Land cover,riparian zones and instream habitat influence stream fish assemblages in the eastern Amazon

The Amazon rainforest has experienced rapid land‐use changes over the last few decades, including extensive deforestation that can affect riparian habitats and streams. The aim of this study was to assess responses of stream fish assemblages to deforestation and land cover change in the eastern Amazon. We expected that percentage of forest in the catchment is correlated with local habitat complexity, which in turn determines fish assemblage composition and structure. We sampled 71 streams in areas with different land uses and tested for relationships between stream fish assemblages and local habitat and landscape variables while controlling for the effect of intersite distance. Fish assemblage composition and structure were correlated with forest coverage, but local habitat variables explained more of the variation in both assemblage composition and structure than landscape variables. Intersite distance contributed to variance explained by local habitat and landscape variables, and the percentage of variance explained by the unique contribution of local habitat was approximately equivalent to the shared variance explained by all three factors in the model. In these streams of the eastern Amazon, fish assemblages were most strongly influenced by features of instream and riparian habitats, yet indirect effects of deforestation on fish assemblage composition and structure were observed even though intact riparian zones were present at most sites. Long‐term monitoring of the hydrographic basin, instream habitat and aquatic fauna is needed to test for potential legacy effects and time lags, as well as assess species responses to continuing deforestation and land‐use changes in the Amazon.     

A review of existing fish assemblage indicators and methodologies

Abstract  Fish assemblage indicators developed throughout the world were reviewed and key differences in methodologies depending on ecoregions, basins and contrasting fish fauna summarised. Common elements of existing Indices of Integrity were identified to support the development of a European-wide fish index. These include, using reference condition, accounting for natural fish assemblage variability, evaluating metric precision and selecting the most sensitive and complementary metrics. For future developments, it was recommended to pay more attention to temporal variability in fish assemblages, age structure of key (sentinel) species and fish migration. Testing hypotheses at different steps of the process seems to be the appropriate way to design fish indices.     

Evaluation of canola oils as alternative lipid resources in diets for juvenile red seabream, Pagrus auratus

This study examined three potential oil resources, crude and refined canola oil and refined soybean oil as replacements for added dietary fish oil in diets for juvenile red seabream. These oil resources were evaluated for their potential to replace added fish oil (40 g kg^?1) in fishmeal based (600 g kg^?1) diets, with 100 g kg^?1 of total lipids. Each of the three plant oils was used to replace 25%, 50%, 75% or 100% of the added dietary fish oil. Each of the three plant oils showed potential as a replacement for dietary fish oil, although a significant reduction in growth and feed utilisation was observed with the complete (100%) replacement of added fish oil by crude canola oil. No other significant effects of oil type or inclusion level on growth were apparent. A negative control (no added fish oil or plant oil, 60 g kg^?1 of total lipid) yielded poorer growth than all treatments except the diet containing 40 g kg^?1 of added crude canola oil (100% replacement). This observation confirmed that the added oils were utilized by the fish. A positive control diet containing 80 g kg^?1 of added fish oil (140 g kg^?1 total dietary lipid) sustained the best growth in the study, confirming that the 13 experimental diets were energy limiting as planned. Notably, few effects of the alternative oils were seen on the proximate composition of the fish. However, the influence of the alternative oils on the tissue fatty acid composition was considerable, irrespective of plant oil type or processing grade. Particularly notable was the overall increase in the level of polyunsaturated fatty acids in the tissues of the fish fed the plant oil diets, with these trends becoming more apparent with the greater levels of fish oil replacement. Minimal reductions in the levels of the long‐chain polyunsaturated fatty acids of eicosapentaenoic (20:5n‐3) and docosahexaenoic (22:6n‐3) acid were observed from any of the plant oil treatments. Sensory assessment, by an Australian taste panel, of the fish fed the fish oil reference, or the 100% replacement by refined canola or refined soybean diets showed a preference in order of canola oil > soybean oil > fish oil fed fish. Clearly, both canola and soybean oils have considerable potential as replacements of fish oils in diets for this species.     

Dams in the Amazon: The importance of maintaining free-flowing tributaries for fish reproduction

1. Free-flowing tributaries are important for the maintenance of fish diversity in dammed systems. In relation to the reproduction of fish species, the role of a free-flowing tributary was evaluated and compared with that of a dammed tributary downstream of large dams in the Madeira River, one of the main tributaries of the Amazon River.
2. Two hypotheses were tested: (i) the densities of the ichthyoplankton differ between the dammed and the free-flowing tributaries; and (ii) the free-flowing tributary contributes a greater diversity of fish larvae species to the assemblage structure of the main stem than the dammed tributary.
3. Fish eggs and larvae were sampled at five sites: one in each tributary (Jamari – dammed – and Machado – free-flowing) and three in the main stem (Madeira River), upstream and downstream from the mouth of each tributary.
4. Fitted Bayesian models showed that the densities both of eggs and larvae were more than twice as high in the free-flowing tributary than in the dammed tributary. The results also indicated that the free-flowing tributary makes a major contribution to the fish assemblage structure of the Madeira River, whereas the dammed tributary does not have a significant influence on the main stem assemblage structure.
5. The results demonstrate the importance of conservation and maintenance not only of the Machado River but also of other free-flowing tributaries in dammed basins, especially those basins with high biodiversity, such as the Amazon. Moreover, this study helps inform the decision-making process regarding the location of new dams, which is critical in fish diversity conservation.

     

Factors affecting fish assemblage structure during seasonal stream drying

Abstract –  We evaluated fish assemblage structure during stream drying in north west Arkansas in 2002 and 2003. We sampled fish with a seine and backpack electrofisher and measured habitat variables along transects. Linear regression models were selected a priori and ranked according to Akaike's Information Criterion. In 2002, total fish density was negatively related to pool area and maximum depth, and positively related to canopy openness and substrate diversity. Similarly, central stoneroller ( Campostoma anomalum , Rafinesque) and creek chub ( Semotilus atromaculatus , Mitchill) densities were negatively related to maximum pool depth. In 2003, fish species richness was positively related to pool area whereas total fish, central stoneroller, and creek chub densities were negatively related to maximum pool depth. In addition, total fish density was negatively related to substrate diversity. Results indicated that physical factors are important predictors of fish assemblage structure during stream drying. However, differences among response variables between years indicated that the magnitude of stream drying might be critical in intermittent streams.     

The importance of live‐feed traps – farming marine fish species

This article analyses the challenges of different live‐feed regimes for the rearing of marine finfish larvae and discusses the potential alternative live feeds to avert a future live‐feed trap. Live feeds are indispensable for the successful rearing of larvae of most marine fish species. Brine shrimps (Artemia) and rotifers comprise the live feeds of choice in marine aquaculture today. However, their nutritional composition is deficient in especially essential fatty acids, and enrichment with fish oil is needed. Fish oil is considered a limited resource owing to its origin in fully exploited wild fish stocks. Moreover, fluctuations of the natural population of Artemia will, most likely, influence future availability and prices. This emphasizes the need for optimal exploitation of available live‐feed resources and development of new sustainable alternatives, such as copepods. An array of solutions to these problems are presented to avoid a future live‐feed trap and to reduce dependence on limited resources that influence future production possibilities, species diversification, price volatility and productivity in the aquaculture sector.     

The influence of bottom type and shelf position on biodiversity of tropical fish inside a recently enlarged marine reserve

• 1. A necessary component of implementing a successful marine reserve is the quantification of the biological resources that fall under its protection. Without such an initial assessment, the future effects of the reserve on the local habitat and biotic community cannot be quantified and will remain the subject of debate.
• 2. This study provides such a baseline assessment of fish diversity and habitat types within a recently enlarged marine reserve. Buck Island Reef National Monument, US Virgin Islands, was recently enlarged from approximately 4 km² to over 76 km². Areas of sand, seagrass, and hard‐bottom under protection were increased from 0.29 km², 0.47 km², and 1.96 km² to 2.70 km², 2.89 km², and 18.30 km² respectively when the Monument was expanded. A 53 km² area of pelagic/deep‐water habitat with unknown bottom type is now also protected by the Monument.
• 3. Visual counts of fish within 25×4 m² transects conducted during the day were used to assess fish community structure and habitat utilization patterns. Species richness, diversity, assemblage structure, and fish density were evaluated and compared among sand, seagrass, and hard‐bottom habitats. Hard‐bottom sites had over twice the mean species richness and diversity as sand and seagrass sites, and several times greater mean fish density.
• 4. Quantification of the fish community in pelagic and deep‐water habitats within the reserve is recommended to provide a more comprehensive assessment of the offshore areas of the reserve. Fish numbers, size, and diversity outside the reserve boundaries must also be evaluated to allow quantification of the effects of the marine reserve on the adjacent fish communities.

Copyright © 2004 John Wiley & Sons, Ltd.     

Effects of small hydropower plants on fish assemblages in medium‐sized streams in central and northern Portugal

• 1. Over the last decade the development of small hydropower projects has been one of the most active areas of the energy sector. One of the main environmental challenges faced by such projects is related to fish passage.
• 2. The impact of 18 small hydropower plants (SHPs) with distinct levels of fish‐pass effectiveness was investigated in the summers of 1998 and 1999 by comparing fish assemblage composition and structure at 36 sites, above and below SHPs.
• 3. With regard to effectiveness, it was estimated that eight (44.4%) of the surveyed passage facilities were suitable for target species, whereas the remaining 10 (55.6%) were considered unsuitable. In neither case did the composition of fish assemblages upstream and downstream from SHPs differ significantly, while assemblage similarity was relatively high.
• 4. Multivariate techniques identified cover, depth and coarse substrate as the main parameters structuring fish assemblages. It is suggested that these variables have created a rich, patchy, heterogeneous habitat, thereby providing satisfactory resources and favourable conditions required by fish and contributing to the maintenance of assemblages.
• 5. Although populations of some species that occurred both upstream and downstream from SHPs have developed differences in their size structures, SHP‐induced fragmentation of fish populations may not necessarily result in genetic divergence among semi‐isolated populations.

Copyright © 2006 John Wiley & Sons, Ltd.     

Evaluating habitat associations of a fish assemblage at multiple spatial scales in a minimally disturbed stream using low‐cost remote sensing

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春秋季台州湾海域鱼类资源的时空分布特征研究

为研究浙江近岸河口海域鱼类资源分布的时空变化特征,利用2010年4月(春季)和10月(秋季)鱼山渔场台州湾海域底拖网游泳动物资源调查资料,分析了台州湾鱼类资源量的时空分布特征和优势种、温度、盐度、水深等因素对鱼类资源量和分布的影响。结果发现,鱼类尾数密度和质量密度变化趋势一致,秋季鱼类质量密度和尾数密度均远远高于春季;春季调查海域鱼类密度北部高于南部,秋季截然相反。回归分析显示,两季优势种对鱼类资源量变化均有密切关系,其中,龙头鱼对鱼类资源量的贡献率明显高于其他物种,两季均为第一优势种。调查海域底层温度与鱼类质量密度和尾数密度均呈显著的正相关关系(PW=0.001,PN=0.009),水深与资源量相关关系不显著(Pw=0.067,PN=0.051),春季20 m以内水深鱼类资源量较高,而秋季密度高值区水深均大于20 m。研究表明,台州湾海域春秋季鱼类资源密度季节变化明显,空间差异显著,底层水温是主要影响因素。     

Fish assemblage production estimates in Appalachian streams across a latitudinal and temperature gradient

Production of biomass is central to the ecology and sustainability of fish assemblages. The goal of this study was to empirically estimate and compare fish assemblage production, production‐to‐biomass (P/B) ratios and species composition for 25 second‐ to third‐order streams spanning the Appalachian Mountains (from Vermont to North Carolina) that vary in their temperature regimes. Fish assemblage production estimates ranged from 0.15 to 6.79 g m^?2 year^?1, and P/B ratios ranged from 0.20 to 1.07. There were no significant differences in mean assemblage production across northern cold‐water, southern cold‐water and southern cool‐water streams (p = .35). Two warm‐water streams, not included in these comparisons, had the highest mean production and biomass values. Mean assemblage P/B was significantly higher in northern cold‐water streams relative to southern cold‐water and cool‐water streams (p = .01). Species evenness in production declined with stream temperature and differed significantly across the lower latitude cold‐water, cool‐water and warm‐water streams and the higher latitude (i.e. more northern) cold‐water streams. Our fish assemblage production estimates and P/B ratios were both lower and higher compared to previously published estimates for similar stream habitats. This study provides empirical fish assemblage production estimates to inform future research on southern Appalachian streams and on the potential impacts of varying temperature regimes on cold‐water, cool‐water and warm‐water fish production in the coming decades as climate change continues to threaten fish assemblages.     

黄海南部近岸海域鱼类群落结构与区系划分

黄海南部海域具有复杂的水团结构和海流环境,使该海域鱼类群落产生较为复杂的空间结构。为研究黄海南部近岸海域鱼类群落结构特征,实验根据2014—2015年对该海域进行4个季度的底拖网调查数据,利用多元统计方法分析了该海域鱼类群落的分布格局并比较了各群落的相对生物量、生物多样性、优势种等结构特征。应用聚类分析(cluster)和多维标度排序(MDS)分析将黄海南部近岸海域划分为海州湾群落与江苏近岸群落;海州湾群落的平均相对资源量和生物多样性均高于江苏近岸群落,而暖温性与暖水性鱼类所占比重相对较低;海州湾群落的优势种主要为方氏云鳚、大泷六线鱼和日本鳀等,季节变化显著;江苏近岸群落的优势种为短吻红舌鳎、途、棘头梅童鱼和黑鳃梅童鱼等,季节变化不明显。研究表明,黄海南部近岸海域可划分为海州湾区系与江苏近岸区系,其鱼类群落结构特征具有显著差异。海流、水团、底质类型及水深等环境因子是形成鱼类群落结构差异的主要因素。     

春季和夏季杭州湾北部海域鱼类种群结构分析

为了解杭州湾北部海域鱼类种群组成及结构特点,利用相对重要性指数(IRI)、Cluster聚类和多元统计等方法对该海域鱼类种群结构进行分析。结果显示,春、夏季杭州湾北部海域共出现鱼类22种,隶属8目、12科、19属,鲈形目占比最高,为50.0%,其次为鲽形目和鲱形目,所占比例各为13.6%,生态类型以海洋性鱼类为主。调查共发现6种鱼类优势种,春季优势种为棘头梅童鱼(Collichthys lucidus)、鮸(Miichthys miiuy)和凤鲚(Coilia mystus),夏季优势种为棘头梅童鱼、白姑鱼(Pennahia argentata)、龙头鱼(Harpodon nehereus)、鮸和焦氏舌鰨(Cynoglossus joyneri)。Cluster聚类和非度量多维标度显示,杭州湾北部海域鱼类种群可分为春季组(Ⅰ组)和夏季组(Ⅱ组),春季组由5月站点组成,夏季组由8月站点组成,组间差异系数达到84.17%。ANOSIM分析表明,春季组和夏季组种群结构差异极显著(R=0.554,P0.01);BIOENV分析表明,春、夏季杭州湾北部鱼类种群结构与温度的相关性最高,相关系数为0.404。研究表明,杭州湾海域仍然是棘头梅童鱼、凤鲚等经济鱼类的产卵场和索饵场,鱼类种群结构的季节变化明显,棘头梅童鱼的生态洄游习性可能是造成种群结构变化的主要原因。     

High and dry in days gone by: Life-history theory predicts Appalachian mountain stream fish assemblage transformation during historical drought

Understanding the ecological dimensions of drought is critical for predicting how humans and nature will be affected by the expected increased prevalence of drought in the future. We tested life-history-based predictions for fish assemblage responses to drought using retrospective analysis of long-term (1986–2003) fish surveys from two streams in the Appalachian Mountains of North America. We hypothesised that (1) fish assemblage composition would correlate with wet and dry hydrologic conditions as assemblages fluctuated within a loose equilibrium and (2) life-history traits of fishes would correlate with dry versus wet periods such that opportunistic life-history strategists would dominate during drought. Results showed fish assemblage changes in Little River and Cataloochee Creek correlated with drought severity measured one year prior to fish surveys. Fish assemblages at all three sampling sites in Little River and two sites in Cataloochee Creek fluctuated within a loose equilibrium, while the remaining two sites in Cataloochee Creek indicated directional change. Life-history traits for fishes in Cataloochee Creek correlated with one-year time lag fluctuations in drought caused by opportunistic species being dominant during drought and periodic/equilibrium species dominant during wet periods. Time series plots of fish abundances aggregated by life-history strategy revealed dominance of opportunistic species emerged at the onset of a multi-year drought spanning 1998–2004, particularly for the two sites undergoing directional change. Our work provides empirical evidence for theoretical linkages between life history and environmental fluctuations and can ultimately be used to predict stream fish community response to future drought regimes.     

Coastal development threatens Datan area supporting greatest fish diversity at Taoyuan Algal Reef,northwestern Taiwan

1. Taoyuan Algal Reef is a biodiverse coralline algal reef in north-west Taiwan, that is currently threatened by coastal development and industrial waste runoff.
2. As the reef lies in an exposed area that is frequently disturbed by monsoons, it is difficult to survey using traditional methods. Knowledge of the reef is therefore limited, and has until recently, long been regarded as a barren environment.
3. However, recent studies have revealed that the reef is inhabited by a diverse array of organisms, particularly at Datan, where a natural gas receiving terminal is planned for construction. Due to challenging environmental conditions, otolith assemblage and soundscape analyses were used to supplement traditional sampling methods including clove oil, netting, and pole-and-line fishing in order to assess the diversity of the fish community at Taoyuan Algal Reef.
4. Several fish species that had not been recorded by previous surveys were observed. Fish diversity and the average size of commercially targeted species were greatest at Datan G2. Predatory reef fishes such as groupers (Serranidae) and snappers (Lutjanidae), as well as several small endangered scalloped hammerhead sharks Sphyrna lewini were recorded at G2, where otolith assemblage analysis also indicated increased predatory activity. However, fewer individuals and species were recorded from tidal pools across all sites compared to previous surveys, suggesting a loss of biodiversity.
5. If construction work resumes at Datan, it will be likely to have adverse consequences for the reef itself, the species that inhabit it, and by extension, the local fishermen that rely upon it. Halting additional coastal development, reducing industrial and domestic pollution, as well as improving the management of traditional fisheries is recommended to protect this unique reef ecosystem from further degradation.

     

Isotopic trophic guild structure of a diverse subtropical South American fish community

Characterization of food web structure may provide key insights into ecological function, community or population dynamics and evolutionary forces in aquatic ecosystems. We measured stable isotope ratios of 23 fish species from the Rio Cuareim, a fifth‐order tributary of the Rio Uruguay basin, a major drainage of subtropical South America. Our goals were to (i) describe the food web structure, (ii) compare trophic segregation at trophic guild and taxonomic scales and (iii) estimate the relative importance of basal resources supporting fish biomass. Although community‐level isotopic overlap was high, trophic guilds and taxonomic groups can be clearly differentiated using stable isotope ratios. Omnivore and herbivore guilds display a broader δ¹³C range than insectivore or piscivore guilds. The food chain consists of approximately three trophic levels, and most fishes are supported by algal carbon. Understanding food web structure may be important for future conservation programs in subtropical river systems by identifying top predators, taxa that may occupy unique trophic roles and taxa that directly engage basal resources.     

Relationship between fish assemblage and angler catch in the Sulejów Reservoir,central Poland,in the context of a warming climate

The Pilica River has warmed at a rate of 0.06°C per year since 1969, threatening the ecological services provided by the Sulejów Reservoir. Gillnet sampling revealed that the reservoir is inhabited by a cyprinid‐dominated fish assemblage with roach, Rutilus rutilus (L.) (42% of the total biomass), the dominant species. However, the interest of the anglers was primarily focused on common bream, Abramis brama (L.) (almost 65% of the catch), as revealed by the catch statistics (2004–2014). No direct evidence was found that the temperature increase had an influence on the recreational fishery or fish assemblage structure. On the other hand, changes in the fish assemblage that were reflected in angler catch composition were observed. A decrease in the catch of common bream in gillnets was accompanied by a shift in angler choices towards roach and other fish species. The sustainability of recreational fisheries is more likely to be influenced by changes in the economic status of society, water quality (toxic cyanobacteria blooms) and water management practices in Poland. The question arises about which species will dominate in the impoundment in the future if the warming trend continues and common carp, Cyprinus carpio L., stocking is maintained.     

The status of host fish populations and fish species richness in European freshwater pearl mussel (Margaritifera margaritifera) streams

• 1. The status of host fish populations and fish species richness was investigated at 36 sites of 20 extant freshwater pearl mussel populations, including the drainages of the Elbe, Danube, Rhine, Weser, Aulne, Kemijoki and Tuuloma in Germany, the Czech Republic, France and Finland, by carrying out comparative electrofishings.
• 2. Brown trout (Salmo trutta f. fario) were found to be the available host fish for pearl mussels in all except one of the streams investigated with mean densities of 2861 ha^?1 (range 0–8710 ha^?1) and a mean biomass of 119 kg ha^?1 (range 0–478 kg ha^?1). Streams that had been frequently stocked with brown trout had higher trout biomass and densities of host fish than natural populations, but trout stocking had no positive effect in two of the streams investigated.
• 3. Fish species richness ranged from 2 to 16 species per stream and showed a negative correlation with host fish biomass and host fish densities. Undisturbed oligotrophic pearl mussel headwater streams usually only yielded a low number of fish species. Habitat degradation can reduce competitiveness of specialized trout and result in an increased abundance of ubiquitous or atypical species.
• 4. A link between the lack of juvenile pearl mussels and a lack of suitable host fish was only rarely observed. Functional pearl mussel populations with relatively high numbers of juveniles had significantly lower densities and biomass of host fish than pearl mussel populations without recent recruitment.
• 5. This study suggests that 0+ host fish are not necessarily required to sustain functional pearl mussel populations. Low densities of host fish can be compensated by the higher glochidia carrying capacity of older host fish with limited previous contact with pearl mussel glochidia, by the long reproductive period of mussels, and by low mortality rates of juvenile mussels during their post‐parasitic phase.

Copyright © 2005 John Wiley & Sons, Ltd.     

Geographic, terrestrial and aquatic factors: which most influence the structure of stream fish assemblages in the midwestern United States?

Abstract – Effects of environmental or landscape factors on species composition, species richness and complexity of fish assemblages were examined using our collections of fish from 65 sites on streams in 13 drainages across the midwestern United States. Effects of environmental factors were examined at three scales: broad geographic factors included drainage, latitude, and longitude; local terrestrial factors included features of the riparian zone adjacent to the collecting site as well as local climate and land use; within-stream aquatic factors related to structure and hydrology of the stream reach sampled. Each assemblage property was examined for its relationship to factors at each scale separately, and then for relative importance of all factors found to be significant in the separate analyses. Assemblage composition (summarized as sample scores on two axes of a detrended correspondence analysis) varied significantly as a function of factors at all three scales when each scale was considered separately. With simultaneous consideration of all scales, however, only broad geographic factors (particularly latitude) and local terrestrial factors explained significant variation in assemblage composition. Species richness (the number of species we captured) was explained by longitude and within-stream aquatic factors both when considered separately and together. Assemblage complexity (quantified as slope of relative abundance versus rank abundance) was only related to within-stream aquatic factors. Assemblage composition and emergent assemblage properties (richness and complexity), therefore, were explained by factors acting at different scales. The total variation explained for assemblage composition was much greater than that explained for emergent assemblage properties, suggesting that assemblage composition may vary more as a function of environmental and landscape factors than do species richness and complexity. ^NOTE     

Large‐scale patterns of fish diversity and assemblage structure in the longest tropical river in Asia

Although the Mekong River is one of the world's 35 biodiversity hot spots, the large‐scale patterns of fish diversity and assemblage structure remain poorly addressed. This study aimed to investigate the fish distribution patterns in the Lower Mekong River (LMR) and to identify their environmental determinants. Daily fish catch data (i.e. from December 2000 to November 2001) at 38 sites distributed along the LMR were related to 15 physicochemical and 19 climatic variables. As a result, four different clusters were defined according to the similarity in assemblage composition and 80 indicator species were identified. While fish species richness was highest in the Mekong delta and lowest in the upper part of the LMR, the diversity index was highest in the middle part of the LMR and lowest in the delta. We found that fish assemblages changed along the environmental gradients and that the main drivers affecting the fish assemblage structure were the seasonal variation of temperature, precipitation, dissolved oxygen, pH and total phosphorus. Specifically, upstream assemblages were characterised by cyprinids and Pangasius catfish, well suited to low temperature, high dissolved oxygen and high pH. Fish assemblages in the delta were dominated by perch‐like fish and clupeids, more tolerant to high temperatures, and high levels of nutrients (nitrates and total phosphorus) and salinity. Overall, the patterns were consistent between seasons. Our study contributes to establishing the first holistic fish community study in the LMR.