Potential plant–aphid–fungal associations aiding conservation biological control of cereal aphids in Argentina

The overall aim of this study was to identify potential associations between aphids and plants as reservoirs of entomophthoralean fungi. A survey of weeds associated with wheat field borders in two different localities was performed over two years, from April 2010 to April 2012 in the Pampeana central region, Argentina. On each sampling date, five individuals of each plant species were randomly selected, and healthy and infected aphids were collected and quantified once a month. The taxonomic identities of both aphid hosts and entomophthoralean fungi were established. Aphid–fungus associations identified as favorable for inclusion in conservation biological control strategies in borders of wheat crops are the following: Sonchus oleraceus (L.)/Hyperomyzus carduellinus (Theobald), Uroleucon sonchi (L.)/Pandora neoaphidis (Remaudière & Hennebert) Humber; S. oleraceus (L.)/H. carduellinus (Theobald)/Zoophthora radicans (Brefeld) Batko; Lamium amplexicaule (L.)/Cryptomyzus korschelti Bôrner/P. neoaphidis, Z. radicans, Entomophthora planchoniana Cornu; Foeniculum vulgare (Miller)/Dysaphis apiifolia (Theobald)/Z. radicans; Morrenia brachystephana Griseb/Aphis nerii Boyer de Fonscolombe/P. neoaphidis and Brassica rapa L./Brevicoryne brassicae (L.)/P. neoaphidis.     

Johan Dekker, professor of plant pathology at the Wageningen Agricultural University, 1969–1989

Johan Dekker, born 26 november 1925, in's Heerenhoek (on the island Zuid Beveland in the southwest of the Netherlands), grew up in a rural environment and was initiated in all farming practices. He went to grammar school (gymnasium ) during the turbulent years of the Second World War and graduated in 1945. He continued his education at the Wageningen Agricultural University, where he chose Tropical Agronomy as a major and Phytopathology as a minor. The academic studies were interrupted to do military service (1947–1950; reserve officer), which in the unstable post-war period required many years. The then mature student apparently became fascinated with phytopathology, as testifies his undergraduate thesis onRhabdospora ramealis (purple blotch, nowR. ruborum) as the causal agent of a blueberry disease, but he did not forget about his major, vide the literature review on rubber mildew (Oidium heveae) which would have fit in the Annual Review of Phytopathology as to thoroughness and number of references. Did his student work already indicate Dekker's abilities as an editor and review writer?Johan Dekker werd geboren op 26 november 1925 en groeide op in een agrarisch milieu. Na zijn gymnasium-opleiding studeerde hij Tropische Landbouw aan de Landbouwhogeschool, met Fytopathologie als bijvak. In 1953 behaalde hij zijn ingenieursdiploma, in 1957 zijn doctorsbul. Zijn gehele carrière speelde zich af binnen wat nu de Vakgroep Fytopathologie heet en was steeds gericht op Interne Therapie door middel van chemotherapeutica (w.o. antibiotica) en resistentiebevordering. In 1969 aanvaarde Johan Dekker het ambt van gewoon hoogleraar in de Fytopathologie. Onderwijs en onderzoek kwamen tot grote bloei onder zijn leiding. Hij had de hand in enkele patenten, meer dan 90 publikaties, en meer dan 20 proefschriften. Dekker had grote bestuurlijke belangstelling en vervulde vele bestuursfuncties, universitair, nationaal en internationaal. Zijn bijdragen tot de gewasbescherming zijn internationaal zeer gewaardeerd, zoals blijkt uit drie zeldzame internationaal-wetenschappelijke onderscheidingen. In 1989 werd Johan Dekker benoemd tot ridder in de Orde van de Nederlandse Leeuw.     

Powdery mildew of Arabidopsis thaliana: a pathosystem for exploring the role of silicon in plant–microbe interactions

Silicon (Si) has been used in agriculture to protect plants against disease for hundreds of years and its prophylactic effects in monocots and dicots are well documented. The mechanisms by which Si exerts its protective effects in planta, however, are uncertain and presently the subject of debate. In this study, we sought to determine if Arabidopsis thaliana could be used to clarify the role of Si in plant–pathogen interactions. Accordingly, X-ray microanalysis mapping, light microscopy, scanning and transmission electron microscope techniques were used to examine the leaves of Si− fed A. thaliana plants inoculated with the powdery mildew fungus, Erysiphe cichoracearum. The results of this study demonstrate for the first time, that A. thaliana is a species that absorbs Si and that the incidence of powdery mildew disease for Si− fed plants is significantly lower compared to control plants. In particular, treatment with Si appeared to induce the production of an electron-dense, fungitoxic substance that accumulated within and around the collapsed fungal haustoria of infected epidermal cells within the leaves of disease-resistant plants. These results with Arabidopsis corroborate recent observations in other non-related species and support the emerging theory that the mechanisms by which Si imparts resistance to plants are complex and are not entirely explained by the traditionally proposed role of Si as a reinforcer of mechanical resistance. Collectively, the findings of the present study have established the Arabidopsis thaliana-Erysiphe cichoracearum pathosystem as a valid model to investigate the role of Si in plant–microbe interactions.     

Matrix assisted laser desorption ionization–time of flight (MALDI-TOF) mass spectrometry for identification of plant pathogenic Alternaria species

Identification of microorganisms by intact cell matrix-assisted laser desorption ionization–time-of-flight mass spectrometry (MALDI-TOF MS) is an emerging technology. In this work, intact MALDI-TOF MS was applied for rapid identification of plant pathogenic Alternaria species based on analysis of protein markers. An analysis of 60 isolates belonging to 12 Alternaria spp. showed characteristic protein finger prints that were specific at species level. When mass fragment data were subjected to partial least squares regression (PLS-R), all these 12 species formed separate groups. The method therefore permits rapid and direct identification of Alternaria spp. from small quantities of fungal mycelium.     

Spectral signatures in the UV range can be combined with secondary plant metabolites by deep learning to characterize barley–powdery mildew interaction

In recent studies, the potential of hyperspectral sensors for the analysis of plant–pathogen interactions was expanded to the ultraviolet range (UV; 200–380 nm) to monitor stress processes in plants. A hyperspectral imaging set-up was established to highlight the influence of early plant–pathogen interactions on secondary plant metabolites. In this study, the plant–pathogen interactions of three different barley lines inoculated with Blumeria graminis f. sp. hordei (Bgh, powdery mildew) were investigated. One susceptible genotype (cv. Ingrid, wild type) and two resistant genotypes (Pallas 01, Mla1- and Mla12-based resistance and Pallas 22, mlo5-based resistance) were used. During the first 5 days after inoculation (dai) the plant reflectance patterns were recorded and plant metabolites relevant in host–pathogen interactions were studied in parallel. Hyperspectral measurements in the UV range revealed that a differentiation between barley genotypes inoculated with Bgh is possible, and distinct reflectance patterns were recorded for each genotype. The extracted and analysed pigments and flavonoids correlated with the spectral data recorded. A classification of noninoculated and inoculated samples with deep learning revealed that a high performance can be achieved with self-attention networks. The subsequent feature importance identified wavelengths as the most important for the classification, and these were linked to pigments and flavonoids. Hyperspectral imaging in the UV range allows the characterization of different resistance reactions, can be linked to changes in secondary plant metabolites, and has the advantage of being a non-invasive method. It therefore enables a greater understanding of plant reactions to biotic stress, as well as resistance reactions.     

Defining and designing plant architectural ideotypes to control epidemics?

Ideotypes are a popular concept for plant breeders, who designate as such the ideal combinations of traits in a particular genotype to reach a pre-set production objective within a given socio-economic context. The historical, ‘genetic’ view of ideotypes has been more recently extended to cover the design of plant genotypes for specific cropping systems (the ‘agronomic’ view), or even the ideal combination of parameters, identified from formal or simulation modeling, to a specific agronomic problem (the ‘modelling’ view). These different forms of ideotypes in turn lead to different strategies for breeding plants. This paper will briefly describe, analyse and discuss some applications of these ideotype views, using the specific case of architectural traits of plant and crop canopies to limit the epidemic development of pests and diseases in crops. It is not intended to be an exhaustive and objective review of the existing literature on plant ideotypes, but rather to express as an ‘opinion’ paper the views discussed and elaborated among participants to the EpiArch network.     

Impacts of climate change on plant diseases—opinions and trends

There has been a remarkable scientific output on the topic of how climate change is likely to affect plant diseases. This overview addresses the need for review of this burgeoning literature by summarizing opinions of previous reviews and trends in recent studies on the impacts of climate change on plant health. Sudden Oak Death is used as an introductory case study: Californian forests could become even more susceptible to this emerging plant disease, if spring precipitations will be accompanied by warmer temperatures, although climate shifts may also affect the current synchronicity between host cambium activity and pathogen colonization rate. A summary of observed and predicted climate changes, as well as of direct effects of climate change on pathosystems, is provided. Prediction and management of climate change effects on plant health are complicated by indirect effects and the interactions with global change drivers. Uncertainty in models of plant disease development under climate change calls for a diversity of management strategies, from more participatory approaches to interdisciplinary science. Involvement of stakeholders and scientists from outside plant pathology shows the importance of trade-offs, for example in the land-sharing vs. sparing debate. Further research is needed on climate change and plant health in mountain, boreal, Mediterranean and tropical regions, with multiple climate change factors and scenarios (including our responses to it, e.g. the assisted migration of plants), in relation to endophytes, viruses and mycorrhiza, using long-term and large-scale datasets and considering various plant disease control methods.     

Phylogeny and evolution of plant pathogenic oomycetes—a global overview

Oomycetes have colonised all continents and oceans in a great variety of habitats and are arguably one of the most successful eukaryotic lineages. This is contrasted by the limited knowledge available for this group in various fields in comparison to other ubiquitous eukaryotes, such as unikont fungi, animals or plants. In this review an overview is given on the evolution and diversification of the oomycetes, with focus on the plant parasitic lineages and aspects of wild pathosystems.     

Are plant diseases too much ignored in the climate change debate?

Ignoring plant diseases misinforms the climate change and food security debate. Diseases are expected not only to cause more severe crop loss in many areas in the world and threaten food security, but also to decrease the climate change mitigation capacity of forests, of other natural ecosystems and of producing crops. However, if research, policy and industry join forces to obtain the multidisciplinary knowledge necessary to adapt integrated pest management (IPM) to the changing climate, it is expected that sufficiently resilient cropping systems can be developed in time. This was the main conclusion of the International Conference on Climate Change and Plant Disease Management held in Evora, Portugal, in November 2010.     

Special issue “Deepen knowledge in plant pathology for innovative agroecology”

This study aimed to determine the genetic variability of isolates of rotting of pineapple fruitlet core in Brazil on the states of Paraiba, Pernambuco and Rio Grande do Norte, based on phylogenetic analysis of the RPB2 gene, morphocultural markers and aggressiveness of the isolates. The phylogenetic reconstruction of maximum parsimony and bayesian inference of the isolates were performed. Twenty-seven phylogenetic lineages were characterized with morphocultural markers on potato dextrose agar and synthetic nutrient-poor agar. The aggressiveness of these lineages were characterized in leaves and fruits of pineapple ‘Pérola’ cultivar. The Phylogenetic reconstruction showed close relationship between isolates of this study and phylogenetic lineages of F. guttiforme, F. ananatum and F. oxysporum by analysis of RPB2 gene. Phylogenetic lineages of this study shared significant morphocultural markers similar to those described for this species. Overall, the lineages related with Fusarium oxysporum Species Complex were more aggressive to the fruits of the Fusarium lineages related with Fusarium fujikuroi Species Complex. It is possible that F. ananatum and F. guttiforme or other lineages closely related to these species or F. oxysporum are present in the fields causing pineapple rotting fruitlet core in fruits of pineapple ‘Pérola’ in Brazil. The used markers determined high genetic variability in isolates analyzed in leaves and pineapple fruit ‘Pérola’ in the states of Paraíba, Pernambuco and Rio Grande do Norte of Brazil and the pathogenic lineages analyzed were better adapted to the fruits than to the detached leaves in pineapple ‘Pérola’ analyzed.     

Do plant trichomes cause more harm than good to predatory insects?

Plants use trichomes as a morphological defense against attacks from herbivores. The literature was reviewed to test the hypothesis that trichome‐bearing (pubescent) plants do not cause more harm than good to predators. Forty seven records on interactions between plant trichomes and predatory insects were found. Overall, the records reveal that trichomes have more harmful than beneficial effects on predators. Fortunately, most harmful effects are sublethal; they usually affect movement, development, oviposition and predation potential. In worst cases, sticky exudates from glandular trichomes entrap predators. The hooked tips on non‐glandular trichomes impale predators. Entrapped and impaled predators often die from desiccation or starvation. Plant cultivars with high (rather than low) trichome density cause the most harm, and trichomes on tomato and some beans often cause more harm than good to predatory beetles, true bugs and lacewings. Whether these harmful effects have a net negative effect on plant fitness is poorly known and ripe for study. When developing and testing cultivars with increased trichome‐based resistance to herbivory, the question as to whether these technologies are compatible with the functional role of those predators (single or combined species) capable of suppressing herbivore populations should be considered. Published 2014. This article is a U.S. Government work and is in the public domain in the USA     

Quality assurance in plant health diagnostics – the experience of the Danish Plant Directorate

Worldwide, there is increasing focus on implementation of Quality Assurance systems (QA-systems) in plant health diagnostic laboratories. Several laboratories are in the development or implementation phase and some laboratories have gained accreditation through approval by national accreditation boards. To initiate the process of developing and implementing QA-systems, management and staff need a strong motivation factor. First, because it is a time-consuming and demanding process to go through. Second, because plant health testing does not fit very well into the QA-systems that traditionally were developed for chemical or physical testing laboratories. External pressure is often the only way to generate this motivation factor amongst staff and management to initiate the development of QA-systems. The principal motivation factor in our laboratory was a national requirement that official testing laboratories should implement QA-systems. At the Danish Plant Directorate (PD) we have gained experiences with accreditation of plant health diagnostic methods during the past 5 years. The focus of this paper is a presentation of the consequences and the practical approach to comply with the requirements of ISO 17025 in our plant health diagnostic laboratory. This includes the themes: staff competence and responsibilities, documentation and traceability, and continuous assessment and improvement of the QA-system.