Bacterial Communities Responsible for the Decomposition of Rice Straw Compost in a Japanese Rice Paddy Field Estimated by DGGE Analysis of Amplified 16S rDNA and 16S rRNA Fragments

To estimate the succession and phylogenetic composition of the bacterial communities responsible for the decomposition of rice straw compost under flooded conditions during the cultivation period of paddy rice, denaturing gradient gel electrophoresis (DGGE) analyses targeting 16S rDNA and 16S rRNA, followed by sequencing were conducted in a Japanese paddy field. The DGGE bands of the bacterial communities in the rice straw compost were significantly more numerous in the DNA samples than in the RNA samples. Although the band number of the DNA samples was almost constant throughout the period, RNA samples showed fewer DGGE bands after mid-season drainage than before it. Thus, about 81% of the bacteria present in rice straw compost were considered to be metabolically "active" before mid-season drainage and about 62% after it. The changes in the DGGE patterns of bacterial DNA and RNA before and after mid-season drainage, respectively, were also revealed by cluster analysis and principal component analysis of the DGGE patterns. These results indicated that the bacterial communities of rice straw compost incorporated into flooded paddy fields changed gradually along with the decomposition, except for the period of mid-season drainage, but that they were influenced by mid-season drainage. Members of β-, γ- and δ-Proteobacteria, Cytophaga-Flavobacterium-Bacteroides (CFB) group, Chlorobia, Verrucomicrobia, Chloroflexi, Spirochaetes, Firmicutes (clostridia) and Actinobacteria were present during the decomposition of rice straw compost. Characteristic "active" bacteria among them were as follows: Clostridium, Acinetobacter (γ-Proteobacteria) and β-Proteobacteria before mid-season drainage, Flavobacterium, Chondromyces , Chlorflexi and δ-Proteobacteria after mid-season drainage, and Spirochaeta and myxobacteria throughout the period.     

Eukaryotic communities associated with the decomposition of rice straw compost in a Japanese rice paddy field estimated by DGGE analysis

To estimate the succession and phylogenetic composition of the eukaryotic communities responsible for the decomposition of rice straw compost under flooded conditions during the cultivation period of paddy rice, denaturing gradient gel electrophoresis (DGGE) analysis targeting 18S rDNA followed by sequencing was conducted in a Japanese paddy field. The eukaryotic communities in rice straw compost incorporated into the flooded paddy field were influenced by the mid-season drainage and mainly composed of fungi (Ascomycota, Zygomycota, and Chytridiomycota) and protozoa (Ciliophora, Euglyphida, and Dactylopodida), most of which existed continuously during the cultivation period of paddy rice. The results indicated that these eukaryotic members were associated with the decomposition of rice straw compost in paddy field soil directly or indirectly.     

Comparison of Bacterial Communities Associated with Microcrustaceans from the Floodwater of a Paddy Field Microcosm: Estimation Based on DGGE Pattern and Sequence Analyses

Bacterial communities associated with five kinds of microcrustaceans ( Tanycypris sp., Moina sp., Mesocyclops sp., Cypretta sp. and Heterocypris sp.) from the floodwater of a paddy field microcosm were examined by the application of denaturing gradient gel electrophoresis (DGGE) to PCR-amplified 16S rDNA products with universal bacterial primers and by sequencing of characteristic DGGE bands. The number of DGGE bands of the associated bacteria was small, indicating the association of specific bacterial members with the microcrustaceans studied, among which Tanycypris sp. showed the smallest number of bands. Principal component analysis (PCA) demonstrated that the community structure of the associated bacteria could be divided into three groups: Podocopida ( Tanycypris sp., Cypretta sp. and Heterocypris sp.), Moina sp. and Mesocyclops sp., and further analysis separated Tanycypris sp. and Heterocypris sp. into different clusters. The duration of the incubation period affected the bacteria associated with Tanycypris sp., Moina sp. and Cypretta sp. only. Nearly all of the associated bacteria belonged to Gram-negative bacteria, especially the Cytophaga-Flavobacterium-Bacteroides (CFB) group. Closest relatives of the DGGE bands common to three Podocopida and Mesocyclops sp. belonged to an invertebrate endosymbiont.     

Succession and Phylogenetic Profile of Eubacterial Communities in Rice Straw Incorporated into a Rice Field: Estimation by PCR-DGGE Analysis

PCR-DGGE analysis followed by sequencing was conducted to estimate the succession and the phylogenetic profile of the eubacterial communities responsible for the decomposition of rice straw (RS) that was incorporated into a rice field. Leaf sheath and leaf blade parts were separately put in nylon mesh bags, and were placed in the rice field soil under drained conditions during the off-cropping season and under flooded conditions after transplantation of rice. In addition, RS samples that had been placed under drained conditions in the off-cropping season were placed again in flooded rice field soil after transplantation of rice. DGGE patterns of the bacterial communities in the RS samples were classified into two groups, namely leaf sheaths and leaf blades. Principal component analysis of the DGGE patterns revealed the succession along with the duration of placement. These results indicated that the RS part (sheath or blade) mainly determined the structure of the bacterial communities responsible for the RS decomposition, followed by the duration of placement. Sequence analysis of the characteristic DGGE bands indicated that most of the closest relatives associated with the bands belonged to α-, β-, γ-, and δ-Proteobacteria, CFB group, and Spirochaetes. Some bands were closely related to Acidobacteria and Verrucomicrobia. CFB members and α-Proteobacteria predominated commonly in both RS parts, while γ- and δ-Proteobacteria, and Spirochaetes and β-Proteobacteria specifically colonized sheath and blade parts, respectively. In addition, Proteobacteria and CFB members characterized the differences in the bacterial communities under flooded or drained conditions. These results suggest that Proteobacteria, CFB group, and Spirochaetes were responsible for RS decomposition in rice field soil under both flooded and drained conditions.     

Comparison of bacterial community structures at main habitats in paddy field ecosystem based on DGGE analysis

Bacterial communities at different habitats in a Japanese paddy field ecosystem were compared to understand the bacterial world in the ecosystem as a whole by analyzing data of the denaturing gradient gel electrophoresis (DGGE) band patterns and the sequenced DGGE bands. The habitats were floodwater, percolating water, microcrustacean inhabiting in floodwater, plow layer soil, rice roots, rice straw and rice straw compost incorporated in soil, rice straw placed on the soil surface, plant residues in paddy fields, and rice straw under composting process. Phylotype (band) richness, diversity, evenness, and stability of the bacterial communities at the respective habitats were evaluated based on the DGGE profile data. Phylotype richness was greater near plant residues, rice straw buried in soil and rice straw placed on soil surface, while it was smaller at microcrustacean and rice straw compost buried in soil. The samples from plow layer soil and rice straw compost buried in soil showed considerably higher index values for diversity, evenness, and stability, while those from rice straw placed on soil surface and microcrustacean had lower values of the indices than other habitats. Sequences of totally 250 DGGE bands were assigned to phyla or classes. Distribution of bacterial members to phylogenetic taxa was different among the respective habitats. Inhabitants in plow layer soil were most widely distributed among the groups (nine phyla: Proteobacteria, Chloroflexi, Chlorobi, Verrucomicrobia, Acidobacteria, Nitrospira, candidate division OP10, Cyanobacteria, and Actinobacteria), while those in floodwater and microcrustacean were restricted to only three phyla (Proteobacteria, Bacteroidetes, and Actinobacteria). Proteobacteria and Bacteroidetes were found at all the habitats and the habitats except for plow layer soil, respectively, whereas abundant members belonged to Chloroflexi and Actinobacteria in plow layer soil. “Comprehensive mapping” of DGGE fragments was conducted by principal component analysis based on evolutionary distances of the fragments to 202 reference bacterial strains to overview phylogenetic relationships of bacterial members among the respective habitats. The score plots with the first and second principal components distinctly characterized bacterial members at the respective habitats, and the similarity between the respective communities was clearly demonstrated. Overall, bacterial communities at the respective habitats were distinct and different in the diversity and stability to each other, which may have contributed to the diversity of overall bacterial communities in the paddy field ecosystem.     

Effect of the long-term application of organic matter on soil carbon accumulation and GHG emissions from a rice paddy field in a cool-temperate region,Japan-II. Effect of different compost applications-

ABSTRACT

The influence of long-term application of different types of compost on rice grain yield, CH₄ and N₂O emissions, and soil carbon storage (0 ? 30 cm) in rice paddy fields was clarified. Two sets of paddy fields applied with rice straw compost or livestock manure compost mainly derived from cattle were used in this study. Each set comprised long-term application (LT) and corresponding control (CT) plots. The application rates for rice straw compost (42 years) and livestock manure compost (41 years in total with different application rates) were 20 Mg fresh weight ha^–1. Soil carbon storage increased by 33% and 37% with long-term application of rice straw compost and livestock manure compost, respectively. The soil carbon sequestration rate by the organic matter application was 23% higher with the livestock manure compost than with the rice straw compost. The rice grain yield in the LT plot was significantly higher than that in the corresponding CT plot with both types of compost. Although the difference was not significant in the rice straw compost, cumulative CH₄ emissions increased with long-term application of both composts. Increase rate of CH₄ emission with long-term application was higher in the livestock manure compost (99%) than that in the rice straw compost (26%). In both composts, the long-term application did not increase N₂O emission significantly. As with the rice straw compost, the increase in CH₄ emission with the long-term application of livestock manure compost exceeded the soil carbon sequestration rate, and the change in the net greenhouse gas (GHG) balance calculated by the difference between them was positive, indicating a net increase in the GHG emissions. The increase in CH₄ and net GHG emissions owing to the long-term application of the livestock manure compost could be higher than that of the rice straw compost owing to the amount of applied carbon, the quality of compost and the soil carbon accumulation. The possibility that carbon sequestration in the subsoil differs depending on the type of composts suggests the importance of including subsoil in the evaluation of soil carbon sequestration by long-term application of organic matter.     

Cyanobacterial communities of rice straw left on the soil surface of a paddy field

To estimate diversity, seasonal variation, and phylogeny of the cyanobacterial communities in rice straw placed in nylon mesh bags and left on the soil surface of a paddy field, total DNA was extracted from straw, amplified by polymerase chain reaction targeting 16S rRNA genes of cyanobacteria, and the amplicons were separated by denaturing gradient gel electrophoresis (DGGE). These DGGE bands were sequenced. The paddy field was under flooded condition after transplanting of rice (Experiment 1) and under drained conditions after harvest (Experiment 2). The residual samples on the soil surface under upland conditions were collected just before spring plowing and were placed again on the soil surface after transplanting under flooded conditions. DGGE band patterns of cyanobacterial communities of rice straw were different under drained conditions, under flooded conditions when fresh rice straw samples were placed (Experiment 1), and under flooded conditions when residual rice straw samples were replaced (Experiment 2), indicating that the communities were influenced by both water regime of the paddy field and the degree of the rice straw decomposition. Sequence analysis of DGGE bands indicated that most of the cyanobacteria in rice straw on the soil surface in the paddy field were filamentous members belonging to Subsections III and IV. Filamentous cyanobacterial cells were observed in rice straw under flooded conditions by epifluorescence microscopy.     

Bio-Efficacy of Microbial Infused Rice Straw Compost on Plant Growth Promotion and Induction of Disease Resistance in Chili

ABSTRACT

Microbial fortified organic amendment in chili cultivation may affect plant development and disease suppression. Microbial infused rice straw compost, commercial rice straw compost, and fungicide Benomyl for chili (Capsicum annum L.) cultivation and control of Sclerotium foot rot were studied under glass house condition. Chili seed cv. Kulai were sown in the Sclerotium rolfsii infested and non-infested soil. After two weeks, five healthy seedlings were transplanted into planting bags. Growth performance and development of disease symptoms associated with S. rolfsii foot rot infection were assessed. Applying microbial infused rice straw compost increased seed germination and plant growth, and suppressed development of foot rot compared to using commercial rice straw compost and the Benomyl. A higher disease reduction (84.6%) occurred with 15 Mg · ha^?1 microbial infused rice straw compost (62.7%), followed by Benomyl (53.8%), and 15 Mg · ha^?1 commercial rice straw compost (46.2%). Application of microbial infused rice straw compost at 15 Mg · ha^?1 yielded optimum seed germination and seedling establishment, plant growth, and disease suppression. Microbial infused rice straw compost is a good alternative to chemical fungicide in controlling Sclerotial disease in chili.     

Effect of the long-term application of organic matter on soil carbon accumulation and GHG emissions from a rice paddy field in a cool-temperate region,Japan. -I. Comparison of rice straw and rice straw compost -

ABSTRACT

The influence of the long-term combination of rice straw removal and rice straw compost application on methane (CH₄) and nitrous oxide (N₂O) emissions and soil carbon accumulation in rice paddy fields was clarified. In each of the initial and continuous application fields (3 and 39?51 years, respectively), three plots with different applications of organic matter were established, namely, rice straw application (RS), rice straw compost application (SC) and no application (NA) plots, and soil carbon storage (0?15 cm), rice grain yield and CH₄ and N₂O fluxes were measured for three years. The soil carbon sequestration rate by the organic matter application was higher in the SC plot than in the RS plot for both the initial and continuous application fields, and it was lower in the continuous application field than in the initial application field. The rice grain yield in the SC plot was significantly higher than those in the other plots in both the initial and continuous application fields. Cumulative CH₄ emissions followed the order of the NA plot < the SC plot < the RS plot for both the initial and continuous application fields. The effect of the organic matter application on the N₂O emissions was not clear. In both the initial and continuous application fields, the increase in CH₄ emission by the rice straw application exceeded the soil carbon sequestration rate, and the change in the net greenhouse gas (GHG) balance calculated by the difference between them was a positive, indicating a net increase in the GHG emissions. However, the change in the GHG balance by the rice straw compost application showed negative (mitigating GHG emissions) for the initial application field, whereas it showed positive for the continuous application field. Although the mitigation effect on the GHG emissions by the combination of the rice straw removal and rice straw compost application was reduced by 21% after 39 years long-term application, it is suggested that the combination treatment is a sustainable management that can mitigate GHG emissions and improve crop productivity.     

Succession and phylogenetic profile of eukaryotic communities in rice straw incorporated into a rice field: Estimation by PCR-DGGE and sequence analyses

Abstract

Succession and the phylogenetic profile of eukaryotic communities associated with rice straw decomposition in a rice field were studied using polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) analysis followed by 18S rDNA sequencing. Nylon mesh bags containing leaf sheaths or blades were buried in the plow layer of a rice field under flooded conditions after transplanting (Experiment 1) and under drained conditions during the off-crop season (Experiment 2). In addition, rice straw samples in Experiment 2 were taken out before plowing in spring and re-placed in the rice field under flooded conditions at transplanting. Statistical analyses based on DGGE patterns showed that eukaryotic communities were divided into two groups, namely group A before the placement in soil, after the mid-season drainage in Experiment 1 and under the drained conditions in Experiment 2 and group B before the mid-season drainage in Experiment 1 and under the flooded conditions in Experiment 2. Based on the sequence analysis of DGGE bands, which characterized the eukaryotic communities, succession of the communities was revealed, that is, most of the bands in group A were closely related to fungi, whereas the bands in group B were closely related to protozoa. These results indicated that eukaryotic communities associated with rice straw decomposition in the rice field are mainly affected by soil conditions, such as oxic or reduced conditions, irrespective of rice straw parts (leaf sheaths and blades).     

稻秸对土壤细菌群落分子多态性的影响

模拟稻秸原位还田条件,分别在水稻土和红壤中添加水稻秸秆培养70d ,第0、5、2 5、4 5、70天采集土样。采用非机械破壁法直接提取水稻土和红壤细菌总DNA ,水稻土细菌总DNA经过二次纯化;红壤细菌总DNA经过一次纯化后,PCR扩增其16SrDNAV3可变区,均可获得清晰的目的条带,对扩增产物进行DGGE分析,结果显示:水稻土和红壤样品的DGGE条带增加,说明稻秸能够增加土壤细菌群落分子多态性的丰富度,随着培养期的延长,施有稻秸的处理中土壤细菌群落多态性的变化远远复杂于空白对照土壤中的细菌群落变化;同时发现在稻秸刺激下不同土壤细菌群落多态性高峰期出现时间不同     

水稻秸秆堆沤肥对优质水稻产量及质量的影响

以不施肥为对照,设习惯性分阶段施用化肥、一次性施用化肥、施用一般有机肥及一次性单施不同用量的水稻秸秆堆沤肥或与不同比例化肥配施的12个处理,以水稻产量及质量为主要指标,探索以水稻秸秆堆沤肥种植优质水稻的适宜措施、规律及用量。结果表明,试验组各处理的稻谷产量及稻米垩白度、蛋白质含量、食味值存在较大差异,大小范围分别为5 560～9 460 kg/hm~2、1.57%～2.23%、8.11%～10.06%、64.56～73.24,水稻秸秆堆沤肥各处理的稻米外观、营养、蒸煮、食味等品质较好;其中50%水稻秸秆堆沤肥+25%化肥处理产量达8 705 kg/hm~2并与习惯分阶段施用化肥及施用一般有机肥处理接近,稻米垩白度1.84%、蛋白质含量8.54%,食味值最佳,其它稻米外观、蒸煮等品质亦适宜。说明水稻秸秆堆沤肥供养分能力强,并具有与化肥配施良好,提高养分利用率及肥料减量,提高稻米食味等作用,可作为优质水稻种植的重要肥源之一。     

Microbial communities responsible for the decomposition of rice straw compost in a Japanese rice paddy field determined by phospholipid fatty acid (PLFA) analysis

To identify the microbial communities responsible for the decomposition of rice straw compost in soil during the rice cultivation period, phospholipid fatty acid (PLFA) composition of rice straw compost was determined by periodically sampling the compost from a Japanese rice field under flooded conditions. About 21% of the compost was decomposed within a period of 3 months. The total amount of PLFAs, as an indicator of microbial biomass, was significantly lower under drained conditions than under flooded conditions and was relatively constant during the flooding period. This indicates that the microbial biomass in the compost samples did not increase during the gradual decomposition of rice straw compost under flooded conditions. The proportion of branched-chain PLFAs (biomarker of Grampositive and anaerobic Gram-negative bacteria) slightly decreased during the early period after placement, and increased gradually afterwards. Among the branched-chain PLFAs, i15:0, ail5:0, i16:0 and i17:0 PLFAs predominated and their proportions increased gradually except for i16:0. The proportion of straight mono-unsaturated PLFAs (biomarker of Gramnegative bacteria) was almost constant throughout the period, and 18:1ω9 and 18:1ω7 PLFAs predominated. The proportion of straight poly-unsaturated PLFAs as a biomarker of eukaryotes including fungi was also constant throughout the period, except for a decrease under drained conditions. Straight poly-unsaturated PLFAs consisted mainly of 18:2ω6c PLFA. Therefore, these results suggest that the proportions of Gram-positive and anaerobic Gram-negative bacteria increased during the decomposition of rice straw compost in flooded paddy field. Statistical analyses enabled to divide PLFA patterns of microbiota in the rice straw compost into two groups, one group consisting of rice straw compost samples collected before mid-season drainage and the other of samples collected after mid-season drainage. Small squared distances among samples in cluster analysis indicated that the community structure of microbiota was similar to each other as a whole. These results suggest that the microbial communities changed gradually during the period of placement, and that mid-season drainage may have affected the community structure of microbiota. Principal component analysis of the PLFA composition suggested that the succession of microbiota along with the decomposition in flooded soil was similar between rice straw compost and rice straw and that the changes in the community structure during the decomposition in flooded soil were more conspicuous for rice straw than for rice straw compost.     

Molecular characterization of methane-oxidizing bacteria associated with rice straw decomposition in a rice field

Abstract

Methane-oxidizing bacteria (MOB) are crucial to the reduction of CH₄ emitted to the atmosphere. However, it is unclear how MOB in rice straw are affected by straw decomposition processes. In a Japanese rice field, a year-round experiment was set up to study the effects of agricultural practice (rice cultivation/winter fallow), straw parts (leaf sheath/blade) and the site of straw placement (plow layer/soil surface) on MOB communities in rice straw using denaturing gradient gel electrophoresis (DGGE) and DNA sequencing analyses of key MOB functional genes (pmoA and amoA). Thirty-eight different DGGE bands were observed over the entire investigation period. Principal component analysis of DGGE pattern suggested that agricultural practice is the key factor regulating the MOB communities. Sequencing of dominant DGGE bands showed that: (1) during the rice cultivation period, methanotrophs (particularly type I methanotrophs) dominated the MOB community, (2) during the winter fallow season both type I and type II methanotrophs were dominant in sheath segments placed both on the soil surface and in the plow layer, whereas ammonia oxidizers seemed to dominate blade segments placed in the plow layer. Alignment of diagnostic amino acid sequences of MOB suggested the presence of novel ammonia oxidizers in rice straw in rice fields.     

Differences in the Influence of Cadmium on the Decomposition of Various Types of Organic Materials in Soil

The influence of Cd on the decomposition of various types of organic materials in soil was studied. CdCl₂ or CaCl₂ (control) was added to a Gley soil at a level of 10 mmol kg^-1 soil. Three days later, organic materials including glutamic acid, glucose, casein, starch, cellulose, lignin, rice straw, rice straw compost, or 3 kinds of sludges were mixed with the soil in a proportion of 1%, respectively. During an 8-week period of incubation at 28°C, CO₂ evolution was measured periodically. At the end of the incubation period, the form of Cd in the soil was analyzed by successive extractions with water, CaCl₂, CH₃COOH, Na₄P₂O₇, and with hot HCl after HNO₃-HClO₄ digestion.

The decomposition of all the organic materials was inhibited by the addition of Cd, but the degree of inhibition varied considerably among the types of organic materials. The decomposition of rice straw, rice straw compost, and sludges was markedly inhibited by Cd. The amount of water-soluble Cd was less in the soils treated with rice straw, rice straw compost, and sludges than in the soils treated with other types of organic materials, while the amounts of CaCI₂-extractable Cd were much larger in the latter soils. In the case of rice straw, rice straw compost, and sludges Cd was easily adsorbed from the CdCl₂ solution.

These results suggest that the inhibition of organic matter decomposition by Cd is caused by the adsorption of Cd onto organic matter.     

Bacterial communities associated with nodal roots of rice plants along with the growth stages: Estimation by PCR-DGGE and sequence analyses

Bacterial communities in rice roots that developed from different nodes and at different growth stages were compared by using polymerase chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE) analysis of 16S rDNA. Rice root samples were collected at three stages, namely tillering (July 2), maximum tillering (July 21), and ripening (September 12). The bacterial diversity in rice roots was found to increase along with the growth stages of the rice plants as well as the root age from the numbers of DGGE bands. The community structure of the bacteria was also found to change with the growth stages and root age from cluster analysis. Sequence analysis of the DGGE bands indicated that the dominant bacteria associated with rice roots were Gram-negative bacteria, especially β-Proteobacteria irrespective of the growth stages and root age. DGGE bands related to Janthinobacterium agaricidamnosum W1r3T and Clostridium sp. FCB90-3 were ubiquitous in many roots irrespective to the sampling date. Principal component analysis enabled to characterize the DGGE bands related to nitrogen-fixing Azoarcus spp., and Azovibrio sp. BS20-3 in the samples collected on July 2 and on July 21, and the myxobacteria collected on September 12, respectively, as representative bacteria in the bacterial communities. The habitat around older rice roots at every sampling date was more reductive than that around younger rice roots, and the DGGE bands related to Spirochaeta spp. were specific in older roots at every sampling date. Some specific bacteria that were most closely related to the DGGE bands were found from principal component analysis to characterize young and old. roots at each growth stage as follows: aerobes Flavobacterium sp. 90 clone 2 and Janthinobacterium agaricidamnosus W1r3T in young roots and facultative anaerobes Dechloromonas sp. MissR and Anaeromyxobacter dehalogenans 2CP-3 in old nodal roots on July 2, strict anaerobe Geobacter pelophilus Dfr2 and aerobes Nitrosospira sp. Nsp17 and uncultured Nitrospira sp. clone 4-1 in old roots on July 21, and different Clostridium spp. in both young and old roots and Desulfovibrio magneticus RS-1 in old roots on September 12, respectively. A larger number of the closest relatives of anaerobic bacteria grew at the late stage than at the early stages, and in old roots than in younger roots. Thus, the environment of paddy roots was remarkably heterogeneous as a bacterial habitat, where not only the whole root system but also a root may create oxic and anoxic environments.     

Rice Straw Composting and Its Effect on Soil Properties

In Egypt, recycling rice straw and organic wastes is of great concern as well as improvement of soil properties. Rice straw compost could improve both organic waste recycling and soil quality. The aim of this study was to evaluate the effect of the rice straw compost, with or without water treatment residuals (WTR), on soil chemical properties and dry weight of canola. The results showed that the addition of rice straw compost and WTR decreased soil salinity and increased Ca⁺², K⁺ and organic matter. The addition of compost and WTR (2:1 wet weight ratio) at level of 10 g dry weight kg^?1 dry soil gave the best reduction in soil salinity compared to compost or WTR only or for level 10 g dry weight kg^?1 dry soil. The results also showed that the available P decreased with the application of WTR while it increased with the application of compost. The study demonstrated that the dry weight and relative increase (R.I %) of dry weight of canola plants increased with the application of WTR and compost to soil. Combinations of WTR and compost to soils had a greater effect on increasing yield and improved the efficiency of WTR on soil properties.     

Changes in the pH,EC, available P,SOC and TN stocks in a single rice paddy after long-term application of inorganic fertilizers and organic matters in a cold temperate region of Japan

Purpose

The objective of this study was to determine the changes in the main soil chemical properties including pH, electrical conductivity (EC), available phosphorus (P), soil organic carbon (SOC) and total nitrogen (TN) stocks after long-term (31 years) additions of two types of organic matters—rice straw and rice straw compost, combined with NPK fertilizers in single rice paddy in a cold temperate region of Japan.

Materials and methods

A long-term experiment on combined inorganic fertilizers and organic matters in paddy rice cultivation began in May 1982 in Yamagata, northeastern Japan. After the 31st harvest, soil samples were collected from five treatments [(1) PK, (2) NPK, (3) NPK + 6 Mg ha^?1 rice straw (RS), (4) NPK + 10 Mg ha^?1 rice straw compost (CM1), and (5) NPK + 30 Mg ha^?1 rice straw compost (CM3)] at five soil depths (0–5, 5–10, 10–15, 15–20, and 20–25 cm). Soil chemical properties of pH, EC, available P, SOC, and TN were analyzed.

Results and discussion

The pH decreased significantly only at the higher compost rate of 30 Mg ha^?1, while EC increased in all the organic matter treatments. Available P significantly increased in the CM1 and CM3 treatments by 55.1 and 86.4 %. The amounts of SOC stock increased by 67.2, 21.4, and 8.6 %, and soil TN stock by 64.1, 20.2, and 8.5 % in CM3, RS, and CM1, respectively, compared to NPK treatment.

Conclusions

Significant changes in soil properties were observed after 31 years of organic matter applications with reference to PK- and NPK-fertilized rice paddy soils. A significant decrease in pH was observed with the application of a high rate (30 Mg ha^?1) of rice straw compost but not with the conventional rate of 10 Mg ha^?1. However, EC increased significantly relative to that of the PK- and NPK-fertilized plots in all the organic matter treatments. Available P significantly increased in the CM1 and CM3 treatments by 55.1 and 86.4 %. The amounts of SOC stock expressed as a percentage of total C applied to the soil were higher from 10 Mg ha^?1 compost (28.7 %) than that from 6 Mg ha^?1 rice straw (17.4 %), indicating a more effective soil organic C accumulation from rice straw compost than that from original rice straw.

     

Soil nutrient status and yield of rice as affected by long-term integrated use of organic and inorganic fertilizers

Nutrient balance is the key component to increase crop yields. Excess and imbalanced use of nutrients has caused nutrient mining from the soil and deteriorated crop productivity and ultimately soil health. Replenishment of these nutrients has a direct impact on soil health and crop productivity. Based on this fact, the present research was conducted to determine the effects of long-term integrated use of organic and inorganic fertilizers on soil nutrient status and yield (grain and straw) in rice. Different combinations of inorganic nitrogen (N) and organic sources (sewage sludge and compost) were applied to the soil. Data revealed that application of mineral NPK in combination with 50% N through compost significantly increased the organic matter content (0.36%), available phosphorus (16.50 kg/ha) and available potassium content (239.80 kg/ha) in soil. The maximum available N (225.12 kg/ha) was found by the substitution of 50% N through sewage sludge. This improvement in soil nutrient status through combined use of organic and inorganic fertilizers produced significant increase in grain and straw yield as compared to inorganic fertilizers alone. Maximum grain (6.96 t/ha) and straw (8.56 t/ha) yields were found in treatment having substitution of 50% N (recommended) through compost @10t/ha. Also, a significant positive correlation was found between soil nutrients and straw and grain yield in rice. Thus the study demonstrated that substitution of 50% inorganic N through compost will be a good alternative for improving soil fertility.     

Use of mineralization kinetics to estimate the potentially mineralizable nitrogen of rock phosphate-enriched composts-amended soil

Predicting nitrogen (N) mineralization has been one of the greatest challenges to improving N management in agriculture. A laboratory incubation experiment was conducted to study the N mineralization of soil amended with rock phosphate (RP)-enriched composts. The RP-enriched rice straw compost amended soil mineralized highest N as compared to compost prepared from mustard stover and tree leaves. The first-order model was found to be the most suitable for N because it provided the best fit to the experimental data and for its simplicity. The model predicted that potentially mineralized N (N₀) was varied from 4.0 to 52.1 mg kg^?1 and the mineralization rate k varied from 0.015 to 0.066 day^?1. The rice straw compost amended soil had higher N₀ value than mustard stover and tree leaves compost amended soil. This study demonstrated the importance of application of rock phosphate-enriched composts in improving N supplying capacity of soil.