A review of the biology and status of Cape Fold Ecoregion freshwater fishes

1. Mediterranean climate regions are globally recognized as hotspots of endemism in fishes; however, these unique assemblages are increasingly threatened by human mediated impacts including water abstraction, damming and non‐native species introductions.
2. The Cape Fold aquatic ecoregion (CFR) of South Africa supports an assemblage of range‐restricted endemic freshwater fishes, the majority of which are conservation priorities because they are under severe threat of extinction. Effective conservation and management are constrained by the lack of readily available information on this imperilled group of fishes because research efforts over the last century have been temporally disjointed and relatively uncoordinated.
3. This review provides an exhaustive appraisal of published literature on the taxonomy, biogeography, life history, ecology and physiology of freshwater fishes in the CFR, and the human impacts that affect them. Its aim is to direct future research needs for effective management and conservation of this imperilled group.
4. Only 103 peer‐reviewed articles on CFR fishes were recorded and the majority of available research is on taxonomy and biogeography (40.8%), followed by ecological investigations (22.3%), conservation (19.4%) and human impacts (17.5%).
5. Despite a plethora of studies on taxonomy and biogeography, recent genetic evidence suggests that fish diversity in the CFR has been severely underestimated and requires urgent attention. Human impacts severely threaten the existence of many native CFR fishes and require further study. Information on the biology and ecology of CFR fishes is limited to studies on selected species; of particular note is the lack of physiological information which is particularly pertinent given projected climate change scenarios.

     

Heads you win,tails you lose: Life‐history traits predict invasion and extinction risk of the world's freshwater fishes

1. Freshwater fishes have the distinction of being both a highly imperilled taxonomic group as well as one that has produced many invasive species with widespread ecological impacts. Faced with the difficult task of identifying those species with the greatest need for management action, ecologists have turned to using predictive suites of ecological and life‐history traits to provide reasonable estimates of fish invasion and extinction risk. Whether traits associated with invasiveness are the inverse of those associated with imperillment, known as the ‘two‐sides‐of‐the‐same‐coin’ hypothesis, remains unclear.
2. A global trait analysis (including maximum total body size, longevity, size at maturation, age at maturation, fecundity and egg size) for 6293 freshwater fishes was conducted to examine the trait correlates of species proneness to invasion or extinction. A meta‐analytical procedure was deployed using univariate and multivariate trait analyses that accounted for the effects of shared phylogeny.
3. Mean trait differences (measured as Hedges' d effect size) were found between invasive and threatened species when compared with native species, thus supporting the two‐sides‐of‐the‐same‐coin hypothesis for freshwater fish. Invasive species were characterized by larger body size, greater longevity, delayed maturation and higher fecundity than threatened species. Furthermore, invasive species were found to display greater trait variability compared with threatened species, suggesting that different traits may be selected at different stages of the invasion process (from pathway entrainment to establishment) whereas more specific trait combinations may predispose species to higher extinction risk.
4. The present study demonstrated a strong trait basis to global‐scale invasion risk and extinction vulnerability for freshwater fishes. Given that both time and resources are too limited for detailed species‐by‐species assessments, the results suggest that trait correlates provide a reasonable estimate of invasion and extinction risk that can inform more targeted and proactive conservation strategies.

     

Assessing conservation priorities of endemic freshwater fishes in the Tropical Andes region

1. Assessing the effectiveness of protected areas for sustaining species and identifying priority sites for their conservation is vital for decision making, particularly for freshwater fishes in South America, the global centre of freshwater fish diversity. Several conservation planning studies have used threatened freshwater fishes or species that are vulnerable to climate change as conservation targets, but none has included both in priority‐setting analysis.
2. The objectives of this study were to identify gaps in the coverage of the existing protected areas in representing the endemic freshwater fishes of the Tropical Andes region, and to identify conservation priority areas that adequately cover threatened species and species vulnerable to climate change.
3. Data on 648 freshwater fishes from the Tropical Andes were used to identify gaps in the protected area coverage, and to identify conservation priority sites under three scenarios: (i) prioritize threatened species; (ii) prioritize species that are vulnerable to climate change; and (iii) prioritize both threatened species and species vulnerable to climate change.
4. A total of 571 species (88% of all species) were not covered by any protected areas; most of them are restricted to ≤10 catchments. To represent both threatened species and species vulnerable to climate change in the third scenario, 635 catchments were identified as priority areas, representing 26.5% of the study area. The number of irreplaceable catchments for this scenario is 475, corresponding to 22.5% of the total area.
5. The results of this study could be crucial for designing strategies for the effective protection of native fish populations in the Tropical Andes, and for planning proactive climate adaptation. It is hoped that the identification of priority areas, particularly irreplaceable catchments, will help to guide conservation and management decisions in the Andean region.

     

Occupancy dynamics of rare cyprinids after invasive fish eradication

1. The eradication of invasive species is a management strategy implemented to eliminate adverse impacts of invaders on native species communities. After eradications, follow‐up studies are done to confirm eradication of the invasive species and the short‐term recovery of the native species, but long‐term monitoring to confirm full population recovery and stability is often not completed.
2. In this study, long‐term monitoring of native fishes was carried out over 5 years after the eradication of an invasive fish from the Rondegat River, South Africa. Forty‐six sites distributed along four river sections were sampled for presence/absence using underwater cameras and snorkel surveys. Density data were collected by snorkel surveys.
3. Using multi‐season occupancy models, the annual probability of colonization and local extinction of the native fishes and annual rate of change in occupancy along the river were estimated. Changes in native fish densities across time and across the control and treatment sections were analysed using Kruskal–Wallis analysis, followed by Dunn's post‐hoc test.
4. Probability of colonization and local extinction differed for each native fish species and may have been affected by extrinsic factors, such as rainfall, and intrinsic density‐dependent factors, hypothesized from the density data. The occupancy rates of change revealed that the two Near Threatened fish species have reached an occupancy dynamic equilibrium but the Endangered fish has not, suggesting that other conservation efforts may be needed.
5. Long‐term monitoring of native fishes after an eradication programme has confirmed the successful removal of the invader and the recovery and stability of the community. However, successful eradication was not sufficient for full recovery of all species; additional conservation management strategies are needed to secure the population stability and persistence of endangered fishes. We recommend that eradication programmes, regardless of locality, should employ long‐term monitoring to ensure full recovery of a native fish community.

     

The status and distribution of a newly identified endemic galaxiid in the eastern Cape Fold Ecoregion,of South Africa

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Persistence of native fishes in small streams of the urbanized San Francisco Estuary,California: acknowledging the role of urban streams in native fish conservation

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Potential impacts of non‐native fish on the threatened mahseer (Tor) species of the Indian Himalayan biodiversity hot spot

1. Mahseer (Tor) fish species are critical components of locally adapted freshwater food webs across the Indian Himalayan biodiversity hotspot; however, multiple human stressors compounded by climate change have significantly depleted their populations over recent decades.
2. Mahseer species are now considered locally vulnerable or endangered in many regions. Hydropower projects in particular have fragmented populations, impairing genetic exchange, obstructing migratory paths, and changing the structure and functioning of riverine habitats, especially of formerly fast‐flowing rivers.
3. Worryingly, a literature survey and group discussions reveal that the increasing spread of non‐native fish species further compounds threats to mahseer and overall freshwater ecology. A better understanding of the current distribution, habitat requirement, and dispersal of non‐native fish is therefore essential to manage the growing threats to mahseer in the Indian Himalayan region.

     

Effect of an intensive mechanical removal effort on a population of non‐native rainbow trout Oncorhynchus mykiss in a South African headwater stream

1. Invasions by non‐native species can compromise the conservation value of otherwise pristine headwater streams. While both developed and developing countries recognize this threat, few of the latter have suitable budgets to implement control programmes.
2. This study assessed the effectiveness of a mechanical project to remove non‐native rainbow trout Oncorhynchus mykiss from a 6 km section of the upper Krom River, a small headwater stream in the Cederberg Mountains in South Africa's Cape Floristic Region (CFR).
3. From October 2013 to February 2014, 354 O. mykiss were removed by angling (58%), fyke netting (28%) and gill netting (14%). This resulted in a marked reduction, but not eradication, of the O. mykiss population (fish relative abundance decreased from 0.53 ± 0.09 fish per net per night in October 2013 to 0.21 ± 0.09 fish per net per night in February 2014). Following the cessation of manual removals, the relative abundance of O. mykiss had increased to 0.56 ± 0.18 fish per net per night by March 2016, suggesting that without sustained removal effort, the population will rapidly return to its pre‐removal abundance level.
4. Further work is needed to refine the methodology and test the effectiveness of mechanical removal of non‐native freshwater fish in a variety of ecological settings in the CFR. This approach holds potential for meeting the dual goals of reducing the ecological impacts of non‐native fishes and generating employment opportunities in line with the policy objectives of developing nations.

     

Fish conservation in freshwater and marine realms: status,threats and management

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The demography of introduction pathways,propagule pressure and occurrences of non‐native freshwater fish in England

• 1. Biological invasion theory predicts that the introduction and establishment of non‐native species is positively correlated with propagule pressure. Releases of pet and aquarium fishes to inland waters has a long history; however, few studies have examined the demographic basis of their importation and incidence in the wild.
• 2. For the 1500 grid squares (10×10 km) that make up England, data on human demographics (population density, numbers of pet shops, garden centres and fish farms), the numbers of non‐native freshwater fishes (from consented licences) imported in those grid squares (i.e. propagule pressure), and the reported incidences (in a national database) of non‐native fishes in the wild were used to examine spatial relationships between the occurrence of non‐native fishes and the demographic factors associated with propagule pressure, as well as to test whether the demographic factors are statistically reliable predictors of the incidence of non‐native fishes, and as such surrogate estimators of propagule pressure.
• 3. Principal coordinates of neighbour matrices analyses, used to generate spatially explicit models, and confirmatory factor analysis revealed that spatial distributions of non‐native species in England were significantly related to human population density, garden centre density and fish farm density. Human population density and the number of fish imports were identified as the best predictors of propagule pressure.
• 4. Human population density is an effective surrogate estimator of non‐native fish propagule pressure and can be used to predict likely areas of non‐native fish introductions. In conjunction with fish movements, where available, human population densities can be used to support biological invasion monitoring programmes across Europe (and perhaps globally) and to inform management decisions as regards the prioritization of areas for the control of non‐native fish introductions.

© Crown copyright 2010. Reproduced with the permission of her Majesty's Stationery Office. Published by John Wiley & Sons, Ltd.     

Predation on native fish eggs by invasive round goby revealed by species‐specific gut content DNA analyses

1. Conservation of riverine fish often aims to improve access to spawning grounds and restore longitudinal connectivity by removing migration barriers, and involves substantial investments. However, these investments also enable non‐native predators to invade upstream into spawning areas and potentially adversely affect the recruitment of threatened freshwater fish through egg or fry predation.
2. Detecting egg predation is often challenging. Visual inspections of fish gut contents may underestimate predation of soft materials such as eggs and fry, which limits the discovery of predators preying upon these life‐stages. DNA‐based detection assays may offer a more sensitive tool to assess predation of soft materials.
3. A conservation issue was confirmed by developing and applying a species‐specific DNA‐based detection assay: invasive round goby (Neogobius melanostomus) prey on the eggs or fry of the threatened common nase (Chondrostoma nasus) in Switzerland.
4. DNA‐based detection assays were also developed for five other valuable native fish species, including endangered salmonid and cyprinid river spawners. The applicability of the assays was confirmed in a series of laboratory and field feeding experiments involving eggs and fish tissue. In addition, this work provides a guiding framework for conservation managers regarding the use and applicability of different DNA‐based detection approaches for gut content analysis.
5. The results of this study could inform local conservation measures – such as temporary reductions in the density of round goby at spawning sites prior to spawning – and demonstrate how targeted application of species‐specific molecular markers may advance freshwater fish management.

     

Adapting a multi‐species tool for single‐species impact assessments: Managing fishes at risk in Canada

1. To assess the impacts of human activity on fishes and fish habitat, impact assessment tools use single‐ and multi‐species approaches depending on the ecological and socio‐economic objectives. In Canadian aquatic ecosystems, single‐ and multi‐species impact assessments are guided by the Species at Risk Act and Fisheries Act, respectively. Yet, for species protected under the Species at Risk Act, the sparse data often require alternative approaches to risk assessment.
2. The goal of this study was to evaluate whether a database‐derived multi‐species tool – the Habitat Ecosystem Assessment Tool (HEAT) – can be used for single‐species impact assessments. Using an empirical example of proposed drain maintenance in a tributary of Lake St. Clair, the net loss of suitable habitat was evaluated across six conservation targets, ranging from single species, such as the pugnose shiner (Notropis anogenus) and the yellow perch (Perca flavescens), to the entire fish assemblage. Model outcomes were compared across various habitat suitability indices, spatial resolutions, and environmental habitat layers.
3. The net loss of suitable habitat varied widely across conservation targets and was greatest for the rare specialist species (pugnose shiner). Single‐species conservation targets were more sensitive to variation in spatial resolution and uncertainty in model input parameters. The results of this study emphasize that single‐ and multi‐species conservation targets should not be considered equal, especially when species differ in abundance and niche breadth.
4. This study demonstrates the flexibility of HEAT for evaluating potential impacts of human disturbance on fishes and their habitat. Future development of this tool should expand beyond physical habitat, to include other factors relevant to species distribution and survival (e.g. biotic interactions).

     

Status of galaxiid fishes in Tasmania,Australia: conservation listings,threats and management issues

• 1. Fish of the family Galaxiidae are restricted to the southern hemisphere where they occupy a diverse array of habitats ranging from over 2000 m in elevation to sea level. Some species are diadromous and, hence, freshwater, estuarine and marine habitats are used during their life‐cycle; other species complete their entire life‐cycles in freshwater environments.
• 2. Tasmania has a diverse galaxiid fauna that accounts for 64% of native freshwater fish species found on the island. The Tasmanian galaxiid fauna is characterized by high species richness (5 genera and 16 species), endemism (11 species), restricted distributions, and non‐diadromous life histories (11 species).
• 3. The galaxiid fauna of Tasmania has significant conservation status with 69% of species considered ‘threatened’. The conservation status of the fauna is recognized at State, national and international levels.
• 4. The key threats to galaxiids in Tasmania are exotic species, hydrological manipulations, restricted distributions, general habitat degradation and exploitation of stocks.
• 5. Although work has recently been undertaken to conserve and manage Tasmanian galaxiid populations, the fauna is still thought to be imperilled. Knowledge gaps that need to be addressed include the biology and ecology of most species (e.g. reproductive biology, life histories, habitat use and requirements) and impacts of habitat manipulations, as well as mechanisms and impacts of interactions with exotic species. Techniques to monitor accurately the status of galaxiid species and their populations need to be developed and the coexistence of some galaxiids with introduced salmonids should also be examined.

Copyright © 2005 John Wiley & Sons, Ltd.     

Population prioritization for conservation of imperilled warmwater fishes in an arid‐region drainage

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Reconstruction of the historical distribution ranges of imperilled stream fishes from a global endemic hotspot based on molecular data: Implications for conservation of threatened taxa

1. Understanding historical distribution patterns of freshwater fishes prior to human impacts is crucial for informing effective strategies for biodiversity conservation. However, incomplete information on species occurrence records, the existence of cryptic species and sensitivity to small sample sizes limit the application of historical records in natural history collections as well as conventional species distribution modelling algorithms to infer past distributions of species.
2. This study used molecular data as an alternative and objective approach to reconstruct the historical distribution ranges of four stream fishes from the Breede River system in the Cape Fold Ecoregion, a global hotspot of imperilled endemic freshwater biodiversity in southern Africa.
3. The study used 249 occurrence records and 208 mitochondrial cytochrome b sequences to reconstruct the potential historical ranges of four taxa: Galaxias sp. ‘zebratus nebula', Galaxias sp. ‘zebratus Riviersonderend', Pseudobarbus sp. ‘burchelli Breede' and Pseudobarbus skeltoni.
4. All four taxa historically had broader distribution ranges across the Breede River system before human impacts, but they have suffered severe attrition as the main‐stem populations have been extirpated.
5. The severe decline in the historical ranges of these four taxa is a result of multiple impacts, particularly hydrological modification, habitat degradation and the introduction of non‐native species, which are also global challenges for freshwater ecosystems.
6. The approach presented in this study has great potential for reconstructing historical ranges of stream‐dwelling taxa from disparate regions where fragmentation has resulted from human‐mediated impacts. This information is crucial for identifying appropriate conservation strategies such as river rehabilitation and eradication of non‐native species, as well as guiding reintroductions and informing assisted gene flow where these are deemed necessary interventions.

     

Fish hosts of the freshwater mussel Unio foucauldianus Pallary, 1936

1. The life cycle of Unio foucauldianus Pallary, 1936, a critically endangered freshwater mussel species (Bivalvia: Unionida), includes a parasitic phase using fish as hosts. Therefore, to develop more efficient conservation strategies it is essential to know which are the suitable fish hosts of U. foucauldianus.
2. In this study, two approaches were used to assess the fish hosts of U. foucauldianus: the determination of infestation rates of fishes under natural conditions through monthly sampling (from January to June) in the Laabid River (Oum Rbia basin) and the N'Fis River (Tensift basin), and artificial infestation in laboratory trials using fish species from both rivers.
3. The natural infestation of fish was detected from February to June, with a peak in May. Fully metamorphosed juveniles were only detected in native fish species, i.e. Luciobarbus ksibi (Boulenger, 1905), Carasobarbus fritschii (Günther, 1874), Luciobarbus zayanensis Doadrio, Casal‐lopez & Yahyaoui, 2016, Labeobarbus maroccanus (Günther, 1874), and Luciobarbus magniatlantis (Pellegrin, 1919). The two non‐native fish species used do not function as effective hosts.
4. Given the increasing human pressure on native fish species in the Mediterranean biodiversity hotspot, including the increased number of non‐native fish introductions, urgent conservation measures are discussed for this and other freshwater mussel species.

     

Native and introduced fish community structure in a freshwater swamp forest: Implications for conservation and management

1. Freshwater swamp forests are poorly studied but highly threatened freshwater habitats, especially in Southeast Asia. Very little is known about the environmental factors associated with the assembly and spatial distribution of fish communities in these acid‐water habitats, although such knowledge is of immense importance for conservation and management.
2. Fish assemblages in 40 stream sites throughout the Nee Soon Swamp Forest, Singapore, were surveyed using push nets from October 2013 to November 2014. The Nee Soon Swamp Forest is the last substantial remnant of freshwater swamp forest habitat in Singapore, and today it is the only refuge for many of the native forest‐specialist freshwater fish species.
3. The overall diversity and richness of the fish community are positively correlated with depth, stream order, and canopy cover, and are negatively correlated with distance to a connected reservoir, mean velocity, and silt substrate. Observed patterns indicate that three main communities exist, each with distinct associated species and environmental parameters. One is a novel community of introduced species and non‐forest specialist native species found only at the outskirts (downstream portion) of the swamp forest, close to a reservoir connection that drains the swamp, whereas the other two communities are found in the interior of the swamp forest and harbour mostly forest‐specialist native species of restricted distribution and high conservation value.
4. The community on the outskirts may be a potential route for introduced species to spread and establish populations deeper within the swamp forest. At present the native community within the swamp forest appears to be healthy, but constant monitoring is needed to ensure that the native community is not threatened by loss of habitat or introduced species.

     

Fish invading deserts: non‐native species in arid Moroccan rivers

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From the lab to the river: Determination of ecological hosts of Anodonta anatina

1. Coextinction is the simplest form of secondary extinction and freshwater mussels (Bivalvia, Unionida) may be particularly prone to this phenomenon as their life cycle includes an obligatory parasitic larval stage on fish hosts.
2. The main aims of this study were to determine the possible ecological fish hosts of Anodonta anatina (Linnaeus, 1758) in several rivers of the Douro basin in northern Portugal and to assess possible spatial and temporal differences in glochidial (larval) loads. In order to achieve this, electrofishing was conducted from December to April, the fish fauna was characterized, and levels of infestation with A. anatina glochidia were determined.
3. Native cyprinid species, mainly Luciobarbus bocagei (Iberian barbel) and Squalius carolitertii (northern Iberian chub), together with the non‐native Lepomis gibbosus (pumpkinseed sunfish) and Alburnus alburnus (common bleak), were found to have the highest glochidial loads. Clear differences in infestation between rivers and throughout time were detected, with an infestation period from January to March, and with the Tâmega River having the highest prevalence.
4. Anodonta anatina is able to infest a variety of fish species, and this together with earlier studies showed that the metamorphosis into juveniles occurs mainly in native cyprinid species, although non‐native species like common bleak can also be considered suitable hosts. However, the larvae infesting other non‐native species, such as the pumpkinseed sunfish, do not metamorphose and can be considered ‘dead ends’.
5. Overall, the results reported here are important for the conservation of A. anatina (and other unionoid species) because several Iberian rivers (and worldwide) have been subjected to the extirpation of native fish species and the introduction of non‐native fish species. Therefore, careful assessments of fish communities should be conducted to assess possible negative interactions with freshwater mussels.

     

Assessing vulnerability of New Zealand lakes to loss of conservation value from invasive fish impacts

1. Predictions of invasion risk for seven non‐indigenous fish species, ecological impact scores for individual species, and lake conservation rankings were linked to develop Invasion Risk Impact (IRI) and Lake Vulnerability (LV) indices that help identify New Zealand lakes most at risk of loss of conservation value from potential multi‐species invasions.
2. Species‐specific IRI scores (the product of predicted invasion risk and species impact) highlighted Eurasian perch (Perca fluviatilis) and the brown bullhead (Ameiurus nebulosus), as the species most likely to spread and cause ecological harm in lakes. For 3431 lakes >1 ha throughout New Zealand, total IRI tended to be highest for lowland riverine and dune lakes most of which are already colonized by multiple invasive fish species.
3. The LV index indicated that lakes most at risk of loss of conservation value from invasive fish impacts were predominantly (i) in the northern half of the North Island where several uncommon lake types occur, and (ii) along the west coast of the South Island where conservation value is often greater, largely because of low catchment modification.
4. The IRI and LV indices can be used to assist with setting priorities for surveillance monitoring, advocacy, and response planning targeted at preventing the establishment of invasive fish in moderate‐to‐high value lakes most susceptible to ecological impacts. Both indices can be adapted to accommodate alternative impact and conservation scoring systems, providing a flexible tool for local‐ and national‐scale assessments of lake vulnerability to fish invasion impacts.

Copyright © 2016 John Wiley & Sons, Ltd.