Shell-shape variation along the latitudinal range of the Chilean blue mussel Mytilus chilensis (Hupe 1854)

Shell‐shape variation in the Chilean blue mussel Mytilus chilensis was examined in eight populations covering the totality of its distribution range, which represents over 1800 km of latitudinal gradient in the southeastern Pacific. The shell outline shapes were assessed using elliptic Fourier analysis followed by canonical variates analysis. Fourier coefficients showed a highly significant morphological variation between the populations studied. Canonical variates analysis showed a visual association of the First canonical with convexity of ventral edge and umbo shape, while the second axis was associated with shell elongation. Previously described genetic patterns were marginally congruent with our morphometric pattern, though geographic distance had a stronger effect on morphology. Shape change (elongation) was correlated with latitudinal clinal variation. The morphometrical analysis proved to be an important tool for evaluating the components of shell‐shape variation in mussels and to document association patterns with geographical and ecological variables. Such patterns are useful to establish a wide field of work, including sexing, stock recognition, traceability studies and productive management in general.     

Investigating patterns of straying and mixed stock exploitation of sea trout,Salmo trutta,in rivers sharing an estuary in south‐west England

For effective management, information on the stock composition of a fishery is essential. Here, the utility of a resident trout, Salmon trutta L, microsatellite baseline to determine the origins of sea trout entering the rivers Tamar, Tavy and Lynher in south‐west England is highlighted – all share a common estuary and have major runs of sea trout. There is a high degree of geographical structuring of the genetic variation in the baseline rivers. Testing with simulated and real data sets showed fish can be assigned to reporting group with a high degree of accuracy. Mixed stock analysis of >1000 sea trout showed that fish entering the Tamar and Tavy constituted mixed stocks. Significantly, in the Tamar, non‐natal origin sea trout are restricted to the lower catchment. As well as providing insight into sea trout behaviour, this study also has important implications for the management of recreational rod and line fisheries.     

Macro‐geographical differences influenced by family‐based expression on cultured pearl grade,shape and colour in the black‐lip ‘pearl oyster’ Pinctada margaritifera: a preliminary bi‐local case study in French Polynesia

In French Polynesia, the aquaculture of Pinctada margaritifera is carried out in numerous grow‐out sites, located over three archipelagos (Gambier, Society and Tuamotu). To evaluate the impact of macro‐geographical effects of these growing sites on pearl quality traits, five hatcheries produced families were used as homogeneous donor oysters in an experimental graft. The molluscs were then reared in two commercial locations: Tahaa Island (Society) and Rangiroa atoll (Tuamotu). At harvest, eight pearl quality traits were recorded and compared: surface defects, lustre, grade, circles, shape categories, darkness level, body and secondary colour and visual colour categories. Overall inter‐site comparison revealed that: (1) all traits were affected by grow‐out location except for lustre and round shape, and (2) a higher mean rate of valuable pearls was produced in Rangiroa. Indeed, for pearl grade, Rangiroa showed twice as many A‐B and less reject samples than Tahaa. This was related to the number of surface defects (grade component): in Rangiroa, twice as many pearls had no defects and less pearls had up to 10 defects. Concerning pearl shape, more circled and baroque pearls were found in Tahaa (+10%). For colour variation, 10% more pearls have an attractive green overtone in Rangiroa than in Tahaa, where more grey body colour were harvested. Lustre does not seem to be affected by these two culture site (except at a family scale). This is the first time P. margaritifera donor family have been shown to vary in the quality of pearls they produce depending on their grow‐out location.     

Evaluation of feed protein quality by measuring plasma free amino acids in Atlantic salmon (Salmo salar L.) after dorsal aorta cannulation

Two successive experiments were conducted in order to assess plasma free amino acid (FAA) profiles as a method for evaluating protein quality of fish feeds for Atlantic salmon, Salmo salar (L.). In experiment 1, the importance of meal size and inter‐fish variation was assessed by using dorsal aorta cannulated fish and diets that contained different sources of fishmeal (menhaden versus herring) which in the case of herring, had been dried at either 70 or 100 °C. In experiment 2, an attempt was made to mimic a production situation by comparing the FAA profiles in salmon fed diets containing two commercially available fishmeals that had been produced in accordance with industrial standards (Norse‐LT94® and NorSeaMink®; Norsildmel AL, Fyllingsdalen, Norway). FAA profiles in plasma 6 h after feeding were compared with feed true protein digestibility as determined in mink. Cannulated fish, held in individual tanks, were hand‐fed twice daily to pellet rejection (satiety) and daily records of the actual rations consumed were maintained. A total of 24 different amino acids and other amino‐containing compounds were detected using high‐pressure liquid chromatography. Morning and evening meal size showed significant correlations. Meal size had a significant effect on blood levels of the majority of essential free amino acids (EAA) as well as the total sum of FAA (TFAA). In experiment 1, a marked inter‐individual effect was found, possibly because of incipient sexual maturation. FAA profiles were therefore corrected for meal size by linear regression while repeated sampling via the permanently implanted cannula allowed paired comparisons of the different test diets, minimizing inter‐individual variation. Significant differences in plasma FAA profile, EAA and TFAA were detected between fish fed all diets in both experiments. The preceding parameters for fish ingesting each feed were directly related to their respective mink protein digestibility in experiment 1, but not in experiment 2. Our results show that dietary protein quality can be differentiated by the aforementioned protocol, and by using fish with a low metabolic rate feed qualities could be ranked correctly as in experiment 1.     

Scaling of body‐shape quality in reared gilthead seabream Sparus aurata L. Consumer preference assessment,wild standard and variability in reared phenotype

In this study, a scale of quality for the body shape of Gilthead seabream was developed. For this purpose, a questionnaire survey was carried out to study the preferences of consumers for the body shape of seabream. Furthermore, the variation in body shape in reared seabream was studied under two rearing environments (sea cages vs. tanks) and in comparison with wild‐caught individuals. Following the test–retest analysis of reliability, the 22 of 65 participants in the survey presented a significant correlation between repeated evaluations of the same subjects and were classified as responders of high discrimination efficiency or/and reliability (HDR). Geometric morphometric analysis on the evaluation of HDR responders revealed that compared with the fish of fair body shape, fish with preferred body shape were characterized mainly by a more proximal position of the base of the pelvic fins, the anterior base of the anal fin and the anterior dorsal fin. Of the 45 wild‐caught specimens examined, 26 presented a normal lateral line and no obvious skeletal deformities. The body shape of the normal wild‐caught fish was compared with the shape of reared seabream. Results showed that both the origin of fish (wild vs. reared) and the rearing methodology during the on‐growing phase significantly affected the body shape of seabream (P < 0.001). Compared with the reared fish, the wild‐caught fish were characterized mainly by a less prominent belly, slender trunk, smaller head, shorter caudal peduncle and a more posterior‐ventral position of the upper jaw.     

Age‐based demographic assessment of fished stocks of Lethrinus nebulosus in the Gascoyne Bioregion of Western Australia

Abstract Age‐based demographic analyses were undertaken to assess the current status of fished stocks of spangled emperor, Lethrinus nebulosus (Forsskål) in the Gascoyne Bioregion of Western Australia. Differences in age and growth characteristics were detected for samples collected from different assessment zones, with North Gascoyne fish observed to grow faster and reach a shorter average maximum length and younger average age than South Gascoyne fish. A significant difference in North Gascoyne catch‐at‐age data from different time periods demonstrated historical effects of fishing on population age structure. Instantaneous rates of fishing mortality (F) from catch‐curve analyses of age – frequency data sampled for the North Gascoyne stock from recreational fishing catches from April 2007 to March 2008 were beyond the limit reference point compared with estimated instantaneous rates of natural mortality (M) (i.e. F > 1.5M), indicating that there is currently a risk to the sustainability of that stock.     

Voluntary angler logbooks reveal long‐term changes in a lentic pike,Esox lucius,population

Sixty‐two years of voluntarily collected angling logbook data from a large natural Danish lake were used to study variation in pike, Esox lucius L., CPUE (catch per unit effort), expressed as no. of captured pike per boat trip, as an index of stock size. Pike CPUE was positively related to pike release rate by anglers and negatively affected by certain commercial fishers. The stocking of young‐of‐the‐year pike and a fishery‐dependent index of perch, Perca fluviatilis L., abundance (which may be pike prey or predator depending on size) did not correlate with pike CPUE. Analyses of the size distribution of pike, based on sizes of annual record trophy pike captured by anglers, confirmed the negative impact of commercial pike fishing and revealed a positive influence of air temperature. It is concluded that high‐quality angler logbooks that record effort and catch can be a cost‐effective tool to inform lake fisheries management by revealing long‐term population trends. Further, state space modelling, a statistical technique not yet seen in recreational fisheries science, is recommended as a tool to model proxies for population dynamics from angler logbook data.     

Body shape variation in two species of darters (Etheostoma,Percidae) and its relation to the environment

Environmental variation can shape phenotypic variation in organisms, but most evidence for trait differentiation comes from analyses of dichotomous habitat types that differ in only one or few key environmental factors. In reality, environmental variation is often more subtle, gradual and multifarious. Here, we investigated geographic variation in body shape of two darter species (Etheostoma spectabile and Etheostoma flabellare; Percidae) that occur along river gradients. This study addressed three specific questions: Is there intraspecific geographic variation in the two species across different sites in the Ozark Highlands of Oklahoma (USA)? Is phenotypic variation across sites correlated with abiotic environmental conditions? Do the two species share site‐specific (i.e. convergent) phenotypic variation in areas where they occur together? Our results indicated significant body shape variation in both species. Population differences in body shape were particularly correlated with variation in substrate composition. The combined analysis of both species indicated a small but significant effect of convergence on body shape wherever they are sympatric; shared variation, however, was not related to any environmental variables included in the analysis. While it remains unclear whether phenotypic variation in these species is due to heritable differentiation or environmentally induced plasticity, our results indicate that even subtle and gradual environmental variation can induce substantial variation in phenotypes on a relatively small spatial scale.     

Microsatellite DNA analysis and hydrodynamic modelling reveal the extent of larval transport and gene flow between management zones in an exploited marine fish (Glaucosoma hebraicum)

Determining the extent of dispersal in exploited marine fishes is essential for understanding their population dynamics and optimising management. The West Australian dhufish, Glaucosoma hebraicum, is a highly sought‐after, large and long‐lived reef‐dwelling species, endemic to south‐western Australia. Stock assessments indicate that this indicator species is overexploited. The fishery is managed using a zone‐based system, which implicitly assumes a high degree of demographic independence among zones. While tagging studies indicate limited movement of adult G. hebraicum, there is no understanding of the spatial scale of dispersal of its larvae and thus the true extent of interdependence of management zones. We analysed 13 microsatellite DNA loci to characterise the extent of gene flow, and conducted particle tracking simulations to model larval transport in this species. Genetic data demonstrated that some local recruitment was likely, but that on a broad scale gene flow between the management zones was extensive, and the entire fishery represents a single genetic stock. Hydrodynamic modelling predicted that the majority of dhufish larvae recruit from within the management zone where they are spawned, and that inter‐annual variation in current velocities has limited effect on the extent of larval transport. Because management zones are likely to be largely independent in terms of both larval and adult recruitment, heavy localised fishing pressure has the potential to reduce the abundance and reproductive capacity of this species in highly fished areas, but it should have limited impact on neutral genetic diversity.     

Genetic characterization of central Mediterranean stocks of the loggerhead turtle (Caretta caretta) using mitochondrial and nuclear markers,and conservation implications

1. In migratory species female‐ and male‐mediated gene flow are important for defining relevant Management Units, and for evaluating connectivity between these and their respective foraging grounds.
2. The stock composition at five Mediterranean foraging areas was investigated by analysing variation in the mitochondrial D‐loop and six microsatellite loci in a sample of 268 loggerhead turtles (Caretta caretta) stranded or accidentally caught by fisheries. This involved a comprehensive Mixed Stock Analysis which considers also recent data from major rookeries in Libya and Turkey, and the generation of a standardized nomenclature of allele sizes at the microsatellite loci.
3. The results indicate:
   • that the north Adriatic, the Tunisian continental shelf, the waters around Malta and the Italian Ionian Sea represent important areas for the conservation of rookeries in Greece, Libya and Turkey, respectively;
   • that waters off the Italian peninsula and the islands of Lampedusa and Malta are mainly inhabited by individuals of Mediterranean origin, with a major contribution from the nearest and largest colonies, while Atlantic turtles are restricted to the western areas;
   • that specific migratory routes exist from rookeries to foraging grounds;
   • a poor bi‐parental genetic structuring, which suggests a high male‐mediated gene flow in the Mediterranean;
   • mixing of small turtles in waters distant from natal rookeries, and recovery of structuring for large‐sized individuals; and
   • that uncommon mtDNA haplotypes are more powerful markers than microsatellite alleles in assessing an individual's origin, owing to their higher geographic specificity.

Copyright © 2013 John Wiley & Sons, Ltd.