirable type because the fruit can be eaten without any postharvest treatment; therefore, one of the goals of our persimmon breeding programs is to release superior PCNA cultivars. The PCNA genotype is recessive to the other three non-PCNA genotypes, and PCNA-type F₁ offspring are obtained exclusively from crosses among PCNA genotypes. Moreover, the number of superior PCNA cross-parents have been limited. In the late 1980s, inbreeding depression became obvious, especially in terms of fruit size, tree vigor, and productivity. To mitigate the inbreeding, a backcross program using PCNA [(non-PCNA × PCNA) × PCNA] was started in 1990. This process, however, was inefficient because only 15% of the offspring were PCNA, and all offspring had to be grown to the fruiting stage. Therefore, molecular markers linked to the PCNA locus were developed for discriminating PCNA offspring. A molecular marker linked to Chinese PCNA has also been developed.     

鸡繁殖性能近交衰退相关CpG岛差异甲基化基因的筛选

鸡繁殖性能近交衰退是地方鸡遗传资源活体保种过程中面临的重要问题之一,本研究旨在探讨全基因组CpG岛（CpG island,CGI）区DNA甲基化在鸡繁殖性能近交衰退中的作用。分别从狼山鸡高近交组和低近交组中各选取健康母鸡3只,即试验分2个组,每组3个重复,然后采用全基因组重亚硫酸盐测序（WGBS）技术,检测分析两组个体性腺轴组织（包括卵巢和下丘脑）全基因组DNA甲基化差异,筛选差异甲基化区域（DMRs）,并对CpG岛区差异甲基化基因进行功能注释和富集分析。结果表明,狼山鸡高近交组和低近交组比较,其卵巢和下丘脑基因组整体甲基化水平均不存在显著差异（P>0.05）;高、低近交组间差异甲基化区域检测发现,下丘脑和卵巢中分别检测到5 948和4 593个差异甲基化区域,其中1 798和995个差异甲基化区域位于基因组CpG岛区,分别注释到1 020和552个基因;下丘脑中,这些CpG岛区差异甲基化基因显著富集在信号转导、神经系统发育、生殖系统发育和卵母细胞成熟调控等繁殖相关的GO条目,以及转化生长因子β信号通路、乙型肝炎、脂肪酸代谢、胰岛素信号通路等19条KEGG信号通路（P<0.05）;卵巢中,CpG岛区差异甲基化基因显著富集于12条信号通路（P<0.05）,包括慢性骨髓白血病、流感A、精氨酸和脯氨酸代谢、粘着连接等,一些与卵子发育和性激素分泌相关的信号通路也被富集到,如黄体酮介导的卵母细胞成熟、卵母细胞减数分裂、GnRH信号通路、雌激素信号通路等,其中包含CDC27、ADCY8、AKT3等10个差异甲基化基因。因此,本研究在狼山鸡高、低近交组间检测到了大量差异甲基化区域,并发现大量差异甲基化基因与繁殖性状相关,推测这些基因CpG岛区DNA甲基化可能在狼山鸡繁殖性能近交衰退调控中发挥重要作用,研究结果为进一步深入探索鸡繁殖性能近交衰退调控机制奠定了基础,为物种资源保护和家禽育种工作提供了理论参考依据。     

日光温室茄子冠气温差与环境因子之间的关系研究

系统地研究了日光温室内茄子冠气温差的变化规律与环境因子之间的关系,运用回归方法建立了主要气象因子与冠气温差之间的数量关系。深入分析了不同土壤水分条件下日光温室内茄子冠气温差与土壤含水量的关系,并建立了二者之间的相关方程,得出了诊断茄子水分状况的指标。     

Between-founder heterogeneity in inbreeding depression for production in Jersey cows

Severity of inbreeding depression depends on the hidden (i.e., recessive) genetic load carried by a population. If the load is distributed unevenly among founder genomes, or founder-lines were exposed to variable amounts of selection, descendants from different founders may be differentially affected by inbreeding. Between-founder heterogeneity in inbreeding depression for production traits and somatic cell score in milk (SCS) was studied using records from 59,788 Jersey cows. Inbreeding coefficients (F) were partitioned into components due to four founders, plus a remainder. A two-stage statistical analysis was performed. First, empirical best linear unbiased predictions (EBLUP) of residuals for milk, fat and protein yield, and for SCS, were computed using linear models including fixed effects of herd–year–season, age at calving and days in milk, and random additive genetic effects of individual cows. Second, models with total and partial inbreeding coefficients as predictor variables were fitted to EBLUP residuals, for each trait. Tests of differences between slopes indicated that regressions of milk, fat and protein yield on partial inbreeding coefficients were heterogeneous; SCS did not exhibit inbreeding depression. Hence, alleles contributing to inbreeding depression for production in this Jersey population seem to be associated with specific founders. This indicates that a homogeneous effect of inbreeding on production may be an incorrect statistical specification in genetic evaluation models that attempt to account for inbreeding depression. Furthermore, the observed variability between effects of partial inbreeding due to different founders implies that inbreeding effects on yield traits may be due to alleles with major effects.     

反式脂肪酸降低乳脂合成的机理

乳中的反式脂肪酸直接来源于日粮脂肪或由瘤胃微生物氢化生成,本文重点介绍了反10-油酸和反10,顺12-共轭亚油酸两种不同反式脂肪酸对乳脂合成的影响,讨论了反式脂肪酸影响乳脂合成的机理,可能是反式脂肪酸通过抑制乳腺中脂肪酸合成的关键酶乙酰辅酶A羧化酶和脂肪酸合成酶的活性,进而导致乳脂合成的减少。     

Approaches to the management of inbreeding and relationship in the German Holstein dairy cattle population

The aim of this study was to estimate the current level of inbreeding in the German cow population and for bull dams born in Germany, to find out sires most related to different subsets of their breed and to demonstrate the negative effect of homozygosity in the case of complex vertebral malformation (CVM). Further on, the application of optimum genetic contribution (OGC) theory for the selection of bull dams and bull sires in different breeding scenarios was investigated. Levels of inbreeding for the cow population were in a low range from 0.97% to 1.70% evaluating birth years from 1996 to 1999 in a total dataset of 244,427 registered Holstein cows. The inbreeding coefficient of 8030 bull dams was much higher, i.e. 3.71%, for the birth year 1999. Increases in inbreeding of 0.19% per year indicated an effective population size of only 52 animals. Individual sires like R.O.R.A. Elevation and Hannoverhill Starbuck were highly related to potential bull dams with coefficients of relationship of 13.4% and 12.9%, respectively, whereas P.F. Arlinda Chief (16.3%) and Carlin-M Ivanhoe Bell (16.1%) were highest related to the best available AI sires. Coefficients of relationship were calculated by classes of estimated breeding values (EBV) for production traits showing highest values above 7% in the two highest EBV-classes. The optimum genetic contribution theory using official EBVs and approximative, for zero inbreeding corrected EBVs, was applied for elite matings in a breeding program embracing 30 young bulls per year to find the optimal allocations of bull sires and bull dams. Compared with the actual breeding program applied in practice, OGC-theory has the potential to increase genetic gain under the same constraint for the increase of average relationship by 13.1%. A more relaxed constraint on increase in inbreeding allowed even higher expected genetic gain whereas a more severe constraint resulted in more equal contributions of selected bull sires. Contributions from 21 selected bull sires and 30 selected bull dams for a scenario at 5% constrained relationship were used to develop a specific mating plan to minimise inbreeding in the short term in the following generation applying a simulated annealing algorithm. The expected coefficient of inbreeding of progeny was 66.3% less then the one resulting from random mating. Mating programs can address inbreeding concerns on the farm, at least in the short term, but long-term control of inbreeding in a dairy population requires consideration of relationships between young bulls entering AI progeny test programs. Significantly better EBVs of CVM-free bulls compared with CVM-carriers for the paternal fertility justify the application of OGC for elite matings.