Effect of dietary components on the gut microbiota of aquatic animals. A never‐ending story?

It is well known that healthy gut microbiota is essential to promote host health and well‐being. The intestinal microbiota of endothermic animals as well as fish are classified as autochthonous or indigenous, when they are able to colonize the host's epithelial surface or are associated with the microvilli, or as allochthonous or transient (associated with digesta or are present in the lumen). Furthermore, the gut microbiota of aquatic animals is more fluidic than that of terrestrial vertebrates and is highly sensitive to dietary changes. In fish, it is demonstrated that [a] dietary form (live feeds or pelleted diets), [b] dietary lipid (lipid levels, lipid sources and polyunsaturated fatty acids), [c] protein sources (soybean meal, krill meal and other meal products), [d] functional glycomic ingredients (chitin and cellulose), [e] nutraceuticals (probiotics, prebiotics, synbiotics and immunostimulants), [f] antibiotics, [g] dietary iron and [h] chromic oxide affect the gut microbiota. Furthermore, some information is available on bacterial colonization of the gut enterocyte surface as a result of dietary manipulation which indicates that changes in indigenous microbial populations may have repercussion on secondary host–microbe interactions. The effect of dietary components on the gut microbiota is important to investigate, as the gastrointestinal tract has been suggested as one of the major routes of infection in fish. Possible interactions between dietary components and the protective microbiota colonizing the digestive tract are discussed.     

Are hatchery‐reared abalone naïve of predators? Comparing the behaviours of wild and hatchery‐reared northern abalone,Haliotis kamtschatkana (Jonas, 1845)

Abalone populations have declined worldwide, generating interest in enhancement using hatchery‐reared individuals. In many cases, such restoration efforts have met with limited success due to high predator‐induced mortality rates. Furthermore, the mortality rates of outplanted hatchery abalone are often considerably higher than for wild individuals. This study uses northern abalone (Haliotis kamtschatkana) as a case study to determine whether hatchery‐reared abalone behave differently than their wild counterparts. In the field, outplanted hatchery‐reared abalone were significantly less responsive than wild abalone, in terms of number of abalone responding and intensity of response, to nearby movement and to physical contact with an inert probe. Also, when encountering a cue to which all abalone responded (a seastar predator), hatchery‐reared individuals remained subdued. Anti‐predator behavioural deficits in hatchery‐reared abalone were more pronounced in 4‐year‐old individuals than in 1‐year‐old individuals, suggesting an influence of either age or amount of time spent in the hatchery environment. These behavioural differences are expected to increase the vulnerability of hatchery‐reared abalone to predators, and are likely a major cause of their elevated predator‐induced mortality when outplanted.     

Testing for top‐down control: can post‐disturbance fisheries closures reverse algal dominance?

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Fisheries or aquaculture? Unravelling key determinants of livelihoods in the Brazilian semi‐arid region

In impoverished semi‐arid regions in the world, reservoirs serve multiple purposes, including food provision through fisheries and aquaculture. Yet, the socio‐economic benefits of promoting both activities remain unclear. We independently assessed the socio‐economic benefits generated from fisheries and aquaculture, in two reservoirs in the Brazilian semi‐arid region (June 2013 to June 2014). These reservoirs produced 27.75 ton of farmed tilapia over a year (USD Purchasing Power Parities [PPP] 88,778.73) and provided at least 16.5 ton of fish through fisheries (USD PPP 37,557.81), based on data from four farmer associations. Our input–output model revealed that the local economy depends on both activities, which, therefore, contribute similarly to providing goods and services to different branches. Aquaculture generated much higher revenues (seven times) than fisheries, but also much higher losses (the most successful farm yielded an average income of USD PPP 592.41 monthly). Still, there were no statistical differences in income among the compared associations. Fisheries provided very but guaranteed income (USD PPP 311.02 ± 82.94) and employed over three times as many people and contributed much more (>3 times) to food security than aquaculture. Encouraging aquaculture through specific policies while overlooking fisheries is not advisable because poor fishers would not be able to deal with unpredictable outcomes and it would put their food security at risk. However, if initial external support is provided to fishers in order to buffer large losses, aquaculture could represent a way out of poverty by generating an opportunity for larger gains, as long as potential negative ecological impacts of aquaculture are accounted for.     

Does ‘race to fish’ behaviour emerge in an individual transferable quota fishery when the total allowable catch becomes non‐binding?

Successful individual transferable quota (ITQ) management requires a binding (constraining) total allowable catch (TAC). A non‐binding TAC may result in a shift back towards open access conditions, where fishers increasingly compete (‘race’) to catch their share of the total harvest. This process was examined by comparing fishing fleet behaviour and profitability in the Tasmanian southern rock lobster (Jasus edwardsii) fishery (TSRLF), Australia. Between 2008 and 2010, the TSRLF had a non‐binding TAC and effectively reverted to a regulated, limited‐entry fishery. Fishers' uncertainty about future profitability and their ability to take their allocated catch weakened the security characteristic of the ITQ allocation. The low quota lease price contributed to an increase in fleet capacity, while the more limited reduction in quota asset value proved an investment barrier, hindering the autonomous adjustment of quota towards the most efficient fishers. In the TSRLF, catch rates vary more than beach price and are therefore more important for determining daily revenue (i.e., price x catch rate) than market price. Consequently, fishers concentrated effort during times of higher catch rates rather than high market demand. This increased rent dissipation as fishers engaged in competitive race to fish to be the first to exploit the stock and obtain higher catch rates. The history of this fishery emphasizes the need for a constraining TAC in all ITQ fisheries, not only for stock management, but also to manage the security of the ITQ allocation and prevent unanticipated and undesirable changes in fisher behaviour and fishery profitability.     

Is fisheries production within Large Marine Ecosystems determined by bottom‐up or top‐down forcing?

Understanding the mechanisms driving fisheries production is essential if we are to accurately predict changes under climate change and exploit fish stocks in a sustainable manner. Traditionally, studies have sought to distinguish between the two most prominent drivers, ‘bottom‐up’ (resource driven) and ‘top‐down’ (consumer driven); however, this dichotomy is increasingly proving to be artificial as the relative importance of each mechanism has been shown to vary through space and time. Nevertheless, the reason why one predominates over another within a region remains largely unknown. To address this gap in understanding, we identified the dominant driver of commercial landings within 47 ecosystems, encompassing a wide range of biogeochemical conditions and fishing practices to elucidate general patterns. We show that bottom‐up and top‐down effects vary consistently with past fishing pressure and oceanographic conditions; bottom‐up control predominates within productive, overfished regions and top‐down in relatively unproductive and under‐exploited areas. We attribute these findings to differences in the species composition and oceanographic properties of regions, together with variation in fishing practices and (indicative) management effectiveness. Collectively, our analyses suggest that despite the complexity of ecological systems, it is possible to elucidate a number of generalities. Such knowledge could be used to increase the parsimony of ecosystem models and to move a step forward in predicting how the global ocean, particularly fisheries productivity, will respond to climate change.     

Managing inequality or managing stocks? An ethnographic perspective on the governance of small‐scale fisheries

A growing volume of recent research on small‐scale fisheries governance has a focus on local perspectives and priorities of small‐scale fisherfolk. This paper develops from this local perspective a novel focus on what is a fundamental priority of many small‐scale fishers: concerns about inequality. The paper begins with a critical review of the literature on small‐scale fisheries governance and suggests how a focus on inequality can make a useful contribution. The paper uses case‐studies of small‐scale fisheries in Papua New Guinea (PNG) and the Philippines to highlight local priorities about inequality and the implications for small‐scale fisheries governance. PNG and the Philippines have very different social, political and environmental contexts, yet in both cases, local inequalities were a key pre‐occupation of fisherfolk and posed major challenges for fisheries governance. While in both of the case‐studies, fishers were aware of and keen to act on resource sustainability, this concern was overridden by concerns over: who obtained benefits from the fishery; who was responsible for resource degradation; and who should bear the costs of regulation. We conclude by discussing how our emphasis on the importance of inequality at a local level can potentially be integrated within many influential approaches to small‐scale fisheries governance.     

Are circle hooks an effective tool for conserving marine and freshwater recreational catch‐and‐release fisheries?

• 1. Circle hooks have rapidly become popular among recreational anglers, based largely on the assumption that their use aids in the conservation of fisheries resources by reducing gut hooking, and hence mortality. In addition, circle hooks are intended to facilitate jaw hooking. Unfortunately, these assumptions have been perpetuated by anecdotal reports with very little rigorous scientific information to support these assertions.
• 2. A number of recently published, forthcoming, and grey literature reports provide an opportunity to review briefly and synthesize research conducted on circle hooks. We surveyed literature databases and also used questionnaires to solicit information from unpublished or in‐progress circle hook research.
• 3. Although among studies the results have been quite disparate, overall the mortality rates were consistently lower for circle hooks than J‐style hooks. In addition, circle hooks were more frequently hooked in the jaw, and less frequently hooked in the gut than conventional hook types. There is no doubt that in some marine fisheries, such as tuna, billfish, and striped bass, capture efficiency remains high and injury and mortality rates are drastically reduced. However, in other species (e.g. bluegill), injury can actually be more severe from circle hooks relative to some other hook types. In other species, such as largemouth bass, circle hooks have minimal conservation benefit, but have reduced capture efficiency relative to conventional hook designs.
• 4. Factors such as hook size, fishing style, fish feeding mode, and mouth morphology all appear to affect the effectiveness of circle hooks. For these reasons, it is difficult to promote the adoption of the use of circle hooks as a panacea for all fish and fisheries. Instead, we recommend that management agencies focus on recommending circle hooks only for instances for which appropriate scientific data exist.
• 5. The recent interest in circle hooks has been beneficial for stimulating interest and research on the role of hook designs in reducing hooking‐related injury and mortality. We encourage tackle manufacturers to continue to develop new hook designs that have the potential to provide conservation benefit to caught and released fish. This paper provides direction to management agencies and outdoor media for disseminating responsible information to anglers regarding the application of circle hooks for conserving fisheries resources.

Copyright © 2004 John Wiley & Sons, Ltd.     

Can the presence of a large conspecific improve the production and welfare of groups of smaller self‐feeder competent rainbow trout?

This study examined the production and welfare effects of including a large self‐feeder competent rainbow trout, Oncorhynchus mykiss (Walbaum) (~665 g) in groups of smaller self‐feeder competent conspecifics (~234 g). Costs and benefits were examined for both welfare (aggression, fin damage, condition and mortality) and production (self‐feeder utilization and growth). The 8‐week experiment used six groups of small trout; three treatment groups containing a large trout and three control groups. After 4 weeks the large fish were removed from treatment groups and added to control groups, thus reversing the treatments. Whilst it was thought that the presence of a larger fish would suppress aggression in smaller conspecifics this did not occur. In fact aggression was significantly (P = 0.036) higher when large trout were present during the first 4 weeks. No significant differences were found between other welfare indicators, self‐feeder utilization or production parameters. From a production and welfare perspective these results suggest that with the exception of initially increasing aggression larger fish do not represent a significant benefit or risk to smaller conspecifics being cultured in self‐feeder equipped tanks, when all fish are self‐feeder competent.     

Is risk consistent across tier‐based harvest control rule management systems? A comparison of four case‐studies

There can be substantial differences in data quality and quantity among fished species. Consequently, the quality and type of assessments can also vary substantially. However, all species, especially those that are targeted, need to be managed. Several jurisdictions have developed hierarchical tier systems that categorize stocks based on, for example, the data available for assessment purposes and/or the extent to which quantities on which management advice is based can be estimated. Four case‐studies (Australia's Southern and Eastern Scalefish and Shark Fishery, the USA west coast groundfishery, the USA Alaskan crab fishery and EU fisheries) are used to contrast the types of hierarchical tier systems available, and to assess the extent to which each system constrains risk to be equivalent among the tiers (termed risk equivalency). Only the Australian system explicitly aims to achieve risk equivalency. However, this intent has not been fully operationalized. Our review reveals that best practice is not to define tiers simply on data availability, but also on what the assessments based on those data are capable of estimating. In addition, clearly differentiating the quantification of uncertainty from how decision‐makers wish to address that uncertainty would simplify justification of buffers (the gap between the assessment‐produced target catch or effort and the final management decision that accounts for uncertainty and risk). Risk equivalency can be achieved using management strategy evaluation to select the values for control variables, which determine the buffer given the uncertainty associated with the assessment.     

Do by‐catch reduction devices in longline fisheries reduce capture of sharks and rays? A global meta‐analysis

By‐catch in marine fisheries, particularly those using pelagic and demersal longlines, is a major driver of declines in abundance of sharks and rays around the world. A wide variety of by‐catch reduction devices (BRDs), that is, modified gears designed to reduce incidental captures of a variety of marine species while maintaining target catch rates, have been proposed, but the extent to which BRDs actually reduce the risk of catching sharks and rays remains unclear. We performed a meta‐analysis of 27 publications that reported the capture of sharks and rays and, in some cases, of targeted teleosts in longline gear deployed with and without BRDs. The risk of shark and ray capture differed between types of BRDs, but only one BRD type, longlines raised off the bottom, reduced by‐catch significantly. Circle hooks did not reduce the risk of capturing sharks and rays but might improve discard survival and are inexpensive, which might make them effective in reducing the detrimental effects of longlining on these species. In addition to being generally ineffective, some devices, such as electropositive and magnetic repellents, are expensive and have inherent construction drawbacks that are likely to make them unsuitable for commercial use. Overall, most BRDs did not affect the likelihood of catching targeted teleosts, but a substantial number of studies did not adequately assess target catch. We identified two poorly studied classes of BRD gear (i.e. raised demersal longlines, and monofilament nylon leaders), which represent promising directions for future research.     

Does marine fish farming affect local small‐scale fishery catches? A case study in the NW Mediterranean Sea

Fish farms have been shown to aggregate large numbers of wild fish in their surroundings. Although little is known about how this affects the local fishery, two hypotheses have been put forward; a trapping and a protecting effect on wild fish. This study provides the first monitoring of commercial and recreational fishing activity at a fish farm. We assessed the effect on the small‐scale fishery analysing the differences between fishing in farm proximity and away from the farm (in terms of catch rate, income and catch composition). Moreover, we estimated the biomass removal from fishing activities by farm employees inside the farm. The study was conducted from January 2011 to June 2012 at a Gilthead seabream farm in the NW Mediterranean. The findings revealed a relevant amount of commercial and recreational fishing effort in farm proximity. Yet, the results showed no benefit or difference of fishing in close proximity to the farm compared with areas away from the farm. Thus, we conclude that farm‐aggregated fish are protected from the commercial fleet by the farm leasehold area, but remain vulnerable to hidden fishing practices inside the farm, where farm employees harvest more than 4 t of wild fish annually.     

Bycatch susceptibility in pelagic longline fisheries: are albatrosses affected by the diving behaviour of medium‐sized petrels?

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Implementing ecosystem‐based management: evolution or revolution?

As a dominant paradigm, ecosystem‐based fisheries have to come to terms with uncertainty and complexity, an interdisciplinary visioning of management objectives, and putting humans back into the ecosystem. The goal of this article is to suggest that implementing ecosystem‐based management (EBM) has to be ‘revolutionary’ in the sense of going beyond conventional practices. It would require the use of multiple disciplines and multiple objectives, dealing with technically unresolvable management problems of complex adaptive systems and expanding scope from management to governance. Developing the governance toolbox would require expanding into new kinds of interaction unforeseen by the mid‐twentieth‐century fathers of fishery science – governance that may involve cooperative, multilevel management, partnerships, social learning and knowledge co‐production. In addition to incorporating relatively well‐known resilience, adaptive management and co‐management approaches, taking EBM to the next stage may include some of the following: conceptualizing EBM as a ‘wicked problem’; conceptualizing fisheries as social‐ecological systems; picking and choosing from an assortment of new governance approaches; and finding creative ways to handle complexity.     

The “tsunami break:” impact of the Great East Japan Earthquake and the accompanying tsunamis on the shell growth of the invasive clam-eating snail <Emphasis Type="Italic">Laguncula pulchella</Emphasis>

The Great East Japan Earthquake and accompanying tsunamis occurred on 11 March 2011, causing huge damage to marine organisms. The invasive naticid gastropod Laguncula pulchella (Euspira fortunei), which was introduced with the imported clam Ruditapes philippinarum from China and Korea, survived the earthquake. The “growth break line” observed on the shell surface in over 90% of the individuals collected in Matsushima Bay and Matsukawa-ura Lagoon after the tsunamis was examined by scanning electron microscopy. Each shell presented three layers before and three after the growth break. However, the fracture surface consisted of five layers—two prismatic and three crossed lamellar—around the growth break line. This suggests that shell formation temporarily ceased following the tsunamis and that the five-layered shell may have developed in response to the stress caused by the tsunamis. The newly formed middle layer became thinner after the “tsunami break,” which may be the result of a rapid change in the mineralization process, including rapid shell growth and/or repair. These results suggest that the damage to and forcible removal of habitats by the tsunamis was stressful for L. pulchella. A decrease in or the cessation of shell formation after a tsunami may be a common phenomenon in mollusks that inhabit tidal flats.     

Does the capacity for energy utilization affect the survival of post‐smolt Atlantic salmon,Salmo salar L., during natural outbreaks of infectious pancreatic necrosis?

If osmotic stress and reduced seawater tolerance are predisposing factors for infectious pancreatic necrosis (IPN) outbreaks in farmed Atlantic salmon, increased survival by enhancing access to energy would be expected. The aim of the present study was, therefore, to increase energy access in 1-year old Atlantic salmon after sea transfer by increasing the level of dietary fat, by exchanging some of the dietary oil with more easily oxidized medium chain triacylglycerols, or by dietary supplementation of potentially energy enhancing additives such as clofibrate and tetradecylthioacetic acid (TTA). A natural outbreak of IPN occurred 8 weeks after sea transfer, and a significant dietary effect explaining 76% of the variation in mortality was observed. Relative percentage survival for the fish fed TTA in sea water was 70% when compared with the unsupplemented control, reducing mortality from 7.8 to 2.3%. Muscle fat content and plasma chloride were related to IPN mortality, suggesting that reduced hypoosmoregulatory capacity might be a predisposing factor to the onset of an IPN outbreak. Based on the observation of a threefold increase in white muscle mitochondrial fatty acid oxidizing activity by TTA, it is suggested that TTA has resulted in a re-allocation of dietary fatty acids from storage to energy producing oxidation.     

The presence and expression of the HIF-1α in the respiratory intestine of the bronze Corydoras <Emphasis Type="Italic">Corydoras aeneus</Emphasis> (Callichthyidae Teleostei)

Bronze corydoras (Corydoras aeneus) is a small diurnal activity fish from South America. Under hypoxia conditions, it uses the posterior part of the intestine as an accessory respiratory organ. The present PCR studies demonstrated higher expression of HIF-1α (hypoxia-inducible factor) gene in the respiratory than that in digestive part of bronze corydoras intestine. Further, immunolocalization studies using antibodies specific to HIF-1α and transmission electron microscopy (TEM) revealed the presence of HIF-1α epitopes in the intestine of Corydoras aeneus. In the respiratory intestine, the numerous clusters of gold particles visualizing HIF-1α antibody were observed within fibroblasts, whereas in the digestive tract of this species, single gold grains in the epithelial cells were noted. On the other hand, the presence of HIF-1α and the cytoplasmic domain of the epidermal growth factor receptor (EGFR) in the respiratory intestine of bronze corydoras assumes their interactions in the system where these factors appeared for the first time. The non-obligatory air-breathing fishes using their digestive tract as an accessory respiratory organ during hypoxia conditions are very interesting for the studies of the processes that control HIF-1α expression and squamous cell proliferation.     

Are Acartia tonsa cold‐stored eggs a suitable food source for the marine ornamental species Amphiprion polymnus? A feeding study

Copepods are the natural food items for marine fish larvae but are still difficult to be cultured on a continuous basis. Therefore, suitable storage techniques for copepod subitaneous eggs are of great interest. Cold‐stored copepod embryos still develop and retain a physiological activity during the cold storage period. As a consequence, their nutritional quality may change over the time of storage with these changes possibly affecting both eggs viability and larval fish survival and development. In this study, the clownfish, Amphiprion polymnus, was used as an experimental model to compare, for the first time, the effects of diets based on enriched rotifers and Artemia (control), Acartia tonsa copepods of a continuous culture and A. tonsa originated from 6 months cold‐stored eggs. The effects of the different diets were tested through morphometric, molecular and biochemical approach. This study demonstrated that after a 6 months cold storage period, the quality of copepods obtained from those eggs was suboptimal for A. polymnus larval rearing. In fact, larvae fed those copepods showed lower growth and survival performances respect to the other experimental groups.