QTL analysis of deep-sowing tolerance during seed germination in the maize IBM Syn4 RIL population

In arid or semi-arid regions, deep-sowing is an effective treasure to ensure seeds absorbing water from deep soil layer at present. However, the existing maize varieties have poor tolerance to deep-sowing, which is attributed to that few genes are explored and utilised. In this study, 243 IBM Syn4 recombinant inbred lines (RIL) constructed with B73 and Mo17 as parents and 1,339 DNA markers evenly distributed in 10 chromosomes, were used for QTL analysis of deep-sowing tolerance during seed germination. There were significant differences in germination-related traits between the parental lines at 12.5 cm sowing depth. Among them, 7, 7, 5, 10 and 2 QTLs for emergence rate, seedling length, plumule length, mesocotyl length and coleoptile length were detected, respectively. These QTLs explained 2.75% to 10.49% of the phenotypic variance with LOD scores ranging from 2.50 to 8.27. In addition, 12 overlapping QTLs formed five QTL clusters on chromosomes 3, 5, 7 and 9. This study provides a basis for molecular marker-assisted breeding and functional study in deep-sowing germination of maize.     

Integrated “omics” approaches to sustain global productivity of major grain legumes under heat stress

Grain legumes serve as key sources of dietary protein to the global human population. Consequence of high‐temperature (HT) stress is increasingly evident as drastically lost production of different crops including grain legumes worldwide, thus putting the global food security under great threat. In a changing climate scenario, cool season‐adapted grain legumes frequently encounter heat stress (HS) during their reproductive phase, thus witnessing serious yield losses. To combat the emerging challenges of HT stress, an integrated approach demanding collaborative efforts from various disciplines of plant science should be in place. This review summarizes major impacts of HT stress on grain legume, and captures the relevance of crop genetic resources to HS tolerance in these crops. Measurement of physiological traits assumes key place in view of ever‐increasing precision of next‐generation phenotyping assays. We also discuss the significance of genetic inheritance and QTL discovery and evolving “omics” science for developing HS tolerance grain legume crops.     

PEG模拟干旱胁迫下玉米胚芽鞘长与其抗旱性的关系分析

以6份抗旱性不同的玉米自交系为试材,用不同浓度的PEG-6000(polyethylene glycol,PEG)渗透溶液进行模拟干旱胁迫处理,分析玉米萌芽期中胚轴长、胚芽鞘长及苗长的变化,并将其与田间干旱胁迫处理下相应玉米自交系产量及产量相关性状的抗旱指数进行相关分析,以期揭示萌芽期玉米幼苗相关性状与其抗旱性的关系。结果表明:(1)萌芽期随着PEG浓度增加,玉米自交系胚芽鞘长、中胚轴长及苗长都呈下降趋势,其中苗长降低幅度最大,平均降幅为14%,中胚轴长次之,平均降幅为11%;(2)方差分析表明,不同玉米自交系幼苗的中胚轴长、胚芽鞘长在自交系间及PEG浓度间差异极显著,苗长在PEG浓度间差异极显著;(3)花期田间干旱胁迫下,各玉米自交系的千粒重、穗粒数及产量较正常灌溉明显下降,且其平均降幅分别为8%、14%、13%;(4)通过玉米田间产量及产量相关性状抗旱指数与萌芽期各性状相关性分析表明,中胚轴长与千粒重、穗粒数及产量的抗旱指数呈显著或极显著正相关。胚芽鞘长与千粒重、穗粒数及产量的抗旱指数呈极显著正相关,而在5%的PEG-6000渗透溶液模拟干旱胁迫下,胚芽鞘长与千粒重抗旱指数相关系数最高为0.832。因此,胚芽鞘较长的自交系其抗旱性较强,胚芽鞘长度可作为玉米早期抗旱性筛选的重要指标。     

Improved Cold and Drought Tolerance of Doubled Haploid Maize Plants Selected for Resistance to Prooxidant tert‐Butyl Hydroperoxide

To improve the abiotic stress tolerance of maize (Zea mays L.), doubled haploid (DH) plants were produced by in vitro selection of microspores exposed to tert‐butyl hydroperoxide (t‐BuOOH) as a powerful prooxidant This study investigated the tolerance of the progenies of t‐BuOOH‐selected DH lines to oxidative stress, cold and drought in controlled environment pot experiments by analyses of photosynthetic electron transport and CO₂ assimilation processes, chlorophyll bleaching and lipid peroxidation of leaves. Our results demonstrated that the t‐BuOOH‐selected DH plants exhibited enhanced tolerance not only to oxidative stress‐induced by t‐BuOOH but also to cold and drought stresses. In addition, they showed elevated activities of antioxidant enzymes such as superoxide dismutase, ascorbate peroxidase, catalase, glutathione reductase and glutathione S‐transferase when compared with the DH lines derived from microspores that were not exposed to t‐BuOOH and to the original hybrid plants. The results suggest that the simultaneous up‐regulation of several antioxidant enzymes may contribute to the oxidative and cold stress tolerance of the t‐BuOOH‐selected DH lines, and that the in vitro microspore selection represents a potential way to improve abiotic stress tolerance in maize.     

Importance of heat shock proteins in maize

Abiotic and biotic stress conditions cause extensive losses to maize production, mainly due to protein dysfunction in these conditions. In higher plants, the occurrence of heat-shock proteins (HSPs) in response to different environmental stresses is a universal phenomenon and has been well documented. Many studies have demonstrated that most HSPs are involved in many regulatory pathways, act as molecular chaperones for other cell proteins, and have strong cytoprotective effects. Although many functional roles for HSPs are known, the mechanisms for these multiple functions are not entirely understood. Here we reviewed the correlation among HSP genes/proteins and plant tolerance, especially maize, in different environmental stresses. Due to the low availability of information regarding the expression of HSP genes in response to different stresses in maize, we decided to mine databases in order to generate new insights related to this topic.     

Integrated breeding approaches for improving drought and heat adaptation in chickpea (Cicer arietinum L.)

Chickpea (Cicer arietinum L.) is a dry season food legume largely grown on residual soil moisture after the rainy season. The crop often experiences moisture stress towards end of the crop season (terminal drought). The crop may also face heat stress at the reproductive stage if sowing is delayed. The breeding approaches for improving adaptation to these stresses include the development of varieties with early maturity and enhanced abiotic stress tolerance. Several varieties with improved drought tolerance have been developed by selecting for grain yield under moisture stress conditions. Similarly, selection for pod set in the crop subjected to heat stress during reproductive stage has helped in the development of heat‐tolerant varieties. A genomic region, called QTL‐hotspot, controlling several drought tolerance‐related traits has been introgressed into several popular cultivars using marker‐assisted backcrossing (MABC), and introgression lines giving significantly higher yield than the popular cultivars have been identified. Multiparent advanced generation intercross (MAGIC) approach has been found promising in enhancing genetic recombination and developing lines with enhanced tolerance to terminal drought and heat stresses.     

In vitro screening and field evaluation of tissue-culture-regenerated sorghum (Sorghum bicolor (L.) Moench) for soil stress tolerance

Summary Sorghum bicolor (L.) Moench is generally quite sensitive to salt and acid (high aluminium) soil stresses, but quite tolerant of drought stress. As with any stress phenomenon, intra-specific variability exists within the genus. In vitro cell selection and somaclonal variation offer an alternative to traditional breeding methodology for generating improved breeding lines for hybrid development. A field selection protocol was developed for the three soil stresses and inter-stress evaluations were conducted in an effort to find multiple, stress-tolerant genotypes. The acid soil-drought stress, super-tolerant selections were located by the R₇ generation when exposed to a combined aluminium-drought stress field environment and when the regeneration population (number of regenerated lines from one callus source) was maintained at 15,000 plants or higher. A variant frequency of 0.1 to 0.2% for stress tolerance and acceptable agronomic traits among the surviving somaclones, provided an adequate number of phenotypes with desirable agronomic characteristics and a high level of soil stress tolerance. Subsequent research verified that the stress-tolerant regenerants had superior acid soil and drought stress tolerance to that of the donor parents, that their yield capabilities under stress were superior to their parents, and that their stress tolerance attributes were transferred in hybrid combinations. In vitro selection was not effective in increasing the number of field stress survivors. In fact, superior germplasms were developed from non-stressed callus or salt-stressed callus. In vitro selection reduced regeneration frequency and subsequent survival of plants under field stress. In vitro-stressed regenerants should be subjected only to non-stressed environments to maintain population numbers for field selection and thereafter should be subjected to stress environments during later (R₅₊) generations. The optimal strategy for the exploitation of somaclonal variation may be through short-term cell culture (< 12 months) with no attempt at in vitro selection.     

Characterization of drought stress environments for upland rice and maize in central Brazil

Drought stresses arise when the combination of rainfall and soil water supply are insufficient to meet the transpiration needs of the crop. In the Cerrado region of Goiás state, Brazil, summer rainfall is typically greater than 1000 mm. However, drought stress can occur during rain-free periods of only 1–3 weeks, since roots are frequently restricted to shallow depths due to Al-induced acidity in deeper soil layers. If these droughts are frequent, then plant breeding programs need to consider how to develop suitable germplasm for the target population of environments (TPE). A crop simulation model was used to determine patterns of drought stress for 12 locations and >30 environments (6 years × 5–6 planting dates) for short and medium duration rice crops (planted in early summer), and for maize grown either as a 1st or 2nd crop in the summer cycle. Regression analysis of the simulations confirmed the greater yield impact in both crops of drought stress (quantified as the ratio of water-limited to potential transpiration) when it occurred around the time of flowering and early grain-filling. For rice, mild mid-season droughts occurred 40–60% of the time in virgin (0.4 m deep for rice or 0.5 m for maize) soils and improved (0.8 m for rice or 1.0 m for maize) soils, with a yield reduction of <30%. More severe reproductive and grain-filling stress (yield reductions of 50% for rice to 90% for maize) occurred less frequently in rice (<30% of time) and 1st maize crop (< 10% of time). The 2nd maize crop experienced the greatest proportion (75–90%) of drought stresses that reduced yield to <50% of potential, with most of these occasions associated with later planting. The rice breeding station (CNPAF) experiences the same pattern of different drought types as for the TPE, and is largely suitable for early-stage selection of adapted germplasm based on yield potential. However, selection for virgin soil types could be augmented by evaluation on some less-improved soils in the slightly drier parts of the TPE region. Similarly, the drought patterns at the maize research station (CNPMS) and the other maize screening locations are better suited to selection of lines for the improved soil types. Development of lines for the 2nd crop and on more virgin (acidic) soils would require more targeted selection at late planting dates in drier sites.     

Variation in sweet potato for tolerance to some physical and biological stresses

Summary Sweet potato cultivars, breeding lines and unselected seedling clones were grown under 9 stress conditions in field and greenhouse; heavy soil, space competition, competition with maize, shading, flooding, drought, acidity, salinity, and weevil infestation. High root yield was considered to be a sign of stress tolerance. Stresses were shown to reduce the growth of shoots and roots, except flooding, which increased fibrous root production. The percentge of plants showing high stress tolerance varied from 0.35 to 30.90 for the different stress situations. Tolerances to stresses tended to occur together, as shown by low but significant correlations, significant chi-squares for numbers of plants with multiple stresses, and by low but significant correlations between yield and multiple stresses. Root flooding, space and fertility competition, and soil acidity appear to be the stress factors most closely related to production in heavy soils. Yet the magnitude of the correlations suggest that other factors or random variation also affect yield, and thus the predictive value of greenhouse stress test is presently limited.     

玉米胁迫诱导表达基因ZmSNAC1的功能分析

NAC转录因子是具有多种生物功能的植物特异转录调控因子,在植物生长发育、器官建成、激素调节和抵抗逆境等方面发挥着重要的作用。我们之前分离得到1个受干旱、盐、冷等非生物逆境胁迫和植物激素ABA诱导显著上调表达的玉米NAC家族成员ZmSNAC1,过表达转基因株系在苗期的耐脱水能力较野生型株系明显提高。在此基础上,本研究进一步对ZmSNAC1过表达转基因株系在植株生殖生长发育时期的抗旱性和耐盐性进行功能鉴定。结果表明,在干旱胁迫条件下,野生型株系相比转基因株系较存活率提高50%~52%,相对电导率降低17%~21%,叶绿素含量提高36%~47%,脯氨酸含量提高了17%~23%;在300mmol L^-1 NaCl胁迫条件下,转基因株系的存活率提高36~40%。ZmSNAC1可能作为一个正向调控因子在逆境胁迫信号转导过程中发挥重要作用。     

The effect of drought stress on the leaf relative water content and tuber yield of a half-sib family of ‘Katahdin’-derived potato cultivars

Drought tolerance in plants is a complex trait involving morphological, physiological, and biochemical mechanisms. Hundreds of genes underlie the response of plants to the stress. For crops, selecting cultivars that can produce economically significant yields under drought is a priority. Potato (Solanum tuberosum L.) is considered as drought sensitive crop, although cultivar-dependent differences in tolerance have been described. Cultivar ‘Katahdin’ possesses many appropriate characteristics and is widely used for breeding purposes worldwide; it also has enhanced tolerance to drought stress. In this study, we evaluated cv. ‘Katahdin’ and a half-sib family of 17 Katahdin-derived cultivars for leaf relative water content (RWC) and tuber yield under drought stress. The yields of cultivars ‘Wauseon’, ‘Katahdin’, ‘Magura’, ‘Calrose’, and ‘Cayuga’ did not significantly decline under drought stress. Among these five, Wauseon exhibited the lowest reduction in both tuber yield and relative water content under water shortage. The data showed that ‘Wauseon’ is the most attractive cultivar for studies of molecular and physiological processes under drought and for potato breeding due to low yield losses that correspond with high RWC values. This cultivar can serve as a reservoir of potentially useful genes to develop cultivars with enhanced tolerance to this abiotic stress.     

The effect of spot blotch and heat stress on variation of canopy temperature depression,chlorophyll fluorescence and chlorophyll content of hexaploid wheat genotypes

Spot blotch, caused by Cochliobolus sativus (Ito and Kurib.) Drechsler ex Dastur, and heat stress are two important stresses of bread wheat (Triticum aestivum L.) causing substantial yield reduction in the warm areas of South Asia. These two stresses put pressure on at least 25 million hectares of wheat areas worldwide. This study was conducted to examine variation in physiological traits and its association with heat and spot blotch. Eleven diverse bread wheat genotypes were evaluated in replicated field trials under spot blotch epidemics and heat stress conditions in 2006 and 2007 at Rampur, Nepal. Canopy temperature depression (CTD), chlorophyll fluorescence (CF), chlorophyll content, percent disease leaf area, yield and yield components were recorded. Heat and spot blotch individually reduced CTD, CF, chlorophyll content, grain yield (GRY), and thousand kernel weight (TKW), with greater reductions recorded under combined stress. Genotypes showing lower GRY or TKW loss due to spot blotch also exhibited lower yield loss due to heat stress or combined heat and disease stress, suggesting an association between tolerance mechanisms to the stresses. The physiological traits chlorophyll content, CF and CTD showed higher correlations with GRY and TKW than with area under disease progress curve (AUDPC) suggesting their potential application in screening for heat and spot blotch tolerant genotypes. Genotypes with lower disease showed the highest values for chlorophyll content, CF and CTD. Our findings provide new information on the relationship of these physiological traits with spot blotch resistance and heat tolerance when examined in the same study. The physiological traits studied have potential application in integrative indirect selection criteria for improving spot botch and heat tolerance in wheat.     

四川盆地及盆周山区玉米地方种质耐低磷胁迫研究

以来自四川盆地及盆周山区的22个玉米地方种质为材料,在低磷胁迫下对苗期缺磷症状,成株期株高、穗行数、百粒重、行粒数以及穗粒重等性状表现进行了研究。结果表明,低磷胁迫对玉米的主要农艺、经济性状均有不同程度的影响,其中对苗期缺磷症状及成株期穗粒重的影响最大,且不同玉米地方种质在苗期和成株期对低磷胁迫的反应不同,以苗期缺磷症状和成株期穗粒重的耐低磷胁迫系数的平均值作为耐低磷综合指数,能较好地反映玉米地方种质的耐低磷胁迫能力。将耐低磷综合指数按最短距离法进行聚类,可将22个玉米地方种质划分为三类。其中,第一类材料包括:汉源红包谷、汉源白包谷、汶川二白、江北大板牙,占鉴定总数的18.2%,它们的耐低磷综合指数在0.81以上,属于对低磷胁迫不敏感基因型;第二类材料包括南充秋子等4个玉米地方种质,占鉴定总数的18.2%,它们的耐低磷综合指数在0.73~0.77之间,属于对低磷胁迫反应中间型;第三类材料包括小金金皇后等14个地方种质,占鉴定总数的63.6%,它们的耐低磷综合指数在0.73以下,属于对低磷胁迫敏感基因型。     

Developmental expression of glutathione-S-transferase in maize and its possible connection with herbicide tolerance

Summary Crop improvement for tolerance to specific herbicides is an important breeding target, since molecules performing well with regard to environmental safety are frequently not completely selective for crops. The glutathione (GSH)/glutathione-S-transferase (GST) system is a general mechanism of detoxification that in higher plants may confer tolerance to some herbicides. GSH level and GST activity were measured in different maize inbred lines, in the absence or in the presence of EPTC (a thiocarbamate) and of Alachlor (a chloroacetanilide); a wide genetic variability was observed for these parameters, which appear to be involved in plant tolerance to herbicides. Isozyme analysis was performed on roots, leaves, scutellum, pollen, coleoptile, mesocotyl of the same inbreds: it revealed the presence of many GST forms in maize, showing high polymorphism; they are controlled by at least five genes, the expression of which is developmentally regulated in the different tissues analyzed.     

Breeding methods and selection indices for improved tolerance to biotic and abiotic stresses in cool season food legumes

The objective of breeding for stress tolerance is to improve productivity for a target level of stress. If tolerance is viewed as resistance to change in productivity with increasing stress, productivity under stress depends not only on stress tolerance, but also on maximum productivity. Index selection theory indicates that selection in non-stress environments will be more effective than direct selection for productivity under stress whenever the correlation between the two types of environments exceeds the heritability of productivity under stress. With high genetic correlation, selection should be conducted within a level of stress that maximizes heritability. In cases where heritability under non-stress is much higher than under stress, an index combining data from stress and non-stress environments is expected to be more efficient than selection based on evaluation only within stress environments.Secondary traits will be useful in breeding for productivity under stress whenever they have high heritability and high genetic correlation with productivity under stress. For some abiotic stresses and many biotic stresses, heritability will be highest in the presence of stress and indirect or index selection will be of limited value.     

Mass selection for improved cold and density tolerance of two maize populations

Summary Data of planting and plant density are two cultural practices influencing grain yield of maize (Zea mays L.). Our study was designed to evaluate the usefulness of a mass selection scheme to improve cold and density tolerance of the BS2 and BS3 maize populations. Populations were planted at an early planting date and a high plant density, and three cycles of mass selection for well-filled ears on erect plants were conducted at earch of three Corn Belt locations (i.e., Waseca, MN; Ames, IA; Portageville, MO).Results showed that selection improved cold tolerance traits of BS3, but not of BS2. Mass selection did not increase density tolerance of either population at any location. Selection did not improve response to planting dates, although the early planting date did improve agronomic performance and grain yield of all entries. We concluded that mass selection at high plant densities and early planting dates at diverse geographical locations did not produce cycles adapted to specific environmental conditions.     

Advances in “omics” approaches to tackle drought stress in grain legumes

Grain legumes being affordable sources of proteins, vitamins and essential micronutrients are key to human nutrition worldwide. However, frequent drought episodes present serious threat to grain legume production worldwide. Advances in legume omics in concert with evolving phenotyping and breeding techniques hold great promise to improve drought response of these crops. These resources could underpin prebreeding efforts to expedite discovery and deployment of novel drought tolerance traits into elite backgrounds. Fast-track transfer of traits that confer drought tolerance using marker technologies has been demonstrated in grain legumes like chickpea. However, complex genetic architecture of drought tolerance demands embracing more efficient tools like genomic selection (GS) for accelerated trait improvement. Recent studies on GS for addressing complex traits like drought tolerance have yielded encouraging results in these crops. Recently, speed breeding (SB) protocols have also been optimized for the improvement of long-day/day-neutral grain legumes. Efficacy of SB protocols with regard to complex traits awaits further evidences though. There remains immense scope for integrating SB with GS and gene editing to deliver drought-tolerant cultivars.     

Response of cotton genotypes to water and heat stress: from field to genes

Cotton is a crop of tropical and subtropical regions but the seed cotton yield is highly influenced by abiotic stresses like drought and heat. Response of cotton genome to abiotic stresses is highly complex and involve many genes. A comprehensive study, involving cotton genotypes developed through conventional and synthetic tetraploid method, was designed to (i) study the introgression of heat and water stress tolerance by using wild relatives (ii) evaluate genetic markers for marker assisted selection against water and heat stress. Two separate experiments for water and heat stress tolerance with a common control were established. Treatments in each experiment include a control and a stress treatment. Heat stress was applied by sowing crop two month earlier than the control treatment, whereas water stress was imposed by withholding alternate irrigation. Analyses of variance depicted highly significant (P ≤ 0.01) effect of genotypes and both stresses on boll retention, boll weight and seed cotton yield. Interaction of genotypes with stress in both experiments was also highly significant (P ≤ 0.01). Genotypes derived from interspecific crosses performed consistently in stress conditions compared to control which prove it a reliable method to introgress stress related genes from wild parents. Four genes reported for water stress tolerance and five genes reported for heat stress tolerance were evaluated by field results for efficient marker assisted selection (MAS). Results verified drought stress genes but heat stress genes could not explain genetic variability caused by heat stress. It is concluded from the results that separate genes may be responsible for heat stress tolerance for vegetative and reproductive stages, therefore, selection criteria should include both the traits.