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1.
《土壤通报》2019,(6):1400-1408
研究将生物炭(40000 kg hm~(-2))和不同用量的尿素(0, 150, 300, 450 kg hm~(-2))施用于酸性红壤中,连续种植四季作物后采集菜地土壤样品,通过定量PCR方法测定添加硝化抑制剂后土壤氨氧化微生物数量和土壤氨氧化潜势的变化,并分析氨氧化古菌(AOA)和氨氧化细菌(AOB)对土壤氨氧化潜势的相对贡献,深入探讨生物炭和氮肥添加对菜地土壤氨氧化微生物和氨氧化潜势的影响。结果表明,与未添加生物炭相比,添加生物炭处理土壤容重降低了7.1%~11.5%,pH值提高了0.20~0.56个单位,有机质含量增加了13.5%~19.1%;与未施氮肥处理相比,无机氮的含量增加了38.5%~77.8%(未添加生物炭)和17.1%~59.5%(添加生物炭)。添加生物炭和氮肥处理AOA的基因拷贝数没有显著差异(P 0.05),氮肥添加提高了AOB的基因拷贝数147.5%~385.6%(未添加生物炭)和69.5%~514.0%(添加生物炭)。添加生物炭处理,随氮肥施用量的增加,氨氧化潜势降低了13.4%~20.7%。因此,本研究中氮肥添加使AOB的amoA基因拷贝数显著增加、氨氧化潜势显著下降,对AOA没有显著影响(P 0.05);AOA对氨氧化潜势起到了主导作用;生物炭和尿素添加通过改变土壤的无机氮含量、pH、有机质含量影响土壤氨氧化过程。  相似文献   

2.
红壤稻田不同生育期土壤氨氧化微生物群落结构   总被引:2,自引:0,他引:2  
宋亚娜  林智敏 《土壤学报》2010,47(5):987-994
以福建省红壤稻田土壤为对象,通过提取土壤总DNA,利用特异引物进行PCR(聚合酶链反应)扩增和DGGE(变性梯度凝胶电泳)并结合DNA克隆测序,研究了水稻生长过程中稻田土壤氨氧化细菌和氨氧化古菌群落结构的变化。结果显示:稻田土壤具有丰富的氨氧化细菌和氨氧化古菌资源。水稻生长过程中土壤氨氧化细菌群落组成较为稳定,只表现出水稻生长前期(苗期、分蘖期)和中后期(孕穗期、成熟期)间存在一定差异。而土壤氨氧化古菌群落组成变化较大,在水稻生长的苗期、分蘖期、孕穗期和成熟期4个时期间均存在一定差异。在水稻生长过程中,土壤氨氧化细菌群落多样性指数无显著性变化,但氨氧化古菌群落多样性指数随水稻生长明显提高,孕穗期后才达到平稳。水稻生长前期土壤硝化势也具有显著上升趋势,孕穗期时达到最高,而后有所下降。土壤硝化势与氨氧化古菌群落多样性指数具有显著正相关性,与氨氧化细菌没有相关性。研究表明,氨氧化古菌对红壤稻田土壤硝化作用的影响程度较大,证实了氨氧化微生物尤其是氨氧化古菌在稻田土壤微生物组成及其生态系统功能中的重要性。  相似文献   

3.
施肥与覆膜等农田管理措施能够改变土壤的物理化学性质,这直接影响着驱动氨氧化过程的氨氧化微生物,而氨氧化过程是硝化作用的限速步骤。以沈阳农业大学棕壤长期施肥与覆膜试验站为平台,采用荧光定量PCR技术,研究了5种施肥制度下[不施肥(CK)、氮肥(N)、氮磷肥(NP)、有机肥(M)和有机无机配施(MNP)]土壤细菌、泉古菌和氨氧化微生物数量的变化。结果表明,不同施肥处理细菌、泉古菌、氨氧化细菌和氨氧化古菌的基因拷贝数平均值分别为0.52×109~4.20×109、2.14×108~9.69×108、0.21×107~6.89×107和0.26×107~74.70×107copies g-1干土。与CK相比,有机肥处理(M、MNP)能显著增加土壤细菌的丰度,化肥处理(N、NP)则相反;施肥尤其是化肥处理(N、NP)均能降低泉古菌和氨氧化古菌的丰度;有机肥处理(M、MNP)显著增加了氨氧化细菌的丰度。细菌、泉古菌、氨氧化细菌和氨氧化古菌丰度均与pH值存在显著正相关关系(P0.05),细菌和氨氧化细菌丰度则主要受全碳含量的影响,而细菌、泉古菌和氨氧化细菌丰度与铵态氮、硝态氮含量存在极显著负相关关系(P0.01)。研究结果可为进一步探讨农田生态系统中氨氧化微生物对不同管理措施的响应机制及其在氮素转化中的作用提供科学依据。  相似文献   

4.
为了研究长期不同施肥措施对中性紫色土氨氧化微生物及其硝化作用的影响,以国家紫色土肥力与肥料效益监测基地的中性紫色土为研究对象,进行土壤氨氧化细菌和氨氧化古菌amo A基因的Real-time PCR分析,比较长期不同定位施肥对土壤氨氧化潜势和硝化强度的影响,并分析不同施肥制度对功能微生物丰度与功能的作用。数据显示,土壤中氨氧化古菌amo A基因拷贝数(Log值6.21~7.14)远大于氨氧化细菌(Log值3.65~5.73),相对于对氨氧化细菌丰度的影响,施肥对土壤氨氧化古菌丰度影响较小。施用氮肥与磷肥都显著提高了土壤氨氧化细菌丰度,1.5NPK+M处理氨氧化细菌丰度最高(Log值5.73),有机无机肥配施可以显著提高土壤氨氧化微生物丰度;而含氯化肥的施用在一定程度上降低了土壤氨氧化细菌丰度与硝化细菌生长,与施用不含氯的肥料处理相比,含氯肥料处理的土壤氨氧化细菌丰度与硝化细菌数分别降低了3.74%和88.12%。研究表明,长期施肥能影响中性紫色土中氨氧化细菌的丰度,有机无机肥配施能够提高土壤的氨氧化潜力与土壤的硝化能力。  相似文献   

5.
将氨氧化成亚硝态氮的氨氧化过程是土壤硝化作用的关键步骤,主要由氨氧化细菌(ammonia-oxidizing bacteria,AOB)和氨氧化古菌(ammonia-oxidizing archaea,AOA)驱动。其中,AOA具有丰度高、硝化能力强及特殊生态环境偏好等特征,在土壤生态系统的氮素转化过程中发挥重要作用。AOA基因组序列中氨单加氧酶基因(amo A)的发现、纯培养物的分离及其不同生境的赋存状况,为土壤古菌的氨氧化研究提供了新思路。近年研究表明,氨氧化微生物的代谢类型多为化能自养型,而复杂土壤环境中的AOA,其代谢类型呈多样化,除营化能自养生长外,还可能营化能异养和混合营养代谢。其不同代谢方式在氨氧化过程中的响应机制仍需进一步研究。本文概述了土壤中AOA的发现与分布,重点介绍了其可能的代谢途径,并探究其在环境中发挥重要作用的机理。  相似文献   

6.
稻田土壤厌氧氨氧化菌群落结构对长期不同施肥的响应   总被引:2,自引:0,他引:2  
研究长期不同施肥稻田土壤厌氧氨氧化微生物丰度和群落结构组成,深入认识稻田厌氧氨氧化菌对不同施肥的响应机理,可为合理施肥和理解湿地生态系统厌氧氨氧化过程提供科学依据。设置不施肥(CK)、单施无机肥(NPK)、无机肥配施牛粪(NPKM)、无机肥加秸秆还田(NPKS)四个处理,采用荧光定量PCR和高通量测序对不同施肥模式下水稻土厌氧氨氧化细菌丰度和群落结构进行分析。结果发现,不同处理之间厌氧氨氧化细菌丰度具有显著差异(p0.05),表现为NPKMNPKSNPKCK,且与有机质、全氮和铵态氮含量具有显著相关性(p0.05)。高通量测序结果表明,不同施肥处理主要的厌氧氨氧化菌为Candidatus Brocadia、Candidatus Anammoxoglobus和Candidatus Scalindua,其中优势种群为Candidatus Brocadia。菌群的多样性分析表明,CK和NPKS处理的厌氧氨氧化菌群落结构多样性香农指数(Shannon index)、辛普森指数(Simpson index)和丰富度指数(Chao 1 index)显著高于NPKM和NPK处理(p0.05)。上述结果表明,长期施肥改变了厌氧氨氧化菌的数量和群落结构。有机无机肥配施更有利于提高厌氧氨氧化菌丰度。然而,不同施肥措施对厌氧氨氧化菌的多样性影响不同,无机肥加秸秆还田提高了厌氧氨氧化菌多样性,但单施无机肥和无机肥配牛粪降低了厌氧氨氧化菌多样性。厌氧氨氧化菌的数量和群落结构对不同施肥的响应不同。  相似文献   

7.
为探明脱硫废弃物改良盐渍化土壤对微生物群落的影响效果,在2009~2010年,采用田间试验,施用不同量的脱硫废弃物(0、0.74、1.49、2.25、3.00 kg·m-2),研究了脱硫废弃物对盐渍化土壤细菌、氨氧化细菌和氨氧化古菌的影响。试验结果表明:0~20 cm土层,Ca2+和NO-3-N含量随着施用量增加而增加;土壤p H值、电导率值显著下降。实时荧光定量PCR(q PCR)分析结果表明,微生物丰度随着脱硫废弃物的施用发生变化,但这种变化并不与脱硫废弃物的施用量呈线性关系。在0~20 cm土壤层,施脱硫废弃物使得细菌16S rRNA基因拷贝数处理组显著高于对照组。氨氧化古菌与氨氧化细菌基因拷贝数在T2和T4处理高于其它处理。20~40 cm土层各处理间微生物群落没有显著变化,或没有出现规律的变化趋势。因此,脱硫废弃物增加了土壤细菌和氨氧化功能基因丰度,且对上层土壤影响更为显著。本研究中施用脱硫废弃物1.49 kg·m-2(T2)是引起细菌和氨氧化功能基因丰度增加的施用量。  相似文献   

8.
利用原位微宇宙试验将丛枝菌根(Arbuscular mycorrhiza,AM)真菌菌丝与根系区分,设置菌根室(RA)和菌丝室(AH)两个分室处理,以粗放经营(extensive management,EM)毛竹林为对照,研究集约经营(Intensive management,IM)条件下毛竹林土壤丛枝菌根共生体对氨氧化微生物群落的影响及其响应机理。结果表明,无论集约经营还是粗放经营AH处理土壤pH均显著降低,且集约经营毛竹林AH处理土壤碱解氮显著降低;不同分室处理对硝化势没有显著影响,但集约经营毛竹林RA处理土壤硝化势显著高于粗放经营;集约经营之后氨氧化古菌(Ammonia-oxidizing archaea,AOA)基因丰度显著降低,而氨氧化细菌(Ammonia-oxidizing bacteria,AOB)基因丰度则在两种经营强度的AH处理中显著降低。不同经营强度和分室处理并未对氨氧化微生物群落组成结构产生显著影响,但网络分析显示集约经营毛竹林氨氧化微生物之间的互作和共生关系优于粗放经营,粗放经营毛竹林氨氧化微生物之间的竞争更为激烈。研究结果为更好地理解毛竹林AM真菌与氨氧化微生物之间的互作关系提供了理论基础。  相似文献   

9.
本研究通过提取土壤总DNA,利用特异引物进行PCR扩增和变性梯度凝胶电泳(DGGE),研究了不同品种水稻对稻田土壤氨氧化细菌和氨氧化古菌群落结构组成的影响.结果显示:稻田土壤具有丰富的氨氧化细菌和氨氧化古菌,且氨氧化古菌种类更多;不同品种水稻氨氧化细菌群落结构组成差异较大,其中以"天A/Km71"、"闽优1027"和"Km62/1027"3个品种相似性较高,且明显不同于其余3个品种:而氨氧化古菌群落结构组成在不同土层间表现出较大差异,其中以"天A/Km71"和"Km62/1027"的表土与根际土氨氧化古菌群落组成差异最大.研究表明不同水稻品种及土壤层次对氨氧化微生物群落结构组成具有一定影响,证明氨氧化微生物尤其是氨氧化古菌在稻田土壤生态系统中占有重要地位.  相似文献   

10.
长期施肥对氨氧化古菌丰度及群落结构的影响   总被引:1,自引:1,他引:0  
【目的】氨氧化古菌对土壤氮素转化有着重要的作用。本研究以长期定位施肥黄泥田土壤为研究对象探讨了长期不同施肥模式对土壤氨氧化古菌数量和多样性的影响,为制定合理的施肥制度提供理论基础。【方法】试验在福建省农科院试验站上进行,以30年长期定位施肥的红壤性水稻土为研究对象采用荧光定量PCR和克隆文库技术,研究了长期不同施肥模式对氨氧化古菌(ammonia-oxidizing archaea,AOA)丰度及群落结构的影响。试验设4个处理:1)不施肥(CK);2)单施氮磷钾肥(NPK);3)氮磷钾肥配施牛粪(NPKM);4)氮磷钾肥配施秸秆(NPKS)。小区面积为12 m~2每个处理设3个重复。土样采集时间为2012年10月份(水稻收获后),测定土壤养分和氨氧化古菌的数量及多样性。【结果】1)与CK相比,NPKM和NPKS处理显著增加了土壤有机质含量,NPKM和NPKS处理之间无显著差异。2)与CK相比施肥均能提高土壤全氮含量;NPKM和NPKS处理能够显著提高土壤全磷含量,NPKM处理全磷含量最高;仅NPKS处理能显著增加全钾含量。3)与CK相比,长期施肥均能提高土壤有效氮(AN)、速效磷(AP)和速效钾(AK)的含量,并且NPKM处理AN和AP含量最高,NPKS处理中AK含量最高。4)与CK相比,长期施肥均对土壤pH值无显著影响。5)与CK处理相比,NPKM和NPKS处理的amoA基因拷贝数显著增加增加幅度分别为168.4%和95.7%;单施化肥处理与CK无显著差异。土壤氨氧化古菌数量与土壤有机质含量呈显著正相关,与土壤全磷、有效氮、速效磷和速效钾含量呈极显著正相关。6)长期不同施肥处理影响土壤氨氧化古菌的种群结构,单施化肥增加了土壤AOA的多样性,而化肥配施有机肥则降低了AOA的多样性。7)本试验中得到的土壤氨氧化古菌amoA基因序列均为不可培养的古菌,包括泉古菌(Crenarchaeote)和奇古菌(Thaumarchaeote)。本试验所得氨氧化古菌绝大多数与来自土壤、沉积物的amoA基因克隆非常相似,少数与水体环境相似。【结论】不同培肥模式下,土壤中氨氧化古菌均为不可培养的古菌,包括泉古菌(Crenarchaeota)和奇古菌(Thaumarchaeota),然而水稻土壤养分和氨氧化古菌丰度及群落结构变化显著。单施化肥的作用不明显,有机无机肥配施有利于土壤有机质和养分的积累以及氨氧化古菌的生长增加了氨氧化古菌优势菌群的比例。  相似文献   

11.
The objective of this study was to examine the relationship between soil water potential, nitrifier community structure and nitrification activity in semiarid soils. Soils were collected after a 5-month dry period (end of summer) and subsequently rewetted to specific water potentials and incubated for 7 days prior to analysis of nitrification activity and nitrifier community structure. The approach used in this study targeted a 491bp segment of the amoA gene which encodes the active site of the ammonia monooxygenase enzyme, which is the key enzyme for all aerobic ammonia oxidisers. amoA serves as a useful target for environmental studies since it is both specific and universal for all ammonia oxidisers and reflects the phylogeny of the ammonia oxidisers. Our results suggest that in semiarid soils water potential plays a key role in determining the structure of ammonia oxidising bacteria (AOB), and that additionally AOB community structure is correlated to potential nitrification rate in these soils.  相似文献   

12.
硝化/脲酶抑制剂在农业中的应用   总被引:34,自引:3,他引:31  
硝化/脲酶抑制剂对于解决氮肥,特别是尿素及含尿素肥料施用带来的问题已经显示其效果和很好的应用前景。大量的实验室和田间实验表明,与传统肥料相比,添加硝化/脲酶抑制剂的肥料对尿素氮的转化、氨的挥发、土壤中的硝化、反硝化作用以及作物产量、环境效益等方面起到了积极的作用。当今,在世界肥料市场已经有几十种抑制剂申请了专利,其中有四种抑制剂西吡(Nitrapyrin)、双氰胺(DCD)、n-丁基硫代磷酰三胺(NBPT)和氰醌(HQ)大量应用于农业生产。  相似文献   

13.
We present a significant relationship between the natural abundance isotopic composition of ecosystem pools and the abundance of a microbial gene. Natural abundance 15N of soils and soil DNA were analysed and compared with archaeal ammonia oxidizer abundance along an elevation gradient in northern Arizona and along a substrate age gradient in Hawai'i. There was a significant positive correlation between the abundance of archaeal amoA genes and natural abundance δ15N of total soil or DNA suggesting that ammonia oxidizing archaea play an important role in ecosystem N release.  相似文献   

14.
Summary Field studies to determine the effect of different rates of fertilization on emission of nitrous oxide (N2O) from soil fertilized with anhydrous ammonia showed that the fertilizer-induced emission of N2O-N in 116 days increased from 1.22 to 4.09 kg ha–1 as the rate of anhydrous ammonia N application was increased from 75 to 450 kg ha–1. When expressed as a percentage of the N applied, the fertilizer-induced emission of N2O-N in 116 days decreased from 1.6% to 0.9% as the rate of fertilizer N application was increased from 75 to 450 kg N ha–1. The data obtained showed that a 100% increase in the rate of application of anhydrous ammonia led to about a 60% increase in the fertilizer-induced emission of N2O.Field studies to determine the effect of depth of fertilizer injection on emission of N2O from soil fertilized with anhydrous ammonia showed that the emission of N2O-N in 156 days induced by injection of 112 kg anhydrous ammonia N ha–1 at a depth of 30 cm was 107% and 21 % greater than those induced by injection of the same amount of N at depths of 10 cm and 20 cm, respectively. The effect of depth of application of anhydrous ammonia on emission of N2O was less when this fertilizer was applied at a rate of 225 kg N ha–1.  相似文献   

15.
Summary Field studies of the effects of different N fertilizers on emission of nitrous oxide (N20) from three Iowa soils showed that the N2O emissions induced by application of 180 kg ha–1 fertilizer N as anhydrous ammonia greatly exceeded those induced by application of the same amount of fertilizer N as aqueous ammonia or urea. On average, the emission of N2O-N induced by anhydrous ammonia was more than 13 times that induced by aqueous ammonia or urea and represented 1.2% of the anhydrous ammonia N applied. Experiments with one soil showed that the N2O emission induced by anhydrous ammonia was more than 17 times that induced by the same amount of N as calcium nitrate. These findings confirm indications from previous work that anhydrous ammonia has a much greater effect on emission of N2O from soils than do other commonly used N fertilizers and merits special attention in research relating to the potential adverse climatic effect of N fertilization of soils.Laboratory studies of the effect of different amounts of NH4OH on emission of N2O from Webster soil showed that the emission of N2O-N induced by addition of 100 g NH4OH-N g–1 soil represented only 0.18% of the N applied, whereas the emissions induced by additions of 500 and 1 000 g NH4OH-N g–1 soil represented 1.15% and 1.19%, respectively, of the N applied. This suggests that the exceptionally large emissions of N2O induced by anhydrous ammonia fertilization are due, at least in part, to the fact that the customary method of applying this fertilizer by injection into soil produces highly alkaline soil zones of high ammonium-N concentration that do not occur when urea or aqueous ammonia fertilizers are broadcast and incorporated into soil.  相似文献   

16.
The effects of long-term fertilization of acidic soils on ammonia-oxidizing archaea (AOA) and bacteria (AOB) communities and its ecological implications remain poorly understood. We chose an acidic upland soil site under long-term (27-year) fertilization to investigate ammonia oxidizer communities under four different regimes: mineral N fertilizer (N), mineral NPK fertilizer (NPK), organic manure (OM) and an unfertilized control (CK). Soil net nitrification rates were significantly higher in OM soils than in CK, N or NPK soils. Quantitative analysis of the distribution of amoA genes by DNA-based stable isotope probing revealed that AOA dominate in CK, N and NPK soils, while AOB dominate in OM soils. Denaturing gradient gel electrophoresis and clone library analyses of amoA genes revealed that Group 1.1a-associated AOA (also referred to as Nitrosotalea) were the most dominant active AOA population (>92%), while Nitrosospira Cluster 3 and Cluster 9 were predominant among active AOB communities. The functional diversity of active ammonia oxidizers in acidic soils is affected by long-term fertilization practices, and the responses of active ammonia oxidizers to mineral fertilizer and organic manure are clearly different. Our results provide strong evidence that AOA are more highly adapted to growth at low pH and low substrate availability than AOB, and they suggest that the niche differentiation and metabolic diversity of ammonia oxidizers in acidic soils are more complex than previously thought.  相似文献   

17.
Water pulses have a significant impact on nitrogen (N) cycling, making management of N challenging in agricultural soils that are exposed to episodic rainfall. In hot, dry environments, wetting of dry soil during summer fallow causes a rapid flush of organic matter mineralisation and subsequent nitrification, which may lead to N loss via nitrous oxide emission and nitrate leaching. Here we examined the potential for the nitrification inhibitor nitrapyrin to decrease gross nitrification at elevated temperature in soils with contrasting soil organic matter contents, and the consequent effects on ammonia oxidiser populations. Soil was collected during summer fallow while dry (water content 0.01 g g−1 soil) from a research site with two management treatments (tilled soil and tilled soil with long-term additional crop residues) by three field replicates. The field dry soil (0–10 cm) was wet with or without nitrapyrin, and incubated (20 or 40 °C) at either constant soil water content or allowed to dry (to simulate summer drying after a rainfall event). Gross N transformation rates and inorganic N pools sizes were determined on six occasions during the 14 day incubation. Bacterial and archaeal amoA gene abundance was determined on days 0, 1, 7 and 14. Nitrapyrin increased ammonium retention and decreased gross nitrification rates even with soil drying at 40 °C. Nitrification was likely driven by bacterial ammonia oxidisers, as the archaeal amoA gene was below detection in the surface soil layer. Bacterial ammonia oxidiser gene abundances were not affected by nitrapyrin, despite the decrease in nitrifier activity. Increased soil organic matter from long-term additional crop residues diminished the effectiveness of nitrapyrin. The present study highlights the potential for nitrapyrin to decrease nitrification and the risk of N loss due to mineralisation of soil organic matter under summer fallow conditions.  相似文献   

18.
Factors affecting community structure and connectivity within systems are crucial for provision of microbial ecosystem-services (e.g., soil nitrogen cycling), but what these factors are and how they are affected by land-use and management is poorly understood. Biogeochemical cycles are disrupted in agricultural-systems, providing an excellent opportunity to investigate the roles of management and land-use in shaping microbial communities and ecosystem function. We investigated soil ammonia oxidisers under different cropping practices and within a nearby grassy woodland; representing a gradient of physical/chemical disturbance. Land-use and management practices resulted in significant differences in community structure. Major differences in system connectivity were observed between land-uses, but not within management practices, indicating that land-use change is the major driver of ecosystem change, rather than management within land-uses. Agricultural ammonia oxidiser communities appeared to be less well connected and rely less on biotic interactions than those in natural systems, perhaps a reflection of the extent to which natural feedback loops are disturbed in managed systems. Smaller, but significant, differences were also evident between management treatments. Despite differences in community structure and connectivity there was, however, no significant effect on potential N-cycle rates, indicating that although land-use and management impacts may drive community changes, these do not necessarily translate into changes in functional capacity.  相似文献   

19.
Soil nitrification rate is very different among soil types, as a result of differences in physical and chemical properties. Little is known about the composition of the nitrifying bacteria community. In this investigation, three soils (fluvo-aquic soil, permeable paddy soil and red earth) from different geo-ecological regions in China were characterized for their nitrification activities and their nitrifying bacteria communities determined either by molecular approaches or by conventional culture methods. A 28-day long-term soil incubation showed that the maximum nitrification potential was found in the fluvo-aquic soil with almost 100% of inorganic N present as NO3-N, while the minimum nitrification potential was in red earth with only a 4.9% conversion rate from ammonium into nitrate. There was no relationship between nitrification potential and numbers of nitrifiers in the soil. The conventional most probable number (MPN) method could enumerate ammonia oxidizers, but failed in enumerating nitrite oxidizers. Therefore, we used an MPN-PCR procedure which gave a convincing nitrite oxidizer count result, instead of MPN-diphylamine. Soils were characterized by denaturing gradient gel electrophoresis (DGGE) of DNA extracted from soils and amplified using a primer specific for the 16S rRNA gene and/or for the amoA gene. The DGGE columns of the three soils differed from each other. There were two similar bands present in DGGE columns of the fluvo-aquic and permeable paddy soils, but no similar band was found in DGGE columns of the red earth. The sequence of amoA indicated that all ammonia oxidizers in these soils were grouped into Nitrosospira clusters 1 and 3, and each soil had a common band similar to the other soils and a special band which differed from the other soils.  相似文献   

20.
This study examined the effect of water filled pore space (WFPS) on gross N fluxes and community structure and abundance of ammonia oxidizing archaea and bacteria in a semi-arid soil. Different WFPS altered the community structure of both AOA and AOB. Ammonia oxidizer communities (for both archaea and bacteria) from ‘wet’ soils (95, 85 and 75% WFPS) and ‘dry’ soils (25, 45 and 55% WFPS) were distinctly different from one another. Additionally there was a significant relationship between community structure and gross rates of nitrification. There was also a significant relationship between WFPS and bacterial amoA abundance but not archaeal amoA abundance suggesting that bacterial ammonia oxidizers are more responsive to changes in soil water availability. These results are in agreement with other studies suggesting that both groups of ammonia oxidizers have distinct physiological characteristics and ecological niches with consequences for nitrification in response to WFPS. Overall findings from this study indicate that nitrification, both in terms of process rates and populations responsible for nitrification activity, is highly responsive to soil water availability.  相似文献   

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