Genotypic Variability in Biomass Protein and Nucleic Acids in Four Linum Species to Sodicity Stress

Differences in gas exchange parameters i.e. carbon exchange rate (CER), transpiration (Tr), water vapor conductance (g) were investigated, under a controlled environment, in a semi-dwarf (SD) Triticum aestivum line, its tall (TL) near isoline and the Payne (PA) variety characterized by small leaves. The plants were maintained in: (a) optimal substrate moisture condition (CTR); (b) salinized by watering with a 0.12 m NaCl solution (SLT); (c) water stressed by withholding waterings during a period of six days (STR); (d) stressed and salinized during the same period and with the same saline solution (S + S). CER and Tr were negatively affected by the stresses; SLT and S + S treatments had a higher WUE compared to their respective controls CTR and STR.
SD line had a better performance in terms of CER and WUE, particularly when water and salt stresses interacted. Leaf anatomy and assimilation/internal CO₂ concentration curves contributed to explaining the SD performance.     

Salinity Effects on the Growth and Ion Contents of Some Chickpea (Cicer arietinum L.) and Lentil (Lens culinaris Medic.) Varieties

The effect of salinity on seed germination, plant yield parameters, and plant Na, Cl and K concentrations of chickpea and lentil varieties was studied. Results showed that in both crops percentage emergence was significantly reduced by increasing NaCl levels (0–8dSm^?1). From the plant growth studies it was found that differences existed among chickpea and lentil varieties in their response to NaCl application. In chickpea, the variety Mariye showed the comparatively lowest germination percentage and the lowest seedling shoot dry weight in response to salinity and was also among the two varieties which had the lowest relative plant height, shoot and root dry weight and grain yield at maturity. Similarly, variety DZ-10-16-2, which was the second best in germination percentage and the highest in terms of seedling shoot dry weight, also had the highest relative plant height, shoot and root dry weights, and grain yield at maturity. In lentil, however, such relationships were less pronounced. Chloride concentration (mg g^?1) in the plant parts at salt levels other than the control was about 2–5 times that of Na. K concentration in the plants was significantly reduced by increasing NaCl levels. Chickpea was generally more sensitive to NaCl salinity than lentil. While no seeds were produced at salinity levels beyond 2dSm^?1 in chickpea (no seeds were produced at this salt level in the most sensitive variety, Mariye), most lentil varieties could produce some seeds up to the highest level of NaCl application. Overall, varieties R-186 (lentil) and Mariye (chickpea) were the most sensitive of all varieties. On the other hand, lentil variety NEL-2704 and chickpea variety DZ-10-16-2 gave comparatively higher mean relative shoot and root dry weights, and grain yield, thus showing some degree of superiority over the others. The observed variations among the varieties may be useful indications for screening varieties of both crops for salt tolerance.     

Influence of Low Light Irradiance on Grain Filling in Rice (Oryza saliva L.) cultivars

Time course of grain filling pattern in two rice (Oryza sativa L.) cultivars, grown under normal and low light intensities, was studied. The number of spikelets, partially filled grains and high density grains were monitored at a 5 day interval during grain filling period from uniform panicles tagged at anthesis. The low light tolerant cultivar Swarnaprabha had more high density grains and less partially filled grains throughout the grain filling period and at harvest compared to cultivar Ratna under both normal and low light intensities. Further, the opening of spikelets in two flushes in Swarnaprabha seemed to result in a more efficient resource allocation and hence better yield as compared to Ratna, in which the opening of spikelets was in a single flush on day 10.     

Impact of pig slurry on soil properties, water salinization, nitrate leaching and crop yield in a four-year experiment in Central Spain

Abstract. The repeated application of pig slurry to agricultural soils may result in an accumulation of salts and a risk of aquifer pollution due to nitrate leaching and salinization. Under Mediterranean conditions, a field experiment on a sandy loam soil (Typic Xerofluvent) was performed with maize (Zea mays) in 1998, 1999 and 2001 to study the effects of applying optimal (P1) and excessive rates (P3) of pig slurry on soil salinization, nitrate leaching and groundwater pollution. The rate of pig slurry was established considering the optimal N rate for maize in this soil (170, 162 and 176 kg N ha^?1 for 1998, 1999 and 2001, respectively). Pig slurry treatments were compared to an optimal N rate supplied as urea (U) and a control treatment without N fertilizer (P0). The composition of the slurries showed great variability between years. Mean NO₃^? leaching losses from 1998 to 2001 were 329, 215, 173 and 78 kg N ha^?1 for P3, P1, U and P0 treatments, respectively. The amount of total dissolved salts (TDS) added to the soil in slurry application between 1998 and 2001 was 2019 kg TDS ha^?1 for the P1 treatment and 6058 kg TDS ha^?1 for the P3 treatment. As a consequence, the electrical conductivity (EC) of the slurry‐treated soils was greater than that of the control soil. The EC correlated significantly with the sodium concentration of the soil solution. Over the entire experimental period, 2653, 2202 and 2110 kg Na ha^?1 entered the aquifer from the P3, P1 and P0 treatments, respectively. The P3 treatment did not significantly increase grain production in 1999 and 2001 compared with that achieved with the optimal N rate treatment (P1). This behaviour shows the importance of establishing application guidelines for pig slurry that will reduce the risk of soil and groundwater pollution.     

不同缢蛏群体应对高盐养殖环境的潜沙和摄食响应能力

为研究缢蛏(Sinonovacula constricta)生态行为应对高盐养殖环境的响应能力,以2个缢蛏群体(“申浙一号”群体SZSC和自然群体ZRSC)为实验对象,研究了不同盐度(20、24、28和32)对缢蛏群体潜沙行为、摄食生理的影响。对比2个群体潜沙指标和摄食率(FR)的差异,其中,潜沙行为实验设置盐度应激组(缢蛏从暂养池取出放进各盐度组开始实验)和胁迫组(缢蛏在各盐度条件下胁迫24 h后开始实验)。结果显示,SZSC的120 h半致死盐度为34.04,ZRSC的120 h半致死盐度为32.04。应激组中,SZSC的半数潜沙时间(BT50)显著大于ZRSC (P<0.05),盐度为24时,SZSC的BT50为4.2 min,显著低于盐度为28和32时的BT50;盐度为32时,SZSC潜沙深度分布更集中,潜沙率为88.33%,显著高于ZRSC(P<0.05)。而在胁迫组,SZSC中BT50显著低于ZRSC,潜沙率显著大于ZRSC (P<0.05)。摄食生理上,除对照组外,SZSC的FR均显著大于ZRSC(P<0.05),SZSC的FR在盐度为24时达到最大值[89.54 mL/(g·h)],显著大于其他盐度组(P<0.05)。研究表明,2个群体的生态行为均会受到盐度的影响,盐度越高,应激反应越强烈,其中,SZSC对高盐环境具有较好的耐受性。本研究从生态行为水平评估了2个缢蛏群体对高盐环境的耐受性,揭示了高盐养殖环境下缢蛏在底泥中的垂直分布情况和摄食能力,研究结果为进一步开展缢蛏耐高盐新品系的选育提供了理论参考。     

基于转录组的疏花软紫草低拷贝核基因引物开发

基于高通量的转录组测序,为大量并快速的开发分子标记提供契机。本研究对紫草科植物疏花软紫草进行转录组测序,共得到92042086条reads,从疏花软紫草158446个Unigene中搜索到332个低拷贝核基因。为进行多态性验证,从中随机挑选30个设计引物,并对3个疏花软紫草种群共9个个体进行PCR扩增,结果发现其中16对引物能够扩增出单一稳定的目的条带,从中随机挑选7个片段进行群体测序并计算DNA多态性。结果表明,7对引物的多态性位点平均值为657,单倍型平均值为514,单倍型多态性 （HD） 在0389~0944之间,核苷酸多态性 （Pi） 为000148~001723。通过转录组测序技术开发的低拷贝核基因有较高的多态性,且可以有效地运用于群体遗传学和谱系地理学研究中。另外,这些低拷贝核基因能够被运用于软紫草属植物系统发育重建以及物种形成等研究工作中。     

A nutritional disorder in pistachio from near Athens,Greece

Abstract

A problem pistachio orchard near Athens, Greece had many trees with severely scorched leaves. Half or more of each leaflet v/as brown and dry but tips and edges were most affected. Affected leaves were also of lighter green color than normal leaves and slightly resembled Fe deficiency. Leaf analysis indicated low K, low Fe, and high Mg. Irrigation water contained moderate levels of Mg and Na chlorides and chloride toxicity was possibly another factor. Improvement was observed when Fe chelate was applied to the orchard but Mg‐induced K deficiency was possibly a major factor. Response to K applied to soil was not observed after four months, however.     

A highly sensitive,non‐invasive qPCR‐based strategy for direct quantification of Yersinia ruckeri in fish faeces

Finfish with asymptomatic Yersinia ruckeri infections pose a major risk as they can transmit the pathogen and cause clinical outbreaks in stock populations. Current tools have insufficient quantitative ability for accurately detecting the trace levels of Y. ruckeri typically associated with asymptomatic infection, necessitate invasive or lethal sampling, or require long processing times. This study presents a highly sensitive qPCR‐based method, targeting part of the Y. ruckeri 16S rRNA sequence, that is capable of detecting extremely low levels of Y. ruckeri in noninvasively collected faecal samples. Quantitative precision and accuracy of faecal sample analysis was consistent, despite the complexity of the faecal matrix. The assay demonstrated linearity over a six log‐wide dynamic range. Its limit of detection (LOD) and limit of quantification (LOQ) were 4 and 10 copies of the target sequence, respectively. Sensitivity of the assay was comparable to other qPCR‐based methods without requiring invasive or lethal sampling. Applicability as a screening strategy was tested using passively collected faecal samples. Asymptomatic Y. ruckeri infection was detected in all samples, although none of the fish exhibited overt infection. This method will be beneficial for finfish disease management if developed further as a noninvasive, screening tool against asymptomatic Y. ruckeri infection.     

Mapping genomic regions for reproductive traits in beef cattle: Inclusion of the X chromosome

Although the second largest chromosome of the genome, the X chromosome is usually excluded from genome-wide association studies (GWAS). Considering the presence and importance of genes on this chromosome that are involved in reproduction, the aim of this study was to evaluate the effect of its inclusion in GWAS on reproductive traits (scrotal circumference [SC], early pregnancy [P16] and age at first calving [AFC]) in a Nelore herd. Genotype data from 3,263 animals with the above-mentioned phenotypes were used. The results showed an increase in the variances explained by the autosomal markers for all traits when the X chromosome was not included. For SC, there was an increase of more than 10% for the windows on chromosomes 2 and 6. For P16, the effect was increased by almost 20% for windows on chromosome 5. The same pattern was found for AFC, with an increase of more than 10% for the most important windows. The results indicate that the noninclusion of the X chromosome can overestimate the effects of autosomes on SC, P16 and AFC not only because of the additive effect of the X chromosome itself but also because of its epistatic effect on autosomal genes.