Monitoring nitrogen,phosphorus and sulphur in hybrid rice (<Emphasis Type="Italic">Oryza sativa</Emphasis> L.) using hyperspectral remote sensing

Till date, the remote sensing research on crop nutrient monitoring has focused mainly on biomass and nitrogen (N) estimation and only a few attempts had been made to characterize and monitor macronutrients other than N. Field experiments were undertaken to study the remote detection of macronutrient status of rice using hyperspectral remote sensing. The variability in soil available N, phosphorus (P) and sulphur (S) and their content in plants were created using artificial fertility gradient design. The leaf and canopy hyperspectral reflectance was captured from variable macronutrient status vegetation. Linear correlation analysis between the spectral reflectance and plant nutrient status revealed significantly (p < 0.05) higher correlation coefficient at 670, 700, 730, 1090, 1260, 1460 nm for the nutrient under study. Published and proposed vegetation indices (VIs) were tested for canopy N, P and S prediction. The results of the investigation revealed that, published VIs (NDVI hyper and NDVI broadbands) could retrieve canopy N with higher accuracy, but not P and S. The predictability of the visible and short wave infrared based VI NRI₁₅₁₀ ((R₁₅₁₀ ? R₆₆₀)/(R₁₅₁₀ + R₆₆₀)) was the highest (r = 0.81, p < 0.01) for predicting N. Based on the outcomes of linear correlation analysis new VIs were proposed for remote detection of P and S. Proposed VI P_670_1260 ((R₁₂₆₀ ? R₆₇₀)/(R₁₂₆₀ + R₆₇₀)) retrieved canopy P status with higher prediction accuracy (r = 0.67, p < 0.01), whereas significantly higher canopy S prediction (r = 0.58, p < 0.01) was obtained using VI S_670_1090 ((R₁₀₉₀ ? R₆₇₀)/(R₁₀₉₀ + R₆₇₀)). The proposed spectral algorithms could be used for real time and site-specific N, P and S management in rice. Nutrient specific wavelengths, identified in the present investigation, could be used for developing relatively low-cost sensors of hand-held instruments to monitor N, P and S status of rice plant.     

Application of day and night digital photographs for estimating maize biophysical characteristics

In this study, an inexpensive camera-observation system called the Crop Phenology Recording System (CPRS), which consists of a standard digital color camera (RGB cam) and a modified near-infrared (NIR) digital camera (NIR cam), was applied to estimate green leaf area index (LAI), total LAI, green leaf biomass and total dry biomass of stalks and leaves of maize. The CPRS was installed for the 2009 growing season over a rainfed maize field at the University of Nebraska-Lincoln Agricultural Research and Development Center near Mead, NE, USA. The vegetation indices called Visible Atmospherically Resistant Index (VARI) and two green–red–blue (2g–r–b) were calculated from day-time RGB images taken by the standard commercially-available camera. The other vegetation index called Night-time Relative Brightness Index in NIR (NRBI_NIR) was calculated from night-time flash NIR images taken by the modified digital camera on which a NIR band-pass filter was attached. Sampling inspections were conducted to measure bio-physical parameters of maize in the same experimental field. The vegetation indices were compared with the biophysical parameters for a whole growing season. The VARI was found to accurately estimate green LAI (R² = 0.99) and green leaf biomass (R² = 0.98), as well as track seasonal changes in maize green vegetation fraction. The 2g–r–b was able to accurately estimate total LAI (R² = 0.97). The NRBI_NIR showed the highest accuracy in estimation of the total dry biomass weight of the stalks and leaves (R² = 0.99). The results show that the camera-observation system has potential for the remote assessment of maize biophysical parameters at low cost.     

RGB and multispectral UAV image fusion for Gramineae weed detection in rice fields

In this paper, a new method to fuse low resolution multispectral and high resolution RGB images is introduced, in order to detect Gramineae weed in rice fields with plants at 50 days after emergence (DAE).The images are taken from a fixed-wing unmanned aerial vehicle (UAV) at 60 and 70 m altitude. The proposed method combines the texture information given by a high resolution red–green–blue (RGB) image and the reflectance information given by a low resolution multispectral (MS) image, to obtain a fused RGB-MS image with better weed discrimination features. After analyzing the normalized difference vegetation index (NDVI) and normalized green red difference index (NGRDI) for weed detection, it was found that NGRDI presents better features. The fusion method consists of decomposing the RGB image using the intensity, hue and saturation (IHS) transformation, then, a second order Haar wavelet transformation is applied to the intensity layer (I) and the NGRDI image. From this transformation, the low–low (LL) coefficients of the NGRDI image are replaced by the LL coefficients of the I layer. Finally, the fused image is obtained by transforming the new wavelet coefficients to RGB space. To test the method, a one hectare experimental plot with rice plants at 50 DAE with Gramineae weeds was selected. Additionally, to compare the performance of the method, two indices were used, specifically, the M/M_GT index which is the percentage of detected weed area, and the MP index which indicates the precision of weed detection. These indices were evaluated in four validation zones using three Neural Networks (NN) detection systems based on three types of images; namely, RGB, RGB + NGRDI, and fused RGB-NGRDI. The best weed detection performance was obtained by the NN with the fused image, with M/M_GT index between 80 and 108% and MP between 70 and 85%.     

Estimation of rice protein content before harvest using ground-based hyperspectral imaging and region of interest analysis

Protein content, which represents rice taste quality, must be estimated in order to create a harvesting plan as well as next year’s basal dressing fertilizer application plan. Ground-based hyperspectral imaging with high resolution (1 × 1 mm per pixel) was used for estimating the protein content of brown rice before harvest. This paper compares the estimation accuracy of rice protein content estimation models generated from the mean reflectances of five regions of interest (ROIs): the overall target area, dark area (less illuminated parts of the rice plants), canopy area (leaves, yellow leaves, and ears), leaf area, and ear and yellow leaf area. The size of the target sampling area was 0.85 × 0.85 m. An R + G + B histogram and a GNDVI–NDVI image were used to separate the target area into the individual ROIs. The values of the coefficient of determination R ² and the root mean square error of prediction (RMSE) were similar for each model: R ² ranged from 0.83 to 0.86 and RMSE ranged from 0.27 to 0.30% for all models except for the dark area model, where R ² = 0.76 and RMSE = 0.35%. There were no significant differences in the magnitude of the estimation error among all models. This result indicates that it is not necessary to obtain an image with a ground resolution that is greater than 0.85 × 0.85 m per pixel to estimate rice protein content before harvest. This result should provide useful information when deciding the altitude of platforms for imaging rice fields.     

Estimation of bioenergy crop yield and N status by hyperspectral canopy reflectance and partial least square regression

The objective of this study was to compare performance of partial least square regression (PLSR) and best narrowband normalize nitrogen vegetation index (NNVI) linear regression models for predicting N concentration and best narrowband normalize different vegetation index (NDVI) for end of season biomass yield in bioenergy crop production systems. Canopy hyperspectral data was collected using an ASD FieldSpec FR spectroradiometer (350–2500 nm) at monthly intervals in 2012 and 2013. The cropping systems evaluated in the study were perennial grass {mixed grass [50 % switchgrass (Panicum virgatum L.), 25 % Indian grass “Cheyenne” (Sorghastrum nutans (L.) Nash) and 25 % big bluestem “Kaw” (Andropogon gerardii Vitman)] and switchgrass “Alamo”} and high biomass sorghum “Blade 5200” (Sorghum bicolor (L.) Moench) grown under variable N applications rates to estimate biomass yield and quality. The NNVI was computed with the wavebands pair of 400 and 510 nm for the high biomass sorghum and 1500 and 2260 nm for the perennial grass that were strongly correlated to N concentration for both years. Wavebands used in computing best narrowband NDVI were highly variable, but the wavebands from the red edge region (710–740 nm) provided the best correlation. Narrowband NDVI was weakly correlated with final biomass yield of perennial grass (r² = 0.30 and RMSE = 1.6 Mg ha^?1 in 2012 and r² = 0.37 and RMSE = 4.0 Mg ha^?1, but was strongly correlated for the high biomass sorghum in 2013 (r² = 0.72 and RMSE = 4.6 Mg ha^?1). Compared to the best narrowband VI, the RMSE of the PLSR model was 19–41 % lower for estimating N concentration and 4.2–100 % lower for final biomass. These results indicates that PLSR might be best for predicting the final biomass yield using spectral sample obtained in June to July, but narrowband NNVI was more robust and useful in predicting N concentration.     

Improved remote sensing detection of wheat powdery mildew using dual-green vegetation indices

In this study, we investigated the possibility of using ground-based remote sensing technology to estimate powdery mildew disease severity in winter wheat. Using artificially inoculated fields, potted plants, and disease nursery tests, we measured the powdery mildew canopy spectra of varieties of wheat at different levels of incidence and growth stages to investigate the disease severity. The results showed that the powdery mildew sensitive bands were between 580 and 710 nm. The best two-band vegetation index that correlated with wheat powdery mildew between 400 and 1000 nm wavelength were the normalized spectrum 570–590 and 536–566 nm bands for the ratio index, and 568–592 and 528–570 nm for the normalized difference index. The coefficients of determination (R ²) for both were almost the same. The optimum dual-green vegetation index was constructed based on a calculation of the ratio and normalized difference between the normalized spectrum within the two green bands. The coefficients of determination (R ²) of DGSR (584, 550) (dual-green simple ratio) and DGND (584, 550) (dual-green normalized difference) were both 0.845. The inverse models of disease severity performed well in the test process at the canopy scale, and indicated that, compared with the traditional vegetation indices of Lwidth, mND705, ND (SDr, SDb), SIPI, and GNDVI, the novel dual-green indices greatly improved the remote sensing detection of wheat powdery mildew disease. Following these results, combined disease severity and canopy spectra were shown to be of enormous value when applied to the accurate monitoring, prevention, and control of crop diseases.     

Prediction of yield and the contribution of legumes in legume-grass mixtures using field spectrometry

Productivity and botanical composition of legume-grass swards in rotation systems are important factors for successful arable farming in both organic and conventional farming systems. As these attributes vary considerably within a field, a non-destructive method of detection while doing other tasks would facilitate more targeted management of crops and nutrients in the soil–plant–animal system. Two pot experiments were conducted to examine the potential of field spectroscopy to assess total biomass and the proportions of legume, using binary mixtures and pure swards of grass and legumes. The spectral reflectance of swards was measured under artificial light conditions at a sward age ranging from 21 to 70 days. Total biomass was determined by modified partial least squares (MPLS) regression, stepwise multiple linear regression (SMLR) and the vegetation indices (VIs) simple ratio (SR), normalized difference vegetation index (NDVI), enhanced vegetation index (EVI) and red edge position (REP). Modified partial least squares and SMLR gave the largest R ² values ranging from 0.85 to 0.99. Total biomass prediction by VIs resulted in R ² values of 0.87–0.90 for swards with large leaf to stem ratios; the greatest accuracy was for EVI. For more mature and open swards VI-based detection of biomass was not possible. The contribution of legumes to the sward could be determined at a constant biomass level by the VIs, but this was not possible when the level of biomass varied.     

Mapping wheat nitrogen uptake from RapidEye vegetation indices

Mapping wheat nitrogen (N) uptake at 5 m spatial resolution could provide growers with new insights regarding nitrogen-use efficiency at the field scale. This study explored the use of spectral information from high resolution (5 × 5 m) RapidEye satellite data at peak leaf area index (LAI) to estimate end-of-season cumulative N uptake of wheat (Triticum spp.) in a heterogeneous, rainfed system. The primary objectives were to evaluate the usefulness of simple, widely used vegetation indices (VIs) from RapidEye as a tool to map crop N uptake over three growing seasons, farms and growing conditions, and to examine the usefulness of remotely sensed N uptake maps for precision agriculture applications. Data on harvested wheat N was collected at twelve plots over three seasons at four farms in the Palouse region of Northern Idaho and Eastern Washington. Seventeen commonly used spectral VIs were computed for images collected during ‘peak greenness’ (maximum LAI) to determine which VIs would be most appropriate for estimating wheat N uptake at harvest. The normalized difference red-edge index was the top performing VI, explaining 81 % of the variance in wheat N uptake with a regression slope of 1.06 and RMSE of 15.94 kg/ha. Model performance was strong across all farms over all three seasons regardless of crop variety, allowing the creation of high accuracy wheat N uptake maps. In conclusion, for this particular agro-ecosystem, mid-season VIs that incorporate the use of the NIR and red-edge bands are generally better predictors of end-of-season crop N uptake than VIs that do not include these bands, thereby further enabling their use in precision agriculture applications.     

Evaluating hyperspectral vegetation indices for estimating nitrogen concentration of winter wheat at different growth stages

Many hyperspectral vegetation indices (VIs) have been developed to estimate crop nitrogen (N) status at leaf and canopy levels. However, most of these indices have not been evaluated for estimating plant N concentration (PNC) of winter wheat (Triticum aestivum L.) at different growth stages using a common on-farm dataset. The objective of this study was to evaluate published VIs for estimating PNC of winter wheat in the North China Plain for different growth stages and years using data from both N experiments and farmers’ fields, and to identify alternative promising hyperspectral VIs through a thorough evaluation of all possible two band combinations in the range of 350–1075 nm. Three field experiments involving different winter wheat cultivars and 4–6 N rates were conducted with cooperative farmers from 2005 to 2007 in Shandong Province, China. Data from 69 farmers’ fields were also collected to evaluate further the published and newly identified hyperspectral VIs. The results indicated that best performing published and newly identified VIs could explain 51% (R₇₀₀/R₆₇₀) and 57% (R₄₁₈/R₄₀₅), respectively, of the variation in PNC at later growth stages (Feekes 8–10), but only 22% (modified chlorophyll absorption ratio index, MCARI) and 43% (R₇₆₃/R₇₆₁), respectively, at the early stages (Feekes 4–7). Red edge and near infrared (NIR) bands were more effective for PNC estimation at Feekes 4–7, but visible bands, especially ultraviolet, violet and blue bands, were more sensitive at Feekes 8–10. Across site-years, cultivars and growth stages, the combination of R₃₇₀ and R₄₀₀ as either simple ratio or a normalized difference index performed most consistently in both experimental (R ² = 0.58) and farmers’ fields (R ² = 0.51). We conclude that growth stage has a significant influence on the performance of different vegetation indices and the selection of sensitive wavelengths for PNC estimation, and new approaches need to be developed for monitoring N status at early growth stages.     

Improving in-season estimation of rice yield potential and responsiveness to topdressing nitrogen application with Crop Circle active crop canopy sensor

In-season site-specific nitrogen (N) management is a promising strategy to improve crop N use efficiency and reduce risks of environmental contamination. To successfully implement such precision management strategies, it is important to accurately estimate yield potential without additional topdressing N application (YP₀) as well as precisely assess the responsiveness to additional N application (RI) during the growing season. Previous research has mainly used normalized difference vegetation index (NDVI) or ratio vegetation index (RVI) obtained from GreenSeeker active crop canopy sensor with two fixed bands in red and near-infrared (NIR) spectrums to estimate these two parameters. The development of three-band Crop Circle active sensor provides a potential to improve in-season estimation of YP₀ and RI. The objectives of this study were twofold: (1) identify important vegetation indices obtained from Crop Circle ACS-470 sensor for estimating rice YP₀ and RI; and (2) evaluate their potential improvements over GreenSeeker NDVI and RVI. Four site-years of field N rate experiments were conducted in 2012 and 2013 at the Jiansanjiang Experiment Station of China Agricultural University located in Northeast China. The GreenSeeker and Crop Circle ACS-470 active canopy sensor with green, red edge, and NIR bands were used to collect rice canopy reflectance data at different key growth stages. The results indicated that both the GreenSeeker (best R² = 0.66 and 0.70, respectively) and Crop Circle (best R² = 0.71 and 0.77, respectively) sensors worked well for estimating YP₀ and RI at the stem elongation stage. At the booting stage, Crop Circle red edge optimized soil adjusted vegetation index (REOSAVI, R² = 0.82) and green ratio vegetation index (R² = 0.73) explained 26 and 22 % more variability in YP₀ and RI, respectively, than GreenSeeker NDVI or RVI. At the heading stage, the GreenSeeker sensor indices became saturated and consequently could not be used for YP₀ or RI estimation, while Crop Circle REOSAVI and normalized green index could still explain more than 70 % of YP₀ and RI variability. It is concluded that both sensors performed similarly at the stem elongation stage, but significantly better results were obtained by the Crop Circle sensor at the booting and heading stages. Furthermore, the results revealed that Crop Circle green band-based vegetation indices performed well for RI estimation while the red edge-based vegetation indices were the best for estimating YP₀ at later growth stages.     

Evaluating the performance of xanthophyll,chlorophyll and structure-sensitive spectral indices to detect water stress in five fruit tree species

This study assessed the capability of several xanthophyll, chlorophyll and structure-sensitive spectral indices to detect water stress in a commercial farm consisting of five fruit tree crop species with contrasting phenology and canopy architecture. Plots irrigated and non-irrigated for eight days of each species were used to promote a range of plant water status. Multi-spectral and thermal images were acquired from an unmanned aerial system while concomitant measurements of stomatal conductance (g_s), stem water potential (Ψ_s) and photosynthesis were taken. The Normalized Difference Vegetation Index (NDVI), red-edge ratio (R₇₀₀/R₆₇₀), Transformed Chlorophyll Absorption in Reflectance Index normalized by the Optimized Soil Adjusted Vegetation Index (TCARI/OSAVI), the Photochemical Reflectance Index using reflectance at 530 (PRI) and 515 nm [PRI_(570–515)] and the normalized PRI (PRI_norm) were obtained from the narrow-band multi-spectral images and the relationship with the in-field measurements explored. Results showed that within the Prunus species, Ψ_s yielded the best correlations with PRI and PRI_(570–515) (r² = 0.53) in almond trees, with TCARI/OSAVI (r² = 0.88) in apricot trees and with PRI_norm, R₇₀₀/R₆₇₀ and NDVI (r² from 0.72 to 0.88) in peach trees. Weak or no correlations were found for the Citrus species due to the low level of water stress reached by the trees. Results from the sensitivity analysis pointed out the canopy temperature (T_c) and PRI_(570–515) as the first and second most sensitive indicators to the imposed water conditions in all the crops with the exception of apricot trees, in which Ψ_s was the most sensitive indicator at midday. PRI_norm was the least sensitive index among all the water stress indicators studied. When all the crops were analyzed together, PRI_(570–515) and NDVI were the indices that better correlations yielded with Crop Water Stress Index, g_s and, particularly, Ψ_s (r² = 0.61 and 0.65, respectively). This work demonstrated the feasibility of using narrow-band multispectral-derived indices to retrieve water status for a variety of crop species with contrasting phenology and canopy architecture.     

Developing a new Crop Circle active canopy sensor-based precision nitrogen management strategy for winter wheat in North China Plain

Active canopy sensor (ACS)—based precision nitrogen (N) management (PNM) is a promising strategy to improve crop N use efficiency (NUE). The GreenSeeker (GS) sensor with two fixed bands has been applied to improve winter wheat (Triticum aestivum L.) N management in North China Plain (NCP). The Crop Circle (CC) ACS-470 active sensor is user configurable with three wavebands. The objective of this study was to develop a CC ACS-470 sensor-based PNM strategy for winter wheat in NCP and compare it with GS sensor-based N management strategy, soil N_min test-based in-season N management strategy and conventional farmer’s practice. Four site-years of field N rate experiments were conducted from 2009 to 2013 to identify optimum CC vegetation indices for estimating early season winter wheat plant N uptake (PNU) and grain yield in Quzhou Experiment Station of China Agricultural University located in Hebei province of NCP. Another nine on-farm experiments were conducted at three different villages in Quzhou County in 2012/2013 to evaluate the performance of the developed N management strategy. The results indicated that the CC ACS-470 sensor could significantly improve estimation of early season PNU (R² = 0.78) and grain yield (R² = 0.62) of winter wheat over GS sensor (R² = 0.60 and 0.33, respectively). All three in-season N management strategies achieved similar grain yield as compared with farmer’s practice. The three PNM strategies all significantly reduced N application rates and increased N partial factor productivity (PFP) by an average of 61–67 %. It is concluded that the CC sensor can improve estimation of early season winter wheat PNU and grain yield as compared to the GS sensor, but the PNM strategies based on these two sensors perform equally well for improving winter wheat NUE in NCP. More studies are needed to further develop and evaluate these active sensor-based PNM strategies under more diverse on-farm conditions.     

Phenotyping a diversity panel of quinoa using UAV-retrieved leaf area index,SPAD-based chlorophyll and a random forest approach

Given its high nutritional value and capacity to grow in harsh environments, quinoa has significant potential to address a range of food security concerns. Monitoring the development of phenotypic traits during field trials can provide insights into the varieties best suited to specific environmental conditions and management strategies. Unmanned aerial vehicles (UAVs) provide a promising means for phenotyping and offer the potential for new insights into relative plant performance. During a field trial exploring 141 quinoa accessions, a UAV-based multispectral camera was deployed to retrieve leaf area index (LAI) and SPAD-based chlorophyll across 378 control and 378 saline-irrigated plots using a random forest regression approach based on both individual spectral bands and 25 different vegetation indices (VIs) derived from the multispectral imagery. Results show that most VIs had stronger correlation with the LAI and SPAD-based chlorophyll measurements than individual bands. VIs including the red-edge band had high importance in SPAD-based chlorophyll predictions, while VIs including the near infrared band (but not the red-edge band) improved LAI prediction models. When applied to individual treatments (i.e. control or saline), the models trained using all data (i.e. both control and saline data) achieved high mapping accuracies for LAI (R²?=?0.977–0.980, RMSE?=?0.119–0.167) and SPAD-based chlorophyll (R²?=?0.983–0.986, RMSE?=?2.535–2.861). Overall, the study demonstrated that UAV-based remote sensing is not only useful for retrieving important phenotypic traits of quinoa, but that machine learning models trained on all available measurements can provide robust predictions for abiotic stress experiments.

     

Methodology for measuring fAPAR in crops using a combination of active optical and linear irradiance sensors: a case study in Triticale (X Triticosecale Wittmack)

The amount of photosynthetically active radiation (PAR, 0.4–0.7 μm) absorbed by plants for photosynthesis relative to incident radiation is defined as the fraction of absorbed photosynthetically active radiation (fAPAR). This is an important variable in both plant biomass production and plant growth modeling. This study investigates the application of a newly developed, linear irradiance sensor (LightScout Quantum Bar Sensor, LightScout, Spectrum Technologies, Inc. USA), to quantify fAPAR for a demonstrator crop, Triticale (X Triticosecale Wittmack). A protocol was devised for sensor placement to determine reflected PAR components of fAPAR and to determine the optimal time of day and sensor orientation for data collection. Coincident, top of canopy, normalized difference vegetation index (NDVI) measurements were also acquired with a CropCircle? ACS-210 sensor and measurements correlated with derived fAPAR values. The optimum height of the linear irradiance sensor above soil or plant canopy was found to be 0.4 m while measuring reflected PAR. Measurement of fAPAR was found to be stable when conducted within 1 h of local solar noon in order to avoid significant bidirectional effects resulting from diurnal changes of leaf orientation relative to the vertically-placed sensor. In the row crop studied, averaging fAPAR readings derived from the linear irradiance sensor orientated across and along the plant row provided an R² = 0.81 correlation with above-canopy NDVI. Across row sensor orientation also gave a similar correlation of R² = 0.76 allowing the user to reduce sampling time.     

Evaluation of red and red-edge reflectance-based vegetation indices for rice biomass and grain yield prediction models in paddy fields

Remote sensing-based nitrogen (N) management has been evaluated in many crops. The water background and wide range of varieties in rice (Oryza sativa), are unique features that require additional consideration when using sensor technology. The commonly calculated normalized difference vegetation index is of limited use when the crop has reached complete canopy closure. The objective of this research was to evaluate mid-season agronomic parameter and grain yield prediction models along with the effect of water background and of different varieties using a red- and red-edge-based vegetation index. Varieties × N trials were established at the LSU AgCenter Rice Research Station located in Crowley, Louisiana in 2011 and 2012. Canopy spectral reflectance under clear and turbid water, biomass yield, N content, plant coverage, and water depth were collected each week for three consecutive weeks beginning 2 weeks before panicle differentiation. Grain yield was also determined. Water turbidity had an influence on spectral reflectance when canopy coverage was less than 50 %. While water depth influenced red reflectance, this was not carried over when reflectance was transformed to vegetation indices. The red-edge-based vegetation indices, especially those computed by ratio, had stronger relationships with measured agronomic parameters as compared with red-based indices. Furthermore, the effect of variety on the yield prediction model was observed using derivative-based red-edge indices but not with other ratio-based indices. Future researches should focus on developing a generalized yield prediction model using ratio-based red-edge indices across different varieties to extend its applicability in production fields.     

Sampling of subterranean termites <Emphasis Type="Italic">Syntermes</Emphasis> spp. (Isoptera: Termitidae) in a eucalyptus plantation using point process and geostatistics

The Syntermes genus, the most significant termite pest in eucalyptus cultivation, damages roots and debarks plant rings. This can kill the seedlings of this plant, and thus require replanting. Integrated management, based on sampling plans can reduce damage to eucalyptus seedlings and allows the rational use of chemical control. The objectives were to model the spatial distribution of the Syntermes spp. foraging holes using the Matérn-cluster point process in the Cerrado region (Brazilian savannah), simulate a sampling plan for termite hole density, produce maps of foraging hole densities using geostatistics and validate the simulated sampling plan in the field. The distribution of the Syntermes spp. foraging holes was spatially non-homogeneous and it adjusted to the Matérn-cluster point process model in the Minas Gerais Cerrado areas. The best Syntermes sampling plan simulation in the area of Cerrado is to launch a circular 5 m radius parcel every 100 m (sampling error <5 %) in a systematic manner. The approach of point processes, combined with geostatistics, is adequate to produce maps for the termite Syntermes spp. infestation in the eucalyptus plantation.     

Hyperspectral discrimination of foliar biotic damages in rice using principal component analysis and probabilistic neural network

Assessment of crop health status in real time could provide reliable and useful information for making effective and efficient management decisions regarding the appropriate time and method to control crop diseases and insect damage. In this study, hyperspectral reflectance of symptomatic and asymptomatic rice leaves infected by Pyricularia grisea Sacc, Bipolaris oryzae Shoem, Aphelenchoides besseyi Christie and Cnaphalocrocis medinalis Guen was measured in a laboratory within the 350–2?500 nm spectral region. Principal component analysis was performed to obtain the principal component spectra (PCs) of different transformations of the original spectra, including original (R), common logarithm of reciprocal (lg (1/R)), and the first derivative of original and common logarithm of reciprocal spectra (R′ and (lg (1/R))′). A probabilistic neural network classifier was applied to discriminate the symptomatic rice leaves from asymptomatic ones with the front PCs. For identifying symptomatic and asymptomatic rice leaves, the mean overall discrimination accuracies for R, lg (1/R), R′ and (lg (1/R))′ were 91.3, 93.1, 92.3 and 92%, and the mean Kappa coefficients were 0.771, 0.835, 0.829 and 0.82, respectively. To discriminate between disease and insect damage, the overall accuracies for R, lg (1/R), R′ and (lg (1/R))′ were 97.7, 98.1, 100 and 100%, and the Kappa coefficients were 0.962, 0.97, 1 and 1, respectively. These results demonstrated that hyperspectral remote sensing can discriminate between multiple diseases and the insect damage of rice leaves under laboratory conditions.     

Estimation of the rootzone depth above a gravel layer (in wild blueberry fields) using electromagnetic induction method

Wild blueberry (Vaccinium angustifolium Ait.) fields in the north east Canada are naturally grown in a course textured thin layer of soil and below this layer is a soilless layer of gravel. The root zone depth of this crop varies from 10 to 15 cm. Investigating the depth to the gravel layer below the course textured soil is advantageous, as it affects the water holding capacity of the root zone. Water and nutrient management are the two primary determinants of crop yield and the amount of leaching. The objective of this study was to estimate the depth to the gravel layer using DualEM-2 instrument. A C++ program written in Visual Studio 2010 was used to develop mathematical models for estimating the depth to the gravel layer from the outputs of DualEM-2 sensor. Two wild blueberry fields were selected in central Nova Scotia, Canada to evaluate the performance of DualEM-2 instrument in estimating the rootzone depth above the gravel layer. The mid points of squares created by grid lines were used as the sampling points at each experimental site. The actual depth to the interface was measured manually at selected grid points (n = 50). The apparent ground conductivity (EC_a) values of DualEM-2 were recorded and the depth to the interface was estimated for the same sampling points within the selected fields. The fruit yield samples were also collected from the same grid points to identify the impact of the depth to the gravel layer on crop yield. After calibrations, comprehensive surveys were conducted and the actual and estimated depths to the interface were established. The interpolated maps of fruit yield, and the actual (z_in) and estimated (\( {\text{z}}_{\text{in}}^{*} \)) depths to the interface were created in ArcGIS 10 software. Results indicated that the z_in was significantly correlated with \( {\text{z}}_{\text{in}}^{*} \) for the North River (R ² = 0.73; RMSE = 0.27 m) and the Carmel (R ² = 0.45; RMSE = 0.20 m) sites. Results revealed that the areas with shallow depth to the gravel layer were low yielding, indicating that the variation in the depth to the gravel layer can have an impact on crop productivity. Non-destructive estimations of the depth to the gravel layer can be used to develop erosion control strategies, which will result in an increased crop production.     

Crop height variability detection in a single field by multi-temporal terrestrial laser scanning

Information on crop height, crop growth and biomass distribution is important for crop management and environmental modelling. For the determination of these parameters, terrestrial laser scanning in combination with real-time kinematic GPS (RTK–GPS) measurements was conducted in a multi-temporal approach in two consecutive years within a single field. Therefore, a time-of-flight laser scanner was mounted on a tripod. For georeferencing of the point clouds, all eight to nine positions of the laser scanner and several reflective targets were measured by RTK–GPS. The surveys were carried out three to four times during the growing periods of 2008 (sugar-beet) and 2009 (mainly winter barley). Crop surface models were established for every survey date with a horizontal resolution of 1 m, which can be used to derive maps of plant height and plant growth. The detected crop heights were consistent with observations from panoramic images and manual measurements (R² = 0.53, RMSE = 0.1 m). Topographic and soil parameters were used for statistical analysis of the detected variability of crop height and significant correlations were found. Regression analysis (R² < 0.31) emphasized the uncertainty of basic relations between the selected parameters and crop height variability within one field. Likewise, these patterns compared with the normalized difference vegetation index (NDVI) derived from satellite imagery show only minor significant correlations (r < 0.44).