Shell-shape variation along the latitudinal range of the Chilean blue mussel Mytilus chilensis (Hupe 1854)

Shell‐shape variation in the Chilean blue mussel Mytilus chilensis was examined in eight populations covering the totality of its distribution range, which represents over 1800 km of latitudinal gradient in the southeastern Pacific. The shell outline shapes were assessed using elliptic Fourier analysis followed by canonical variates analysis. Fourier coefficients showed a highly significant morphological variation between the populations studied. Canonical variates analysis showed a visual association of the First canonical with convexity of ventral edge and umbo shape, while the second axis was associated with shell elongation. Previously described genetic patterns were marginally congruent with our morphometric pattern, though geographic distance had a stronger effect on morphology. Shape change (elongation) was correlated with latitudinal clinal variation. The morphometrical analysis proved to be an important tool for evaluating the components of shell‐shape variation in mussels and to document association patterns with geographical and ecological variables. Such patterns are useful to establish a wide field of work, including sexing, stock recognition, traceability studies and productive management in general.     

Heritability of body size in the Chilean blue mussel (Mytilus chilensis Hupé 1854): effects of environment and ageing

Selection, either natural or artificial, induces an inter‐generational response only when the trait exhibits additive genetic variation. An index of additive genetic variation is narrow‐sense heritability (h²): the ratio between additive genetic variance and phenotypic variance. Here, we present narrow‐sense heritabilities for mass and size in the Chilean blue mussel Mytilus chilensis at different ages and in three different populations. We found that h² changed with age and that maternal‐non‐additive variance was high, generating relatively low estimates of h² in most cases. Our results, together with previous studies, suggest that genotype‐by‐environment interaction does not appear to play a significant role. However, we found that non‐additive and common environmental variance are important determinants of phenotypic morphological variation in body size in M. chilensis. Further studies are needed to establish the precise contributions of these sources of variation, to assess the real potential for response to selection.     

Conservation genetics of the endangered depressed river mussel,Pseudanodonta complanata,using amplified fragment length polymorphism (AFLP) markers

• 1. Genetic analysis is increasingly recognized as a key tool for understanding demography, and is particularly useful for describing patterns of gene flow between putative populations. Most effort has been directed towards vertebrate systems, where any one study often benefits from marker development in related species. The greater diversity of invertebrate taxa presents a challenge, but amplified fragment length polymorphism (AFLP) markers offer a solution, yielding high levels of polymorphism and no prior knowledge of a species' genome.
• 2. AFLP markers have been used to analyse an unusual metapopulation of an invertebrate, the endangered freshwater mussel, Pseudanodonta complanata, sampled from river systems across the UK. This was done to assess the extent to which individual river systems were genetically isolated from one another.
• 3. The results show patterns of weak genetic differentiation across the UK, with one hydrologically isolated population in the south west showing clear genetic differentiation from the rest of the country. However, the UK population as a whole exhibits significant isolation by distance, particularly when one population subject to fish stocking is removed, this population probably being seeded with mussel glochidia larvae which use fish as vectors. Genetic estimates of inbreeding reveal a complicated pattern in which inbreeding peaks at intermediate densities. High‐density populations may be genetically diverse due to their size, while the lowest density populations may represent transient groups of emigrants from other, larger populations.
• 4. The findings show that limited gene flow does exist between some but not all river systems. The isolation of the south‐west population indicates that dispersal is variable and should not be assumed to be present. Waterways that remain hydrologically isolated may require special attention in conservation programmes as they can harbour genetically distinct populations. The balance between river management activities and conservation priorities therefore needs careful consideration. Copyright © 2010 John Wiley & Sons, Ltd.

     

Reproductive cycle,collection and early growth of Aulacomya ater,Molina 1782 (Bivalvia: Mytilidae) in northern Chile

We evaluated the reproductive cycle of Aulacomya ater at Caleta Punta Arenas (Antofagasta, Chile), finding two important spawning periods (August–September and October–November) associated with declining water temperatures. Mytilid collectors were installed at Caleta Punta Arenas and Caleta Errázuriz (250 km further south) in November and then extracted in consecutive time periods. The results showed settlements of A. ater along with Choromytilus chorus (Molina) and Semimytilus algosus (Gould). An analysis of the spat size structure from each period revealed different micro‐cohorts for each species; the micro‐cohorts of C. chorus were predominant. Daily growth rates were estimated using the average sizes of the micro‐cohorts on two consecutive dates. Although the daily growth rates did not vary significantly between sites for a given species, these rates were lowest for A. ater and highest for S. algosus. The abundance and greater growth of C. chorus caused interspecific competition with A. ater that was detrimental to the survival of the latter. We hypothesize the existence of a metapopulation of A. ater in northern Chile that would explain the settlement of four micro‐cohorts on collectors after 28 days at Caleta Punta Arenas, and the settlement recorded after 80 days at Caleta Errázuriz.     

PCR-based nuclear and mtDNA markers and shell morphology as an approach to study the taxonomic status of the Chilean blue mussel,Mytilus chilensis (Bivalvia)

Most recent authors have called the Chilean blue mussel (formerly Mytilus chilensis) Mytilus edulis. Mussels from four nominal species (Mytilus edulis, M. trossulus, M. galloprovincialis and M. chilensis) were collected from the eastern coast of Newfoundland, Canada, New Zealand and the southern coast of Chile. Canonical discriminant analysis of selected shell morphometrical characters showed that although there is some overlap in canonical variates, the three nominal species, M. edulis, M. trossulus and M. chilensis can be morphologically divided into three distinct groups. The two nuclear-DNA markers (ITS and Glu-5) and the mtDNA marker studied indicate that the nuclear and mitochondrial genomes of M. edulis and M. trossulus are different. M. edulis, M. galloprovincialis and M. chilensis share similar restriction fragment patterns for the mtDNA and for the ITS nuclear-DNA marker, while the Glu-5 polymerase chain reaction (PCR) assay showed that the M. edulis and M. chilensis genotypes disagree, producing species-specific banding patterns that can be used as a diagnostic marker between the two nominal species. The molecular and morphometric data reported here give more evidence to support the view of other authors that the Chilean blue mussel should be included as M. edulis subspecies: Mytilus edulis chilensis.     

Genetic structure and phylogeographic relationships of the Bellamya complex: A nascent aquacultural snail in the Pearl River basin,China

The current genetic structure of a species is determined by both historical demographics and contemporary gene flow among populations. As an economically important snail in China, Bellamya has attracted much attention for its breeding and aquaculture and has provided a good study system for this theoretical structure. Our results showed that high genetic diversity occurred in most populations distributed in the Pearl River basin, except for the population in Nanning, Guangxi Zhuang Autonomous Region. A lack of distinct genealogical branches or geographic clades was found for the Bellamya complex across the Pearl River basin. Nevertheless, low but significant genetic structure and high differentiation were detected between Anshun (in Guizhou Province) and other geographic populations segregated by the Yunnan–Guizhou Plateau, suggesting that geographic barriers exist around this region, while this scenario was not applicable to the populations in Yuxi, Yunnan Province. The demographic history described a relatively stable pattern before the last glacial period, but the effective population sizes have drastically decreased since the late Pleistocene. The lack of genetic structure across the Pearl River basin is mainly attributed to a high level of gene flow by passive migration due to flooding and anthropogenic and animal translocation. The vicariance caused by the uplift of the Yunnan–Guizhou Plateau during the early Pleistocene likely contributed to the divergence of the plateau and plain sublineages in the Pearl River basin. A genetic diversity and phylogeography analysis are valuable to developing further guidance on breeding and conservation strategies for Bellamya germplasm resources.     

Genetic structure of Irish freshwater pearl mussels (Margaritifera margaritifera and Margaritifera durrovensis): Validity of subspecies,roles of host fish,and conservation implications

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Population genetic structure and differential selection in mussel Mytilus chilensis

This study examines the genetic connectivity between natural banks of Chilean mussel, Mytilus chilensis, located in Reloncaví Fjord. This sector is the principal source of seed for commercial farming and has the second‐largest aquaculture production volume in the country. The objects of this work are as follows: (1) to estimate the degree of connectivity between patches (microscale) located in the intertidal/subtidal zones, evaluating the presence of selection processes; and (2) to identify connectivity patterns by gene flow between subpopulations (mesoscale) in order to determine whether they all correspond to a common population (meta‐population). We analysed individuals distributed in the intertidal and subtidal zones of five locations by sequencing the mitochondrial cytochrome oxidase I gene and eight nuclear DNA microsatellite loci. Comparison of the two tidal zones presented differences revealed by the COI gene. The locations presented low genetic differentiation; however, differences were found in both markers at the mouth of the fjord. The differences between the tidal zones may result from differentiated natural selection processes between the intertidal and subtidal environments, with those in the intertidal subjected to greater selective pressure. There is effective connectivity between the locations, facilitated by the capacity for dispersion of the larvae and certain oceanographic processes, which would also explain the differences observed in the location at the mouth of the fjord. Because these banks sustain mussel aquaculture activity throughout the country, it is important to take measures to ensure their proper maintenance, observing all the indicators including their genetic diversity and structure.     

Genetic diversity of freshwater pearl mussel (Hyriopsis cumingii) in populations from the five largest lakes in China revealed by inter-simple sequence repeat (ISSR)

Triangle sail mussel (Hyriopsis cumingii) is the most important mussel species commercially exploited for freshwater pearl culture in China. Its genetic diversity was studied among populations from the five largest freshwater lakes of China, Poyang Lake (PY), Dongting Lake (DT), Taihu Lake (TH), Hongze Lake (HZ), and Chaohu Lake (CH), by the polymorphism of the inter-simple sequence repeats (ISSRs). Polymerase chain reaction (PCR) detections showed that a total of 62 loci were amplified from eight primers; of those, 31.88%, 31.15%, 31.03%, 27.27% and 26.92%, respectively, were polymorphic in each of the five populations across all genotypes tested. The average heterozygosities were 0.4747, 0.3274, 0.2366, 0.2099 and 0.2018 in each of these populations from PY, TH, DT, CH and HZ, respectively. Phylogenic analyses showed that PY and TH populations clustered with CH and HZ and formed a group, while the DT population on its own formed a separated branch. The smallest distance (0.0404) was scored between PY and TH populations, indicative of their closest relationship; the biggest distance (0.2438) was found between PY and DT populations, suggesting their greatest divergence. The present study provided genetic basis for managing mussel stocks from these lakes separately to best preserve the genetic diversity of H. cumingii. On the other hand, since the population in PY displayed the highest genetic diversity, it may be used preferably in future selective breeding to improve pearl yield and quality.     

A biogeography‐based management for Mytilus chilensis: The genetic hodgepodge of Los Lagos versus the pristine hybrid zone of the Magellanic ecotone

1. This study was intended to identify mussel species from the Magellanic ecotone, quantifying interspecific hybridization within Mytilus and depicting the genetic architecture of Mytilus chilensis in its South Pacific range.
2. The analysis comprises the sub‐Antarctic Magallanes Province as a rich ecotone of climates, ecosystems and admixed faunas embedded among the biogeographic regions of the Pacific, the Atlantic, and Antarctica.
3. Highly conserved molecular sequences within species were used to identify species, and polymorphic microsatellites were used to calculate the genetic architecture of M. chilensis. The absence of the invasive species Mytilus galloprovincialis from the M. chilensis range clarifies previous doubts on its expansion southward from the Arauco Gulf. The ubiquitous presence of the typical Glu‐5′‐Me‐15/16 PAP allele of Mytilus trossulus in the Northern Hemisphere might come from hull biofouling, but rather it seems to be an ancient polymorphism conserved in M. chilensis as occurs in blue mussels from other regions of the Southern Hemisphere. There is a very limited connectivity (F_ST = 0.167) between two latitudinal gene pools of M. chilensis that are highly divergent in composition, architecture, and ecological relevance.
4. Fifty years of aquaculture enhancement in Los Lagos explains its high diversity and genetic heterogeneity among patches, so its mussel management should seek a balance between exploitation and environmental sustainability.
5. The Magellanic ecotone bears a pristine M. chilensis × Mytilus edulis platensis hybrid zone around the Southern Cone, larger (450 km) than previously thought. Such a hybrid zone permeates one of the last remaining wilderness areas in the world (Cape Horn Biosphere Reserve) and is a natural laboratory for addressing introgression, hybridization, and evolution of Mytilus spp. genomes in their last southern frontier.

     

Genetic relationship between Litopenaeus setiferus (L.) and L. schmitti (Burkenroad) determined by using 16S mitochondrial sequences and enzymatic analysis

Genetic differentiation and variability data of two populations of two species of shrimp (Litopenaeus setiferus (L.) and L. schmitti (Burkenroad)) have been obtained by electrophoretic analysis and by analysis of 16S mitochondrial DNA. Using eight polymorphic enzymes, the genetic distance (GD) between the two species was 0.165. The GD between L. setiferus populations was 0.0057 and between L. schmitti populations it was 0.0034. The greatest differentiation was found within, rather than between, populations, although the differentiation value between Mexican and Cuban populations varied in accordance with the geographic distance and ecological characteristic of each. We found a high similarity between these two species with a bimodal distribution of the loci with respect to genetic identity. The homology percentages for gene 16S fragments were compared with those from six different shrimp species (L. vannamei, L. stylirostris, Farfantepenaeus notialis, Metapeneopsis lamellata) and Artemia salina. Ninety‐seven percent of identity was found by analysis of a 409 bp of 16S mitochondrial DNA. With these values a phylogenetic tree was made using parsimony criteria. The GDs obtained with this method confirm the classification proposed by Pérez‐Farfante & Kensley (1997) .     

Quantifying the ecological niche overlap between two interacting invasive species: the zebra mussel (Dreissena polymorpha) and the quagga mussel (Dreissena rostriformis bugensis)

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Genetic diversity and population structure of the veined rapa whelk <Emphasis Type="Italic">Rapana venosa</Emphasis> along the coast of China based on microsatellites

Knowledge of the genetic diversity and population structure of marine species across their distribution range is essential for the formulation of effective management and conservation strategies. The veined rapa whelk Rapana venosa is a commercially important fisheries resource in East Asia. To provide basic information for fisheries management and artificial breeding, research on the genetic diversity and population structure of R. venosa across the species’ range in China was carried out using 11 microsatellite loci. All of the 11 populations showed high levels of genetic diversity. Shallow, but significant genetic divergences were detected among these populations, suggesting two geographic subdivision groups of R. venosa along the Chinese coast, with nine populations in northern China forming one group and the other two populations (Rizhao and Zhoushan) forming another. A significant isolation by distance pattern was observed in this species (r = 0.412, P = 0.012), indicating that isolation by geographic distance may play an important role in population differentiation. These results could provide valuable genetic information for the fishery management of R. venosa.     

The potential for Chilean oysters, Tiostrea chilensis (Philippi, 1845), from two populations in northern New Zealand as a source of larvae for aquaculture

The use of the Chilean oyster. Tiostrea chilensis (Philippi. 1845), for aquaculture has been hampered by difficulty in obtaining commercial quantities of larvae due to the low fertility of the existing broodstock of this species taken from well-known populations in Chile and the South Island of New Zealand. The larval productions of two wild populations of this oyster in northern New Zealand were assessed as potential alternative sources of broodstock for aquaculture. The study found both populations produced larvae from young, small oysters, and that a much larger proportion of the population was brooding larvae each year than has been reported elsewhere. The mean fertility of one of these populations, at 71 056 ± 3701 (SE) larvae per oyster, was the highest reported for any population of this species. The significantly higher fertility of these populations makes them well suited for further development as broodstock for aquaculture.     

Genetic connectivity of the South American fur seal (Arctocephalus australis) across Atlantic and Pacific oceans revealed by mitochondrial genes

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Capricious bioinvasions versus uncoordinated management strategies: how the most unlikely invaders can prosper under the current UK legislation framework

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入侵地和原产地太湖新银鱼群体遗传结构

为了探讨太湖新银鱼快速适应新环境和快速入侵的遗传学机制,本研究利用10个微卫星位点对5个入侵地和2个原产地的群体遗传结构进行了分析。遗传多样性参数结果显示,入侵地滇池、邛海、抚仙湖和三峡库区群体的遗传多样性水平比原产地高,入侵地洱海群体的遗传多样性水平低于原产地太湖而高于巢湖群体,原产地巢湖群体的遗传多样性最低。遗传距离和UPGMA聚类结果表明邛海群体和其他群体的遗传关系最远,太湖与抚仙湖的遗传关系最近。ANOVA显示大多数遗传变异存在于太湖新银鱼群体内(95.78%),群体间的遗传变异为4.22%,固定系数(Fst=0.0422)显著,表明太湖新银鱼群体间存在显著的小尺度遗传分化,两两遗传分化指数也证实了这一点。MVSP主成分分析显示邛海、三峡库区、巢湖和滇池群体有明显的分化。由此推断,高水平的遗传多样性和显著的遗传结构差异性可能是太湖新银鱼成功入侵的重要原因。     

Assessing the benefits of the marine protected area of Punta Coles,southern Peru (south-east Pacific) on productivity of conspicuous benthic species using pre-image population analysis

1. The coastal marine protected ecosystem at Punta Coles (as a part of the Reserva Nacional de Islas, Islotes y Puntas Guaneras) is located in a highly exploited area in southern Peru and contains several commercial, bioengineering and other benthic species.
2. Pre-image population analysis was used to estimate the transient values of intrinsic growth rate (r) based on biomass and density time series as a proxy of productivity to assess the effectiveness of protection.
3. The outcomes obtained showed that the gastropods Concholepas concholepas, Fissurella latimartiginata and the tunicate Purya chilensis showed a reduction of productivity during recent years, whilst the sea urchin Loxechinus albus, the barnacle Balanus laevis and the bivalve Semimytilus algosus showed an opposite pattern. Several species exhibited a chaotic dynamic, coinciding with the highest productivity values. In 2016 and 2017, several species exhibited a reduction of their abundance which could be delayed responses explained by changes in oceanographic conditions (reduction of coastal upwelling), La Niña event and illegal harvest.
4. The above notwithstanding, the results suggest that effective protection of benthic species in the protected ecosystem of Punta Coles have been partially accomplished. Therefore, this work could be considered a baseline study, permitting the subsequent monitoring of productivity of the main species inhabiting the coastal area of Punta Coles.
5. Pre-image population analysis could be used as a complimentary analytical tool since it enables the evaluation of transient population parameters (e.g. productivity) thus aiding population management, conservation and monitoring decisions.

     

Interannual and spatial variation in the population genetic composition of young‐of‐the‐year Pacific ocean perch (Sebastes alutus) in the Gulf of Alaska

Little is known about the population structure of Alaskan rockfishes, including Pacific ocean perch (POP, Sebastes alutus), and how persistent and variable oceanographic features may influence their structures. Moreover, early life history information is sparse for many species. We used data from 14 microsatellite loci to characterize the genetic structure of young‐of‐the‐year Pacific ocean perch collected during 1998–2003 from the Gulf of Alaska and Bering Sea. Broad‐scale geographic variation in genetic structure of the young‐of‐the‐year (F_ST = 0.005, P < 10^?4) had similarities to that observed in a previous adult study. The overall correlation between genetic and geographic distance (isolation by distance) was nearly identical to that observed in the adults. Fine‐scale geographic divergence was also observed and may be the result of oceanographic circulation features within the Gulf of Alaska. Interannual variation (between cohorts) at locations sampled in more than one year is consistent with variable oceanography and fine‐scale population structure rather than the influence of a sweepstakes effect. The similarities of the young‐of‐the‐year with the adults and the pattern of genetic divergence confirm that dispersal of Pacific ocean perch is limited in all life stages.